prot_Ecto-sp13_S_contig7527.18712.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7527.18712.1
Unique Nameprot_Ecto-sp13_S_contig7527.18712.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length491
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7527.18712.1 vs. uniprot
Match: A0A6H5K0I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I9_9PHAE)

HSP 1 Score: 504 bits (1299), Expect = 1.800e-173
Identity = 365/458 (79.69%), Postives = 371/458 (81.00%), Query Frame = 0 
Query:   61 MASNKIDIHEAAGDGNLAEVRAFLKAGGIIDKRDSDRWTPLMLSVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------AEGKTPGDVVGSDLSEDSREIVLALLKEHAARVKNTKQRRGSCPAIPRTMMATAVHAAGTGTINGASVPAAAPLLLSSPTAPSHKPGTLLPLPSVVVTNKNAGEIDAETAVGGANSNQAGGQATRHVSFSVADRIRDHSPMGKNQGRCAEISSAAALAIATAEETSVSPEMPLXXXXXXXXXXAMSAPGQTPGRSSEPSKRVPTTDGATTMADTAGGIGSTAVGQYKGCRDNKNDSEVFALRQALKAAEERARASENSLSQIEERRLSEEARAQRLEERVAELEKVLSEQSRERQDA 490
            MASNKIDIHEAAGDGNLAEVRAFLKAGGI+DKRDSDRWTPLMLSVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                     AEGKTPGDVVGSDLSEDSREI L LLKEHAARVKNTKQRRGSCPAIPRTMMAT VHAAGTGTINGASVPAAAPLLLSSPTAPSHKPGTLLPLPSVVVTNKNAGEIDAETAV GANSNQAGGQATRH+SFS ADRIRDHS  GKN+GR AEISSAAAL  A AEET VSPE PL          A SAPGQTPGR+S+P KRVP T GATT ADTAGGIGSTA GQ  GCRDNKNDSEVFALRQALKAAEERARASENSLSQIEERRL EEARAQRL ERVAELEKVLSE+S ERQDA
Sbjct:    1 MASNKIDIHEAAGDGNLAEVRAFLKAGGIVDKRDSDRWTPLMLSVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWATSFNANSADIMAFEILMGLWRGEKQVRSFRYGYTAVVELLLKRGADANFKDAEGKTPGDVVGSDLSEDSREIALTLLKEHAARVKNTKQRRGSCPAIPRTMMATVVHAAGTGTINGASVPAAAPLLLSSPTAPSHKPGTLLPLPSVVVTNKNAGEIDAETAVDGANSNQAGGQATRHISFSAADRIRDHSSTGKNEGRYAEISSAAALVTAAAEETGVSPETPLTTSEVGSPSRATSAPGQTPGRASDPKKRVPITGGATTTADTAGGIGSTAEGQDNGCRDNKNDSEVFALRQALKAAEERARASENSLSQIEERRLREEARAQRLXERVAELEKVLSERSTERQDA 458
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BLAST of mRNA_Ecto-sp13_S_contig7527.18712.1 vs. uniprot
Match: D7FNY5_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY5_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 1.000e-167
Identity = 375/427 (87.82%), Postives = 383/427 (89.70%), Query Frame = 0 
Query:   61 MASNKIDIHEAAGDGNLAEVRAFLKAGGIIDKRDSDRWTPLMLSVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGKTPGDVVGSDLSEDSREIVLALLKEHAARVKNTKQRRGSCPAIPRTMMATAVHAAGTGTINGASVPAAAPLLLSSPTAPSHKPGTLLPLPSVVVTNKNAGEIDAETAVGGANSNQAGGQATRHVSFSVADRIRDHSPMGKNQGRCAEISSAAALAIATAEETSVSPEMPLXXXXXXXXXXAMSAPGQTPGRSSEPSKRVPTTDGATTMADTAGGIGSTAVGQYKGCRDNKNDSEVFALRQALKAAEERARASENSLSQIEERRLSEEARAQRLEERVAELEKVLSEQSRER 487
            MASNKIDIHEAA DGNLAEVRAFLKAGGIIDKRD DRWTPLMLSV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGKTPGDVVGSDLSEDSREIV  LLKEHAARVKNTKQRRGSCPAIPRT+MATAVHA GTGT+NGASV AAAPLLLSSPTAPSHKPG LLPLPSVVVTNKNAGEIDAETAV GANSNQAGGQATR +SFS ADRIRDHSPMGKNQGRCAEISSAAA A ATAEETSVSP  PL          A S PGQTPGR+S+P   VPTT GATTM DTAGG+GSTA  Q KGCRDNKNDSEVFALRQALKAAEER RASENSLSQ+EERRL EEARAQ     VAELEK+LSEQ RER
