prot_Ecto-sp13_S_contig75412.18729.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig75412.18729.1
Unique Nameprot_Ecto-sp13_S_contig75412.18729.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length69
Homology
BLAST of mRNA_Ecto-sp13_S_contig75412.18729.1 vs. uniprot
Match: D7G5L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L8_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 2.090e-33
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
Query:    7 RCEEFAQAIGGLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEGHYVTTLPDDMFNLINMQV 68
            RCEEFAQAIGGLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEGHYVTTLPDDMFNLINMQ+
Sbjct:  358 RCEEFAQAIGGLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEGHYVTTLPDDMFNLINMQI 419          
BLAST of mRNA_Ecto-sp13_S_contig75412.18729.1 vs. uniprot
Match: A0A6H5KMB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB3_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 3.560e-32
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0
Query:    7 RCEEFAQAIGGLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEGHYVTTLPDDMFNLINMQV 68
            RCEEFAQAI GLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEGHYVTTLPDDMFNLINMQ+
Sbjct:  195 RCEEFAQAINGLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEGHYVTTLPDDMFNLINMQI 256          
BLAST of mRNA_Ecto-sp13_S_contig75412.18729.1 vs. uniprot
Match: A0A835YNU2_9STRA (Exocyst complex component Sec6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU2_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.350e-14
Identity = 34/60 (56.67%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    9 EEFAQAIGGLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEGHYVTTLPDDMFNLINMQV 68
            ++FA+AI  LN+ YL RIKAQI+KWV NL+AQ  E+   ++G ++TT PDDMFNL+N+Q+
Sbjct:  378 DKFAKAIVDLNSMYLKRIKAQIMKWVHNLKAQEPELIQSSDGKWLTTFPDDMFNLVNVQI 437          
BLAST of mRNA_Ecto-sp13_S_contig75412.18729.1 vs. uniprot
Match: F0Y5W6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5W6_AURAN)

HSP 1 Score: 53.5 bits (127), Expect = 1.380e-6
Identity = 31/69 (44.93%), Postives = 38/69 (55.07%), Query Frame = 0
Query:    1 LRRRPPRCEEFAQAIGGLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEGHYVTTLPDDMFNLINMQVG 69
            LR R P  + FA A   L   YL RI  Q+  W   +RA+  E + D  G  VTT P+DMF +I MQVG
Sbjct:  556 LRPRGP-AKAFATAGAFLMGEYLDRIAKQVESWFVAIRARKAEPRADPAGRLVTTRPEDMFQVITMQVG 623          
BLAST of mRNA_Ecto-sp13_S_contig75412.18729.1 vs. uniprot
Match: A0A8J2SHR9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHR9_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.320e-5
Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 0
Query:   11 FAQAIGGLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEGHYVTTLPDDMFNLINMQV 68
            F +A   L A YL R+  Q+  W  N+RA+    +LD  G  VTT P+DMF ++ +QV
Sbjct:  616 FNEAAEKLMAQYLARVGDQVEGWFGNIRAKKAAPRLDEHGRPVTTRPEDMFQIVQLQV 673          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig75412.18729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G5L8_ECTSI2.090e-3398.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMB3_9PHAE3.560e-3296.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNU2_9STRA1.350e-1456.67Exocyst complex component Sec6-domain-containing p... [more]
F0Y5W6_AURAN1.380e-644.93Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2SHR9_9STRA2.320e-541.38Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig75412contigEcto-sp13_S_contig75412:208..414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig75412.18729.1mRNA_Ecto-sp13_S_contig75412.18729.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig75412 208..414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig75412.18729.1 ID=prot_Ecto-sp13_S_contig75412.18729.1|Name=mRNA_Ecto-sp13_S_contig75412.18729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp
LRRRPPRCEEFAQAIGGLNAAYLTRIKAQIIKWVQNLRAQHLEVQLDAEG
HYVTTLPDDMFNLINMQVG
back to top