mRNA_Ecto-sp13_S_contig75385.18724.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: D7FRQ6_ECTSI (Putative methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ6_ECTSI) HSP 1 Score: 321 bits (823), Expect = 1.390e-107 Identity = 164/213 (77.00%), Postives = 168/213 (78.87%), Query Frame = 1
Query: 1 DVHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKR-------------------------------------------KKGNHDNRLREPLPKNLLLLRADLVDLWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 510
DVHPD ASVAVKHALQLPRFLHHYPISSHTQAAYRHAV+FVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKR KKGN DNRLREPLP+NLLLLRADLVDLW+LASR+NAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP
Sbjct: 9 DVHPDAASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRVEEHMHQHNSSTRQAGAEQGRNDRVDARRAHGSSGEKNRPPLQKKGNRDNRLREPLPENLLLLRADLVDLWILASRENAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 221
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: A0A0B4XNW9_9GAMM (Methyltransferase n=2 Tax=Alcanivorax TaxID=59753 RepID=A0A0B4XNW9_9GAMM) HSP 1 Score: 130 bits (328), Expect = 7.300e-35 Identity = 75/169 (44.38%), Postives = 98/169 (57.99%), Query Frame = 1
Query: 7 HPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRKKGNHDNRLR-EPLPKNLLLLRADLVDLWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 510
H +A+V V+H R P+++HT+AA+ A ++ A Q + P+VLDSGCGTGRSSV LA YP VIG+D+S RL +G LR +PLP NLLLLRA+ D W LA + W ++EH + YPNP+PK + LR RWHGH VFP
Sbjct: 16 HEQLAAVVVRHLAHPWRA----PVAAHTRAAFAEAADWRAA---------QGADRPLVLDSGCGTGRSSVWLAGHYPEALVIGLDQSGERLRRG--------------HLRFDPLPANLLLLRAEAADFWRLAV-EAGWRVREHCLFYPNPWPKSAHLRRRWHGHPVFP 156
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: UPI001CBC5452 (SAM-dependent methyltransferase n=1 Tax=Alcanivorax limicola TaxID=2874102 RepID=UPI001CBC5452) HSP 1 Score: 124 bits (312), Expect = 1.570e-32 Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 1
Query: 73 PISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRKKGNHDNRLREPLPKNLLLLRADLVDLWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 510
P++ HT+AA+ A+ ++ +R PV+LDSGCGT RSS LA +P VIGID+SA RL++G DAG LP NLLLLRA+ D W LA + W + HY+LYPNP+PK + L+ RWHGH VFP
Sbjct: 34 PVAEHTRAAFAEALAWLA----------ERQDAPVILDSGCGTARSSRWLAAQHPGAAVIGIDQSAHRLARGR-DAG-------------ALPDNLLLLRAECADFWRLAE-EGGWRLMAHYLLYPNPWPKAAHLKRRWHGHPVFP 154
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: A0A4V2L0H3_9ALTE (SAM-dependent methlyltransferase n=1 Tax=Bowmanella sp. JS7-9 TaxID=1605368 RepID=A0A4V2L0H3_9ALTE) HSP 1 Score: 124 bits (310), Expect = 3.050e-32 Identity = 72/167 (43.11%), Postives = 93/167 (55.69%), Query Frame = 1
Query: 7 HPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRKKGNHDNRLREPLPKNLLLLRADLVDLWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVF 507
HPDVA V +H L P P+S HT A+ A E++ + ++LD+ CG G S+ LA+ +PH VIGID+SA RL K G G+ P N LLLRAD+ D W LA + N W+I +HY+LYPNPYPK+SQL+ RWHGH F
Sbjct: 17 HPDVAKVVARH-LAHPN---QKPVSEHTLQAFEQAGEWLADWQGD-----------LILDACCGIGESTHRLAKLHPHARVIGIDKSAHRLDKHTGHFGE-------------APANALLLRADVGDFWRLAKQAN-WQISQHYLLYPNPYPKKSQLQKRWHGHPAF 154
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: UPI000DBA2FDA (methyltransferase domain-containing protein n=1 Tax=Alcanivorax indicus TaxID=2202653 RepID=UPI000DBA2FDA) HSP 1 Score: 123 bits (309), Expect = 4.090e-32 Identity = 69/169 (40.83%), Postives = 96/169 (56.80%), Query Frame = 1
Query: 4 VHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRKKGNHDNRLREPLPKNLLLLRADLVDLWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 510
+H D+ V +H R P+++HT+AA+ A + + SP P++LDSGCGTGRSS LLA+ +P VIG+D+SA RL++ G P NLLLLRA+ D W LA + W+++ HY+LYPNP+PK + L+ RWHGH VFP
Sbjct: 15 IHEDLERVVKRHLSSAWRA----PVAAHTRAAFAEADAW---YRASPGA-------PLILDSGCGTGRSSRLLAQRHPEARVIGLDQSAHRLARSGSG-----------------PDNLLLLRAECADFWRLAE-EAGWQLEAHYLLYPNPWPKAAHLKRRWHGHPVFP 151
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: A0A316BS23_9BACT (tRNA G46 methylase TrmB n=1 Tax=Fibrobacter sp. UWR4 TaxID=1896218 RepID=A0A316BS23_9BACT) HSP 1 Score: 124 bits (312), Expect = 4.230e-32 Identity = 69/173 (39.88%), Postives = 100/173 (57.80%), Query Frame = 1
Query: 1 DVHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRKKGNHDNRLREPLPKNLLLLRADLVDLWVLASRDNA---WEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 510
D++ ++ V K+A RFL P++ HT+ A+ A +FV F++ E S L V+LDSGCGTG S++ LAR +P +PVIGID+SA+RLSK G + + D + P N +R +L+D W LA + W I H + YPNP+PK S+ R+H H +FP
Sbjct: 13 DLYKNLEQVVRKYAAT--RFLR--PVADHTREAFESAKQFVQNFYQGHPELVSGSALAVILDSGCGTGESTLHLARRFPGVPVIGIDKSAIRLSKAGNVHQLEQPTSGDLGMTGSSPSNAFWVRGELLDFWRLALEEQQAGRWHILHHAVFYPNPWPKESEATRRFHLHPIFP 181
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: UPI00100A59A6 (SAM-dependent methyltransferase n=2 Tax=Halomonadaceae TaxID=28256 RepID=UPI00100A59A6) HSP 1 Score: 123 bits (308), Expect = 7.270e-32 Identity = 69/146 (47.26%), Postives = 85/146 (58.22%), Query Frame = 1
Query: 73 PISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRKKGNHDNRLREPLPKNLLLLRADLVDLWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 510
PI+ HT+ A+ A ++ A R P++LD+GCG G SS LAR +P VIGIDRSA RL++ G+ LP N LL+RADLVD W LA + W HY+LYPNPYPK SQL+ RWHGHSVFP
Sbjct: 34 PIADHTRDAFARARDWFAAQDR-----------PLILDAGCGVGLSSRELARRHPGHAVIGIDRSADRLARDHGE----------------LPDNALLVRADLVDFWRLALAEG-WRPSHHYLLYPNPYPKASQLKLRWHGHSVFP 151
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: A0A139CFI5_9GAMM (Methyltransferase n=3 Tax=Halomonadaceae TaxID=28256 RepID=A0A139CFI5_9GAMM) HSP 1 Score: 122 bits (306), Expect = 1.380e-31 Identity = 71/160 (44.38%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 40 ALQLPRFLHH---YPISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRKKGNHDNRLREPLPKNLLLLRADLVDLWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 510
A ++ R L+H PI+ HT+ A+ A +++ A R P++LD+GCG G S+ LA +P VIGIDRSA RL + G PLP N LL+RADLVD W LA W+ + HY+LYPNPYPK SQL+ RWHGH VFP
Sbjct: 20 ARRVARALNHPWRKPIADHTRLAFERAQDWLAAQGR-----------PLLLDAGCGVGLSTRALAARHPDRAVIGIDRSAARLEREHG----------------PLPDNALLVRADLVDFWRLAL-GAGWQPERHYLLYPNPYPKASQLKLRWHGHPVFP 151
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: UPI000362CCDA (methyltransferase domain-containing protein n=1 Tax=Kushneria aurantia TaxID=504092 RepID=UPI000362CCDA) HSP 1 Score: 122 bits (307), Expect = 1.420e-31 Identity = 76/170 (44.71%), Postives = 98/170 (57.65%), Query Frame = 1
Query: 1 DVHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRKKGNHDNRLREPLPKNLLLLRADLVDLWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 510
DVHPD+A V+ AL+ P P+++H + A+ A++F + R E ++LD+GCGTG S+ LA+ YP VIGIDRSA RLS+ AG LP N LLLRADLVD W LA + + H++LYPNPYPK SQL+ RWH H VFP
Sbjct: 14 DVHPDLAG-RVRRALESPW---QRPLAAHNREAFAQALDF---YRRCGGE--------LILDAGCGTGLSTRQLAQRYPEACVIGIDRSAERLSRQADAAG-------------ALPGNALLLRADLVDFWRLALAHDLCPAR-HFLLYPNPYPKASQLKRRWHAHPVFP 154
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Match: A0A1B8NXT3_HALEL (SAM-dependent methyltransferase n=6 Tax=Halomonas TaxID=2745 RepID=A0A1B8NXT3_HALEL) HSP 1 Score: 122 bits (305), Expect = 2.100e-31 Identity = 68/160 (42.50%), Postives = 89/160 (55.62%), Query Frame = 1
Query: 31 VKHALQLPRFLHHYPISSHTQAAYRHAVEFVLAFHRSPQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRKKGNHDNRLREPLPKNLLLLRADLVDLWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFP 510
V+ ALQ P P++ HT+ A F R+ + R +P++LD+GCG G S+ LA ++P VIG+DRSA RLS+ G PLP N LL+RADLVD W LA + W+ HY+LYPNPYPK L+ RWHGH +FP
Sbjct: 23 VERALQHPL---RKPVAEHTREA----------FERAEHWRGARERMPLILDAGCGVGLSTRRLASAHPECAVIGVDRSAERLSRDHG----------------PLPDNALLVRADLVDFWRLALAEG-WQPARHYLLYPNPYPKSVHLKMRWHGHPIFP 152 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig75385.18724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig75385.18724.1 >prot_Ecto-sp13_S_contig75385.18724.1 ID=prot_Ecto-sp13_S_contig75385.18724.1|Name=mRNA_Ecto-sp13_S_contig75385.18724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=170bp DVHPDVASVAVKHALQLPRFLHHYPISSHTQAAYRHAVEFVLAFHRSPQEback to top mRNA from alignment at Ecto-sp13_S_contig75385:13..651+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig75385.18724.1 ID=mRNA_Ecto-sp13_S_contig75385.18724.1|Name=mRNA_Ecto-sp13_S_contig75385.18724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=639bp|location=Sequence derived from alignment at Ecto-sp13_S_contig75385:13..651+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig75385:13..651+ >mRNA_Ecto-sp13_S_contig75385.18724.1 ID=mRNA_Ecto-sp13_S_contig75385.18724.1|Name=mRNA_Ecto-sp13_S_contig75385.18724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=510bp|location=Sequence derived from alignment at Ecto-sp13_S_contig75385:13..651+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |