mRNA_Ecto-sp13_S_contig7530.18716.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7530.18716.1
Unique NamemRNA_Ecto-sp13_S_contig7530.18716.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: D7FIL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIL7_ECTSI)

HSP 1 Score: 585 bits (1507), Expect = 4.700e-208
Identity = 291/304 (95.72%), Postives = 297/304 (97.70%), Query Frame = 1
Query:    1 GSRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRPPDLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMRLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIFAHKEGTSSSTRSACSPASASSSYQRR 912
            G+RMTSVSWINETD SLLLTAAGDGVVRVWGDVMEAGADEGR PDLVTAFRALPDLEQ+PGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKM RLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDK MP+HCKAQQTAMTCI MHPRVPVLATGSHKQFINIITPRGDLMSRIKEH+GFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIFAHKEGTSSST+SA SPASASS +QRR
Sbjct:  164 GTRMTSVSWINETDISLLLTAAGDGVVRVWGDVMEAGADEGRSPDLVTAFRALPDLEQNPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMNRLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKFMPHHCKAQQTAMTCITMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHSGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIFAHKEGTSSSTKSAYSPASASS-HQRR 466          
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: A0A6H5KBF0_9PHAE (Raptor_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF0_9PHAE)

HSP 1 Score: 593 bits (1530), Expect = 3.990e-194
Identity = 295/304 (97.04%), Postives = 297/304 (97.70%), Query Frame = 1
Query:    1 GSRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRPPDLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMRLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIFAHKEGTSSSTRSACSPASASSSYQRR 912
            G+RMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGR PDLVTAFRALPDLEQD GGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMRLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDK MPYHCKAQQTAMTCI MHPRVPVLATGSHKQFINIITPRGDL+SRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIFAHKEGTSSSTRSA SP S SSSYQRR
Sbjct: 1795 GTRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRSPDLVTAFRALPDLEQDQGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMRLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKFMPYHCKAQQTAMTCITMHPRVPVLATGSHKQFINIITPRGDLLSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIFAHKEGTSSSTRSAYSPVS-SSSYQRR 2097          
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: A0A836CAT4_9STRA (Raptor_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAT4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 7.840e-59
Identity = 121/289 (41.87%), Postives = 165/289 (57.09%), Query Frame = 1
Query:    1 GSRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRPPDLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAP--------SDNSPGPLG--GWMIAAGMTDGNVLLYDARERGVSAVHKMMRLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIFA 837
            G+RMT++ W+N    SLLL  + DGVVR+W  ++E GA     P LV+AF A PD+     G GL THWQQ  GLL   G+S  L VWD+  EQ W QW       V+AL AP              PLG     + AG  DG + LYD RE G           +++V L F     GH++L+  + G +   DIR A    +M      Q++ MT +A H RVP+LA+GSH QFI ++T  G+ ++ I+ H GF  QR+G V+ALAFHP++L+LAAGA+D +VS++A
Sbjct: 1361 GARMTALHWLNPAARSLLLVGSDDGVVRIWDGLVEGGA-----PRLVSAFAAAPDIVPGQRGSGLVTHWQQSTGLLYCGGSSARLRVWDVAREQAWAQWPAAPGGCVTALAAPLTAELRGGXXXXXAPLGDAAGAVVAGHGDGAIRLYDPRE-GTRPCRAFAEHGSWIVSLHFTRGMGGHEMLSACAAGDVRFWDIRMAGSLSAM----SVQRSPMTALAAHARVPILASGSHNQFIKVLTLDGETLAVIRYHDGFLGQRIGPVSALAFHPHRLVLAAGATDSIVSVYA 1639          
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: A0A7S4QVF6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QVF6_9STRA)

HSP 1 Score: 171 bits (432), Expect = 5.100e-45
Identity = 109/306 (35.62%), Postives = 162/306 (52.94%), Query Frame = 1
Query:    4 SRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRP-PDLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDN-------SPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMM-----------RLRN----------YVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIF 834
            SR+TS+SWINE   SLLLT + DGVVR+W  ++E   +  +  P L +AF A P+L +     GL T WQQ  G L A G +  +  WD+ +E+   + E      V+ L    D+           +G  +I AG  DGN+ ++D R    SAV  +            R RN          ++VD FF   G  +++++G   G I   D+R +S  +++      Q++ MT +A H  +P+LATGSH QFI I+   GD +  I+ H     QR+G V+ L+FHP+K LLAAGA+D +VS++
Sbjct:  309 SRITSISWINEMSTSLLLTGSDDGVVRIWEGLIEFNGEISQDKPTLCSAFFAAPELAKSAKRSGLVTDWQQFTGRLIAGGNTSLIRCWDLEAEKCCVELENRSDACVTTLTTAWDHVNLGDGRGNSGIGPDIIVAGYGDGNLKVFDIRSNQRSAVRNLSNGGRKNSPPNRRRRNKLMEYAEHSSWIVDTFFTGFGGRYEVVSGCVGGDIKFWDLRMSSSLRTLD----VQRSPMTALACHSTIPLLATGSHAQFIKILAFEGDTLQVIRYHEEIAGQRIGPVSCLSFHPHKPLLAAGATDEIVSLY 610          
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: A0A7S1YZH6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZH6_9STRA)

HSP 1 Score: 168 bits (425), Expect = 3.560e-43
Identity = 109/313 (34.82%), Postives = 162/313 (51.76%), Query Frame = 1
Query:    4 SRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRP-PDLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDN-------SPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMM------------------RLRN----------YVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIF 834
            SR+TS+SWINE   SLLLT + DGVVR+W  ++E   +  +  P L +AF A P+L +     GL T WQQ  G L A G +  +  WD+ +E+   + E      V+ L    D+           +G  +I AG  DGN+ ++D R    SAV  +                   R RN          ++VD FF   G  +++++G   G I   D+R +S  +++      Q++ MT +A H  +P+LATGSH QFI I+   GD +  I+ H     QR+G V+ L+FHP+K LLAAGA+D +VS++
Sbjct:  641 SRITSISWINEMSTSLLLTGSDDGVVRIWEGLIEFNGEISQDKPTLCSAFFAAPELAKSAKRSGLVTDWQQFTGRLIAGGNTSLIRCWDLEAEKCCVELENRSDACVTTLTTAWDHVNLGDGRGNSGIGPDIIVAGYGDGNLKVFDIRSNQRSAVRNLSNGGNRSPRSGRKNSPPNRRRRNKLMEYAEHSSWIVDTFFTGFGGRYEVVSGCVGGDIKFWDLRMSSSLRTLD----VQRSPMTALACHSTIPLLATGSHAQFIKILAFEGDTLQVIRYHEEIAGQRIGPVSCLSFHPHKPLLAAGATDEIVSLY 949          
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: A0A1Z5JAI2_FISSO (Regulatory associated protein of mTOR n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAI2_FISSO)

HSP 1 Score: 167 bits (423), Expect = 7.940e-43
Identity = 106/303 (34.98%), Postives = 168/303 (55.45%), Query Frame = 1
Query:    1 GSRMTSVSWINETD-NSLLLTAAGDGVVRVWGDVMEAGADEGRPP---DLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSD---NSPGPLGGWMIAAGMTDGNVLLYDARERGVSA-VHK----------------MMRLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIFA 837
            G+R+TS  WINE    S++L  + DG VR+WG +++   + GRP     LVTAF ALP       G GL   WQ  +G L  AG+S+ L  WD+ SEQ+  + E     +++ L +  D   +S   LG  +I AG++DG + +YD R R  +  +H                     +++VV   F    +  +I++G   G I   D+R +S  +++    + Q++ MT +A+HP++P+LATGSH QFI ++TP GD +  ++ H    + R+G V+ +AFHP K LLAAGA+D ++ ++A
Sbjct: 1296 GTRITSCCWINEKSCKSMVLVGSDDGAVRLWGGMID---EIGRPTGTTSLVTAFSALPMSLPVNSGSGLVCEWQSEKGRLITAGSSQFLRSWDVESEQISVELETHTTSHITTLTSAYDPFMSSSSGLGPDIIVAGLSDGALRIYDIRSRRTAQELHSGHGSRGSKRTGARATLYSEHKSWVVRTAFTNYASKSEIVSGTLAGEIKFWDLRMSSSIRTI----EGQRSTMTTLAVHPQIPMLATGSHAQFIKMLTPDGDTLQVLRYHEKMANHRIGPVSFVAFHPFKPLLAAGATDSMIGLYA 1591          
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: A0A7S1Y1A0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1A0_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.940e-42
Identity = 102/292 (34.93%), Postives = 149/292 (51.03%), Query Frame = 1
Query:    1 GSRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRPPDLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALR--------APSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMRLR------------NYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASD 816
            G+R+TS  WINE+ NSLL T   DG VRVW D +     E R PDL  AF ALP+L +   G GL   WQQ  G L A G +     WD+ +E             ++ L         APS  S   +G   + AG ++G + ++D R +   A H++   R            +++V       GTG+++++G ++G+I   D+R  S   +     + Q + MT +A+HP VP++ATGS  QFI + T  G+ +  I+ H      R+G V  LAFHP+KL LAAG +D
Sbjct:  142 GTRITSSCWINESSNSLLATGCDDGTVRVW-DGLVVNPAEKREPDLCAAFCALPELRRGSSGSGLILEWQQNSGRLLAGGNTSCFRSWDLATESCISSHATDTDACITTLTTSWTEGMSAPSRGSA--IGPDTVVAGFSNGRLRMFDLRTK--IAAHEISEQRYRSKLMHYKEHNSWIVTTALTYYGTGNELISGCTSGNIKVWDLRAGSSLLTF----RVQSSPMTALAVHPTVPMVATGSKAQFIKLFTLDGETLQLIRYHEEMKGHRIGPVGCLAFHPHKLQLAAGGTD 424          
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: H3G5Z2_PHYRM (Raptor_N domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=H3G5Z2_PHYRM)

HSP 1 Score: 165 bits (417), Expect = 4.740e-42
Identity = 100/279 (35.84%), Postives = 157/279 (56.27%), Query Frame = 1
