mRNA_Ecto-sp13_S_contig75417.18730.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: A0A6H5JY87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY87_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.020e-35 Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 1
Query: 1 FRQIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERGEM 201
FRQIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGF+YDPEHFSRGLV+DLERG +
Sbjct: 193 FRQIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFIYDPEHFSRGLVVDLERGNI 259
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: D7FMF3_ECTSI (5'-nucleotidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF3_ECTSI) HSP 1 Score: 132 bits (332), Expect = 1.420e-34 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 1
Query: 7 QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERG 195
QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGF+YDPEHFSRGLVIDLERG
Sbjct: 146 QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFVYDPEHFSRGLVIDLERG 208
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: A0A835Z4H4_9STRA (5'-nucleotidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H4_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.160e-23 Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 4 RQIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERGEM 201
+QIKAVGFDMDYTLAQYF AFD LAF+GAKEKLV LGYP V F YDP +F+RGLVID +RG +
Sbjct: 34 KQIKAVGFDMDYTLAQYFPAFDLLAFEGAKEKLVHKLGYPSQVLEFDYDPNYFTRGLVIDKQRGNI 99
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: A0A0G4H1H6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H1H6_9ALVE) HSP 1 Score: 93.2 bits (230), Expect = 1.370e-20 Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 7 QIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERG 195
QIKAVGFDMD+TLAQY TAFD+LA++GAK+KLV+ +GYP++V GF YDP F RGL++D + G
Sbjct: 169 QIKAVGFDMDFTLAQYTTAFDELAYEGAKKKLVEIMGYPEEVLGFRYDPTLFRRGLLVDKQLG 231
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: A0A8J9T4I3_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T4I3_PHATR) HSP 1 Score: 86.7 bits (213), Expect = 2.180e-20 Identity = 42/63 (66.67%), Postives = 52/63 (82.54%), Query Frame = 1
Query: 10 IKAVGFDMDYTLAQYFT-AFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERG 195
+KAVGFDMDYTLAQY AFDQLAFDGAK KLV ++GYP++V F YD +++RGL+ID +RG
Sbjct: 14 VKAVGFDMDYTLAQYKEPAFDQLAFDGAKAKLVYNMGYPKEVLEFEYDHRYWARGLIIDTQRG 76
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: A0A7S1U7H3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H3_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.150e-19 Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 4 RQIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERG 195
RQI A+GFDMD+TLAQY TAFD LAF+GAKEKLV ++GYP+ V F YD + F+RGL+ID G
Sbjct: 90 RQIDAIGFDMDFTLAQYETAFDLLAFEGAKEKLVTEMGYPEAVRDFKYDADTFTRGLIIDKAAG 153
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: A0A1Z5JYK9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYK9_FISSO) HSP 1 Score: 89.0 bits (219), Expect = 4.170e-19 Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 10 IKAVGFDMDYTLAQYF-TAFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERG 195
I+A+GFDMDYTLAQY T F +LAFDGAK KLV+ LGYP++V F YDP H+ RGL+ID +RG
Sbjct: 95 IQAIGFDMDYTLAQYNETTFAELAFDGAKRKLVESLGYPEEVLDFTYDPAHWVRGLIIDTQRG 157
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: A0A7S2WFZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WFZ8_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 9.270e-19 Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 10 IKAVGFDMDYTLAQYFTA-FDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERG 195
++A+GFDMDYTLAQY FD+LAFDGAK+KLV +LGYP+ V F YD E + RGL+ID +RG
Sbjct: 24 VRAIGFDMDYTLAQYKQPEFDKLAFDGAKQKLVDELGYPKKVLDFEYDHEFWVRGLIIDTQRG 86
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: A0A7R9YB24_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB24_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.650e-18 Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 4 RQIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERG 195
RQ+ VGFDMD+TLAQY TAFD LAF+GAK+KL + GYP++V F YD +SRGL+ID RG
Sbjct: 73 RQLDVVGFDMDHTLAQYETAFDLLAFEGAKDKLHTEYGYPEEVLDFHYDASTYSRGLIIDKARG 136
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Match: W7T4C7_9STRA (Imp-gmp specific 5 nucleotidase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4C7_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.990e-18 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 4 RQIKAVGFDMDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIDLERGEM 201
+QI+A+GFDMDYTLAQY AF+ LA+DGAK+KLV YP+ V F YD +F RGLVID ERG +
Sbjct: 92 QQIRAIGFDMDYTLAQYNLAFELLAYDGAKQKLVDTFRYPEAVASFEYDSTYFRRGLVIDKERGNV 157 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig75417.18730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig75417.18730.1 >prot_Ecto-sp13_S_contig75417.18730.1 ID=prot_Ecto-sp13_S_contig75417.18730.1|Name=mRNA_Ecto-sp13_S_contig75417.18730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp MDYTLAQYFTAFDQLAFDGAKEKLVKDLGYPQDVDGFMYDPEHFSRGLVIback to top mRNA from alignment at Ecto-sp13_S_contig75417:26..226- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig75417.18730.1 ID=mRNA_Ecto-sp13_S_contig75417.18730.1|Name=mRNA_Ecto-sp13_S_contig75417.18730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=201bp|location=Sequence derived from alignment at Ecto-sp13_S_contig75417:26..226- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig75417:26..226- >mRNA_Ecto-sp13_S_contig75417.18730.1 ID=mRNA_Ecto-sp13_S_contig75417.18730.1|Name=mRNA_Ecto-sp13_S_contig75417.18730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=171bp|location=Sequence derived from alignment at Ecto-sp13_S_contig75417:26..226- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |