prot_Ecto-sp13_S_contig7531.18718.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7531.18718.1
Unique Nameprot_Ecto-sp13_S_contig7531.18718.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: D8LCQ4_ECTSI (SHQ1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ4_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 5.120e-24
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR 49
            M ATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR
Sbjct:    1 MPATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR 49          
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: A0A6H5J6M6_9PHAE (SHQ1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6M6_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.290e-23
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR 49
            M ATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGT+FSFYCKPYLLR
Sbjct:    1 MPATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTDFSFYCKPYLLR 49          
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: A0A835YXH0_9STRA (SHQ1 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH0_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.860e-12
Identity = 34/51 (66.67%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHV--DGTEFSFYCKPYLLR 49
            M  TPRF V QTD  V V I+VPHIRV +AETHV  DG   SFYCKPYLL+
Sbjct:    1 MPVTPRFSVEQTDDFVCVTIRVPHIRVSAAETHVEEDGCGVSFYCKPYLLK 51          
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: A0A397ECD5_9STRA (CS domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ECD5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.250e-11
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLL 48
            M +TPRF V+Q D  V V I VP++RV   E H+DGT F+F+CKPYLL
Sbjct:    1 MPSTPRFTVTQDDKMVYVEIHVPYVRVTEMEYHIDGTSFTFWCKPYLL 48          
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: A0A6G0XW87_9STRA (CS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW87_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 9.540e-11
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLL 48
            M +TPRFKV+Q    V V I VP++RV   E H+DGT FSF+CKPYLL
Sbjct:    1 MPSTPRFKVTQDATTVFVEIHVPYVRVSEMEYHIDGTNFSFWCKPYLL 48          
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: A0A024GSK1_9STRA (CS domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSK1_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.310e-10
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR 49
            M +TPRF+V+Q    V V I+VP++RV   E H+DG +F+FYCKPYLL+
Sbjct:    1 MPSTPRFRVTQNAQFVYVHIRVPYVRVSDMEFHIDGPDFTFYCKPYLLK 49          
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: G4ZMP3_PHYSP (CS domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZMP3_PHYSP)

HSP 1 Score: 60.5 bits (145), Expect = 4.240e-10
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR 49
            M+ATPRF V+Q    V V + VP +RV   E +VDG +F+FYCKPYLL+
Sbjct:    1 MVATPRFHVTQDAAWVFVHVHVPFVRVSEMEFYVDGLDFTFYCKPYLLK 49          
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: F0WR50_9STRA (Uncharacterized protein AlNc14C208G8858 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WR50_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.250e-10
Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR 49
            M +TPRF+V+Q    V V I+VP++RV   E ++DG++F+FYCKPYLL+
Sbjct:    1 MPSTPRFRVTQNAQFVYVHIRVPYVRVSDMEFNIDGSDFTFYCKPYLLK 49          
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: A0A0P1AHJ9_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHJ9_PLAHL)

HSP 1 Score: 61.2 bits (147), Expect = 1.160e-9
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR 49
            M+ATP+F V+Q    V V + VP++RV   E +VDG +F+FYCKPYLL+
Sbjct:    1 MVATPKFHVTQDTTWVFVHVHVPYVRVSDMEFYVDGVDFTFYCKPYLLK 49          
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Match: D0P2M6_PHYIT (CS domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P2M6_PHYIT)

HSP 1 Score: 57.0 bits (136), Expect = 2.840e-9
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    1 MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR 49
            M+ATPRF V+Q    V V + VP +RV   E +VD  +F+F+CKPYLL+
Sbjct:    1 MVATPRFHVTQDAAWVFVHVHVPFVRVSDMEFYVDNVDFTFFCKPYLLK 49          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7531.18718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCQ4_ECTSI5.120e-2497.96SHQ1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5J6M6_9PHAE1.290e-2395.92SHQ1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YXH0_9STRA7.860e-1266.67SHQ1 protein-domain-containing protein n=1 Tax=Tri... [more]
A0A397ECD5_9STRA1.250e-1158.33CS domain-containing protein n=2 Tax=Aphanomyces a... [more]
A0A6G0XW87_9STRA9.540e-1160.42CS domain-containing protein n=1 Tax=Aphanomyces e... [more]
A0A024GSK1_9STRA1.310e-1055.10CS domain-containing protein n=1 Tax=Albugo candid... [more]
G4ZMP3_PHYSP4.240e-1055.10CS domain-containing protein (Fragment) n=1 Tax=Ph... [more]
F0WR50_9STRA6.250e-1053.06Uncharacterized protein AlNc14C208G8858 n=1 Tax=Al... [more]
A0A0P1AHJ9_PLAHL1.160e-953.06Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]
D0P2M6_PHYIT2.840e-951.02CS domain-containing protein n=1 Tax=Phytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 1..49
e-value: 3.5E-16
score: 60.6
IPR039742Protein Shq1PANTHERPTHR12967UNCHARACTERIZEDcoord: 3..49
NoneNo IPR availablePANTHERPTHR12967:SF0PROTEIN SHQ1 HOMOLOGcoord: 3..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7531contigEcto-sp13_S_contig7531:4207..4356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7531.18718.1mRNA_Ecto-sp13_S_contig7531.18718.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7531 4207..4356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7531.18718.1 ID=prot_Ecto-sp13_S_contig7531.18718.1|Name=mRNA_Ecto-sp13_S_contig7531.18718.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
MLATPRFKVSQTDLAVVVCIKVPHIRVGSAETHVDGTEFSFYCKPYLLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR039742Shq1