Query:    1 GSRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRPPDLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMRLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDD-KSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIF 834
            GSR+TS++WINET+ SLL   + DGV++++  +       G P  L++AF A+PDL     G GL  +WQQ  G++ A G S  L  W++  E+            ++++ A  D+SPG     M+ AG  DG + ++DAR R   AV  +M+     V       G  +++LTG   G +   D+R   +  KS+  H    ++ MT +A+H   P+ A+GSH QFI +    G+ ++ I+ H GF  +R+G V+ LAFHP++L LAAGA+D VV+++
Sbjct:  957 GSRLTSLNWINETEESLLTCGSDDGVIKIYHGLHNPHPSIGSP-KLLSAFVAVPDLVPGTRGSGLVMNWQQDAGMMYAGGNSSVLRGWNLRQEKCTVALPTQTDSCITSM-ASDDSSPG-----MVVAGFGDGTLRIFDARSRPDYAVKTIMKEHTSWVVQTHIYAGR-NELLTGSVTGELKFWDMRYPKNSVKSLEAH----RSPMTALAVHDYAPIFASGSHNQFIKVFRSDGEQLALIRYHEGFLGERIGPVSCLAFHPHRLFLAAGATDSVVAVY 1223          
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: A0A6A3UUR4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3UUR4_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.050e-41
Identity = 100/281 (35.59%), Postives = 155/281 (55.16%), Query Frame = 1
Query:    1 GSRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRPPDLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNS-PGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMRLR-NYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDD-KSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIF 834
            GSR+TS++WINE + SLL   + DGV++++  +         P  L++AF A+PDL     G GL  +WQQ+ G + A G S  L  WD+  E+      +P Q +       SD S PG     M+ AG  DG + ++D+R R   +V  +MR   ++VV          +++LTG   G +   D+R   +  KS+  H    ++ MT +A+H   P+ A+GSH QFI +    G+ ++ I+ H GF  +R+G V+ LAFHP +L LAAGA+D VV+++
Sbjct:  173 GSRLTSLNWINEAEESLLTCGSDDGVIKIYHGLHSPHPSIDSP-KLLSAFVAVPDLVPGTRGSGLVMNWQQQAGAMYAGGNSSMLRGWDLRQEKCTVA--LPTQTDSCITSMASDESIPG-----MVVAGFGDGTLRIFDSRSRPDYSVKTIMREHASWVVQTHI--YAGRNELLTGSVTGELKFWDLRYPKNSVKSLEAH----RSPMTALAVHDYAPIFASGSHNQFIKVFRSDGEQLALIRYHEGFLGERIGPVSCLAFHPRRLFLAAGATDSVVAVY 439          
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Match: K3WJU9_GLOUD (Raptor_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJU9_GLOUD)

HSP 1 Score: 162 bits (409), Expect = 5.730e-41
Identity = 99/280 (35.36%), Postives = 157/280 (56.07%), Query Frame = 1
Query:    1 GSRMTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRPPDLVTAFRALPDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMRLRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIR-KASDDKSMPYHCKAQQTAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGCVTALAFHPNKLLLAAGASDPVVSIFA 837
            GSR+TS++WINE++ SLL   + DGV++++  +      +   P L+++F A+PDL     G GL T+WQQ  G+  A G S +L  W++  E+    + +P Q +       SD + G      + AG  DG + L+DAR R   AV   M+     V       G  +++L+G  +G +   D+R   +  KS+  H    ++ MT +A+H   P+ A+GSH QFI +    G+ ++ I+ H GF  +R+G V+ LAFHP++L LAAGA+D VV+I+A