Sbjct:    1 MASNKIDIHEAARDGNLAEVRAFLKAGGIIDKRDPDRWTPLMLSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGKTPGDVVGSDLSEDSREIVRTLLKEHAARVKNTKQRRGSCPAIPRTLMATAVHATGTGTMNGASVAAAAPLLLSSPTAPSHKPGALLPLPSVVVTNKNAGEIDAETAVHGANSNQAGGQATRRISFSAADRIRDHSPMGKNQGRCAEISSAAAPATATAEETSVSPVTPLTTSVVGSPSRATSTPGQTPGRASDPKNCVPTTGGATTMTDTAGGVGSTAEDQDKGCRDNKNDSEVFALRQALKAAEERGRASENSLSQLEERRLREEARAQXXXXXVAELEKMLSEQPRER 427
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7527.18712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0I9_9PHAE1.800e-17379.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNY5_ECTSI1.000e-16787.82Chain A, Crystal Structure Of A Designed Full Cons... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..490
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 62..199
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 62..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..490
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 162..191
e-value: 1.4E-5
score: 34.5
coord: 63..92
e-value: 1000.0
score: 5.0
coord: 96..125
e-value: 9.5E-4
score: 28.4
coord: 129..158
e-value: 4.2E-5
score: 33.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 96..128
score: 11.407
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 162..194
score: 13.811
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 129..161
score: 10.713
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 68..127
e-value: 2.0E-6
score: 28.3
coord: 129..193
e-value: 3.3E-14
score: 53.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 63..231
score: 40.558
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 40..274
e-value: 4.4E-46
score: 159.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 66..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7527contigEcto-sp13_S_contig7527:2369..5797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7527.18712.1mRNA_Ecto-sp13_S_contig7527.18712.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7527 2369..5797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7527.18712.1 ID=prot_Ecto-sp13_S_contig7527.18712.1|Name=mRNA_Ecto-sp13_S_contig7527.18712.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=491bp
TRHLLAICSAASNTYSSSRCGDQDKREKLTSRVFCVATPNQHFVARSTRN
NRTHDAVPPSMASNKIDIHEAAGDGNLAEVRAFLKAGGIIDKRDSDRWTP
LMLSVREGHLEVARQLLRSGAALEAKDGDKWTAMHVAAANGHPQCCQLLL
DRGGNPRAVDENRRTPLHWAARYGYAAVVELLLKRGEDANFKDAEGKTPG
DVVGSDLSEDSREIVLALLKEHAARVKNTKQRRGSCPAIPRTMMATAVHA
AGTGTINGASVPAAAPLLLSSPTAPSHKPGTLLPLPSVVVTNKNAGEIDA
ETAVGGANSNQAGGQATRHVSFSVADRIRDHSPMGKNQGRCAEISSAAAL
AIATAEETSVSPEMPLATSEVGSPSPAMSAPGQTPGRSSEPSKRVPTTDG
ATTMADTAGGIGSTAVGQYKGCRDNKNDSEVFALRQALKAAEERARASEN
SLSQIEERRLSEEARAQRLEERVAELEKVLSEQSRERQDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf