prot_Ecto-sp13_S_contig7541.18728.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7541.18728.1
Unique Nameprot_Ecto-sp13_S_contig7541.18728.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length374
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7541.18728.1 vs. uniprot
Match: D8LIA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA8_ECTSI)

HSP 1 Score: 530 bits (1365), Expect = 2.660e-180
Identity = 289/373 (77.48%), Postives = 302/373 (80.97%), Query Frame = 0 
Query:    1 MNASELPVHYHDVVGVAVVIGDAGYQPQEVFRYPFFNEDPARRSLGRFDRIPPEILTKLLKTTFSGSGLSGELLEIVFDDVRLISRPVNLFRGGGDERTEMFFSLVFVVSSEYYPRRQLYPPSRLPKRPRRKEMNSTAPPPGTITADASDEGGGARGLGEDFEMSASGPAEGQGDGEWGAVEAKEEEAWGGEEEGGLWPGRAGSERERGHGVDLALLRGAVMMVSRAMGHEEWKNGYISREVKHLLEKKDRRTGDTEKFIADMKKFFDMRDDALNNGTDLYMNFGGRLYGDARQYSPDEMKARGDERWQESVMQQENQLAQDMRKLYDGLTRGKPFEMKIKRSSELSINVTVQAEIPATRRFETLILREERHM 373
            MNAS+LPVHYHDVVGVAV+I                  DPARRSLG FDRIPP+ILTKLLKTTFSGSGLSGELLEIVFDD+ LISRPVNLFRGGGD+RTEMFFSLVFVVS                               G   ADA DEGGG RGLGEDFEMSASGPAEG G+ EWGAVEAKEEEA G EEEGGLWPG AGSERER HG +LALLRGAVMMVSRAMGHEEWKNGYISREVKHLL+KKDRRTGDTEKFIADM+KF DM DD L NGT LYMNFGGRLYG ARQYSPDEMKARGDERWQESVMQ ENQLAQD+R LYDGLTRG+PFEMKIKRSSELSINVTVQAEIPATRR+ETLILREERH+
Sbjct:    1 MNASDLPVHYHDVVGVAVII------------------DPARRSLGHFDRIPPKILTKLLKTTFSGSGLSGELLEIVFDDIHLISRPVNLFRGGGDDRTEMFFSLVFVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTAADAPDEGGGVRGLGEDFEMSASGPAEGDGNAEWGAVEAKEEEALGREEEGGLWPGAAGSERERDHGANLALLRGAVMMVSRAMGHEEWKNGYISREVKHLLDKKDRRTGDTEKFIADMEKFIDMHDDTLYNGTGLYMNFGGRLYGGARQYSPDEMKARGDERWQESVMQ-ENQLAQDVRTLYDGLTRGEPFEMKIKRSSELSINVTVQAEIPATRRYETLILREERHI 354
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BLAST of mRNA_Ecto-sp13_S_contig7541.18728.1 vs. uniprot
Match: A0A6H5K0B6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B6_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 5.390e-83
Identity = 141/152 (92.76%), Postives = 147/152 (96.71%), Query Frame = 0 
Query:  222 MMVSRAMGHEEWKNGYISREVKHLLEKKDRRTGDTEKFIADMKKFFDMRDDALNNGTDLYMNFGGRLYGDARQYSPDEMKARGDERWQESVMQQENQLAQDMRKLYDGLTRGKPFEMKIKRSSELSINVTVQAEIPATRRFETLILREERHM 373
            MMVSRAMGHEEWKNGYISREVKHLLEKKDRRTGDTEKFIADM+KF DMRDDAL NGT LYMNFGGRL+G ARQYSPDEMKARGDERWQESVM+ ENQLAQDMRKLYDGLTRG+PFEMKIKRSSELSINVTVQAEIPATRR+ETLILREERH+
Sbjct:    1 MMVSRAMGHEEWKNGYISREVKHLLEKKDRRTGDTEKFIADMEKFIDMRDDALYNGTGLYMNFGGRLHGGARQYSPDEMKARGDERWQESVME-ENQLAQDMRKLYDGLTRGRPFEMKIKRSSELSINVTVQAEIPATRRYETLILREERHI 151
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7541.18728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIA8_ECTSI2.660e-18077.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0B6_9PHAE5.390e-8392.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005365Nitrogen permease regulator 3PANTHERPTHR13153CGTHBA PROTEIN -14 GENE PROTEINcoord: 50..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7541contigEcto-sp13_S_contig7541:744..7026 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7541.18728.1mRNA_Ecto-sp13_S_contig7541.18728.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7541 744..7258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7541.18728.1 ID=prot_Ecto-sp13_S_contig7541.18728.1|Name=mRNA_Ecto-sp13_S_contig7541.18728.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp
MNASELPVHYHDVVGVAVVIGDAGYQPQEVFRYPFFNEDPARRSLGRFDR
IPPEILTKLLKTTFSGSGLSGELLEIVFDDVRLISRPVNLFRGGGDERTE
MFFSLVFVVSSEYYPRRQLYPPSRLPKRPRRKEMNSTAPPPGTITADASD
EGGGARGLGEDFEMSASGPAEGQGDGEWGAVEAKEEEAWGGEEEGGLWPG
RAGSERERGHGVDLALLRGAVMMVSRAMGHEEWKNGYISREVKHLLEKKD
RRTGDTEKFIADMKKFFDMRDDALNNGTDLYMNFGGRLYGDARQYSPDEM
KARGDERWQESVMQQENQLAQDMRKLYDGLTRGKPFEMKIKRSSELSINV
TVQAEIPATRRFETLILREERHM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005365Npr3