Sbjct: 1218 GSRLTSLNWINESEESLLTCGSDDGVIKIYHGLHSPQPHQ-TSPKLLSSFVAVPDLVPGTRGSGLITNWQQNAGMFFAGGNSSYLRGWNLRQERC--TFSLPTQTDSCITSMTSDETTGGT----LVAGFGDGTLRLFDARSRPEYAVKMTMKEHTSWVVQTHVYAGK-NEMLSGSVSGELKFWDLRYPRTSVKSLEAH----RSPMTALAVHDYAPIFASGSHNQFIKVFKSDGEQLALIRYHEGFLGERIGPVSCLAFHPHRLFLAAGATDSVVAIYA 1485          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7530.18716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIL7_ECTSI4.700e-20895.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBF0_9PHAE3.990e-19497.04Raptor_N domain-containing protein n=1 Tax=Ectocar... [more]
A0A836CAT4_9STRA7.840e-5941.87Raptor_N domain-containing protein n=1 Tax=Tribone... [more]
A0A7S4QVF6_9STRA5.100e-4535.62Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1YZH6_9STRA3.560e-4334.82Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1Z5JAI2_FISSO7.940e-4334.98Regulatory associated protein of mTOR n=2 Tax=Fist... [more]
A0A7S1Y1A0_9STRA1.940e-4234.93Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
H3G5Z2_PHYRM4.740e-4235.84Raptor_N domain-containing protein n=5 Tax=Phytoph... [more]
A0A6A3UUR4_9STRA1.050e-4135.59Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
K3WJU9_GLOUD5.730e-4135.36Raptor_N domain-containing protein n=1 Tax=Globisp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7530contigEcto-sp13_S_contig7530:3852..6978 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score585.1
Seed ortholog evalue1.9e-164
Seed eggNOG ortholog2880.D7FIL7
Model size915
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.TOR signaling
EggNOG OGsKOG1517@1,KOG1517@2759
Cds size906
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7530.18716.1prot_Ecto-sp13_S_contig7530.18716.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7530 3852..6969 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464021.507207-CDS-Ecto-sp13_S_contig7530:3851..40821681464021.507207-CDS-Ecto-sp13_S_contig7530:3851..4082Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7530 3852..4082 -
1681464021.518997-CDS-Ecto-sp13_S_contig7530:4517..47061681464021.518997-CDS-Ecto-sp13_S_contig7530:4517..4706Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7530 4518..4706 -
1681464021.5283241-CDS-Ecto-sp13_S_contig7530:5641..58361681464021.5283241-CDS-Ecto-sp13_S_contig7530:5641..5836Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7530 5642..5836 -
1681464021.5387487-CDS-Ecto-sp13_S_contig7530:6334..64721681464021.5387487-CDS-Ecto-sp13_S_contig7530:6334..6472Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7530 6335..6472 -
1681464021.5496485-CDS-Ecto-sp13_S_contig7530:6816..69691681464021.5496485-CDS-Ecto-sp13_S_contig7530:6816..6969Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7530 6817..6969 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464021.5606885-UTR-Ecto-sp13_S_contig7530:6969..69781681464021.5606885-UTR-Ecto-sp13_S_contig7530:6969..6978Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7530 6970..6978 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7530.18716.1

>prot_Ecto-sp13_S_contig7530.18716.1 ID=prot_Ecto-sp13_S_contig7530.18716.1|Name=mRNA_Ecto-sp13_S_contig7530.18716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MTSVSWINETDNSLLLTAAGDGVVRVWGDVMEAGADEGRPPDLVTAFRAL
PDLEQDPGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPE
QCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMR
LRNYVVDLFFPEEGTGHDILTGYSNGSIMTQDIRKASDDKSMPYHCKAQQ
TAMTCIAMHPRVPVLATGSHKQFINIITPRGDLMSRIKEHTGFFDQRLGC
VTALAFHPNKLLLAAGASDPVVSIFAHKEGTSSSTRSACSPASASSSYQR
R*
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mRNA from alignment at Ecto-sp13_S_contig7530:3852..6978-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7530.18716.1 ID=mRNA_Ecto-sp13_S_contig7530.18716.1|Name=mRNA_Ecto-sp13_S_contig7530.18716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3127bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7530:3852..6978- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCAGTCGGATGACCTCCGTATCCTGGATAAACGAGACCGACAACTCTCT CCTGCTGACGGCCGCGGGGGACGGAGTTGTCAGGGTGTGGGGGGACGTTA TGGAGGCCGGGGCCGACGAAGGGCGGCCGCCTGACCTGGTGACGGCCTTC CGCGCGCTACCGGTAAGCTTGTCGTCAGCATAATGATATCATATGCTGTT ATCTACGTACGTGTCGTATCTACGAGTGATCCCTCGGGAGTGGGCTAACG CAGCAGGGTCATCGAGGGTGATTGATTTGTTGTTGTTGTTGTTGTTGTTG TTGTCTTCACTTTCAAAATTGTTCCGATCTCTCTATCCAGTACTTTGTCT CATCCAAGGATGCAAGATGAAAATTAAAGCAGGAAGCAGGACCAACTTAC AGCCAGCTTGTGACCTTTCCCAAGCTCACACAGCAGAAGTTTCTCTTCGC TTTTTCCATGTCGATCGTTTGTGTGTTCCCTCCCACTACCTCTGGTGTCT AAGCAGGACTTGGAGCAGGATCCAGGAGGCCCGGGTTTGGCGACCCACTG GCAACAACGGAGGGGCTTGCTGTCTGCCGCCGGCGCCAGCCGACACCTGA ACGTCTGGGACATGGGAAGCGAGCAGATGTGGAAGCAGTGGGAGGTGATG ATGAGGGTGTTGGTCTTGTGTCTACGAGGATGTTTTATTTTGTTAAGACG ATGGTGTTGGCTGTGTAACAGTTTGCGGCGGCGGCGGCAGCGTTGCTTAG GTTCCGCTCAAAGAGGGGATGTGATACCAAAACCTGCAAGGCCTGCTGGT CAAGACGGGGGTCGATCTGGTCAAGAGGGAGGTCAATTTAGCTATTCGTG GAGAGGTAGGGTCTAAACTGCGGACGCCCCTGATCAACCACAGTGCCGAA CGACGGGTGCACGCTATTCTGGGTTCAGTGGGAAGGAGGAGAGGGCTTGG AGCGTGATCTTTCGCGTGTTGGTTTCGCCGGATGACAGAGATGACAGGCT GCTGCTGCAGCCCAGGCGCCCGTCGCCCTCTTTTCTTCGACTATTGAGTA CGTCCCGTAGACTTTCCTCGTGTTCTCTTTTCTCACGTCATCCTCCCCCC CCCCCCCCCCCCCCTCGTGTCTCCTTACTCTCGTCCATCCAGGTGCCAGA GCAGTGCAACGTGAGTGCGCTCCGCGCTCCCTCCGACAACAGCCCGGGTC CGCTAGGCGGGTGGATGATCGCCGCAGGCATGACGGACGGAAACGTGCTG CTGTACGATGCGAGGGAGCGCGGCGTGTCGGCCGTGCACAAGATGATGAG ACTGCGGAACTACGTCGTGGACCTCTTTTTCCCGGAGGTGTGTGCAGCGG GATAAATCTCTGTATCTGCCTCTCAGGACCAGAAATCCGAGCGCTATGTT TTTGTTTTGTTTCTATATAGAGATGATGCGTGAAATGAAAACACAGAAAT TATGCACACGTCGAGCTACCCAACTCCATCATCATGTGCATTGTATCGCA GTCGTCTTTTTTTTCTCTTGTCTTCACTTCAAATCAACGACCACAGCGAT TGTGCCGCTTTTCTCCAACCTGGAGTCTGGGCAGGTTTTTCCAAGTACGC AAACATACTGGATAAAGTATAGAGTAGGCTAAGTTCGGGTTGGGGTTAGG GTCTGCGTGCCCCCATCCCTGGGCTTTTTTCGTAATAACCCTTACTTTCT TTGCGTACCCAGTCCGTGTATCGTAGCATACCCCGACACAAGCAAGAGCC AAACACGCTGGGTTGTGTGTAGGCTTGTCGTCAAACTCCCAATGACCCGT GCGTGTTCAGTGAGAGGATGATACAGCAATACGACGATGGTGGTGATGTA TTTTTTGTCCGTAGTACCTCGGGGGTGCAGCAGCTCTCGCCGACCCATCC CCTTTTGCGAAATCGCGAAGCCCCCTTTTAGAGGCGTTTGGTGTGAGCGC GCTGTGGGGTTGAAATTTGGCCACCTGGTGGGGGAGACTCCAATTGTGGG ACTCACGTTTGTATAGTGTGGTACACAGTAGTTACCGTGGGCTGTTGTGA GAGGCTGGTTCTATGCGCCCGACAACGAATCGCACCCCCCCCAAGATATT TTAATCCTTTGTTTTTAGCCACCTTTGGCAAAGTTGGAAGGAACGATTGA CCATCGGTGATCGGTCCTGTGGGAACAACGCGCCGTCGTGTCGAGAGGAC TCATAATCAACGGTCCAACAGCTAAGCCCCCCCCCCCCCCCTTTTGCCCC CCCACTCGTGACGGACCAACAGGAGGGCACCGGCCACGACATCCTGACGG GTTACTCGAACGGCTCGATCATGACGCAGGACATCCGCAAGGCTTCCGAT GACAAGTCCATGCCCTACCACTGCAAGGCGCAGCAGACGGCGATGACCTG CATCGCCATGCACCCGAGGGTGCCCGTTCTGGCGACCGGGAGCCACAAGC AGTTCATCAACGTGAGTTCCTAAAAATTGTGCTCGCGTTCACAGACATGC GTCGGAGATATAGCCACAACAGTTGAAGGGGATTGGTTCACGCCTTTTCG GTGAGTGGGAGAGAAACCGGAGCCGGACCCATGCGTGGGGTAATTGTTTG TTGAACCGGGTAGATACCCATCCTCCCATCAGTCACATGTCGATTTTGTA GGACATTTCGTAGGGACAGAGACATTTCATGACTGGGTGATCATTTCTTC GTTTCGGGGCGTTTCCCCTGGCGGTGCATGCCATTTGGCTTCGTCCGACC TCAATTTTTCCACAGCAGCGTTGCTCAACCTTGTGGTCCTTCTACATGGT GCCACTCGCCGTCGATGTATCAAGCACCGCGAGGCACACCCAATCCTGTC CTGACGAGGAACACGGTGTCCCCTCCCCCAACTCCGGCCTCCGCAGATCA TCACTCCGCGTGGCGACCTCATGTCCCGAATCAAGGAGCACACCGGGTTC TTCGACCAGCGATTGGGATGCGTGACCGCGTTGGCGTTCCACCCGAATAA GCTCTTGCTGGCGGCCGGCGCCTCTGACCCTGTAGTGTCGATCTTCGCCC ACAAGGAAGGGACGAGCTCGTCGACAAGATCAGCCTGTTCACCGGCGTCC GCGTCGTCGTCCTACCAGCGACGATGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7530:3852..6978-

>mRNA_Ecto-sp13_S_contig7530.18716.1 ID=mRNA_Ecto-sp13_S_contig7530.18716.1|Name=mRNA_Ecto-sp13_S_contig7530.18716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=906bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7530:3852..6978- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACCTCCGTATCCTGGATAAACGAGACCGACAACTCTCTCCTGCTGAC
GGCCGCGGGGGACGGAGTTGTCAGGGTGTGGGGGGACGTTATGGAGGCCG
GGGCCGACGAAGGGCGGCCGCCTGACCTGGTGACGGCCTTCCGCGCGCTA
CCGGACTTGGAGCAGGATCCAGGAGGCCCGGGTTTGGCGACCCACTGGCA
ACAACGGAGGGGCTTGCTGTCTGCCGCCGGCGCCAGCCGACACCTGAACG
TCTGGGACATGGGAAGCGAGCAGATGTGGAAGCAGTGGGAGGTGCCAGAG
CAGTGCAACGTGAGTGCGCTCCGCGCTCCCTCCGACAACAGCCCGGGTCC
GCTAGGCGGGTGGATGATCGCCGCAGGCATGACGGACGGAAACGTGCTGC
TGTACGATGCGAGGGAGCGCGGCGTGTCGGCCGTGCACAAGATGATGAGA
CTGCGGAACTACGTCGTGGACCTCTTTTTCCCGGAGGAGGGCACCGGCCA
CGACATCCTGACGGGTTACTCGAACGGCTCGATCATGACGCAGGACATCC
GCAAGGCTTCCGATGACAAGTCCATGCCCTACCACTGCAAGGCGCAGCAG
ACGGCGATGACCTGCATCGCCATGCACCCGAGGGTGCCCGTTCTGGCGAC
CGGGAGCCACAAGCAGTTCATCAACATCATCACTCCGCGTGGCGACCTCA
TGTCCCGAATCAAGGAGCACACCGGGTTCTTCGACCAGCGATTGGGATGC
GTGACCGCGTTGGCGTTCCACCCGAATAAGCTCTTGCTGGCGGCCGGCGC
CTCTGACCCTGTAGTGTCGATCTTCGCCCACAAGGAAGGGACGAGCTCGT
CGACAAGATCAGCCTGTTCACCGGCGTCCGCGTCGTCGTCCTACCAGCGA
CGATGA
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