prot_Ecto-sp13_S_contig7521.18708.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7521.18708.1
Unique Nameprot_Ecto-sp13_S_contig7521.18708.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length200
Homology
BLAST of mRNA_Ecto-sp13_S_contig7521.18708.1 vs. uniprot
Match: D7G462_ECTSI (Nicolin 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G462_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 8.990e-138
Identity = 188/199 (94.47%), Postives = 194/199 (97.49%), Query Frame = 0
Query:    1 MESSATTALRGASPYPIPAFIGPLVRSRQTTPCPTYFEVSFLESKLPRKPARRLDAIVFRNFYCSHITIKQRRQRFDTARAADCGKDGDPWLTILQDRPLMEDPHHEDDAQYWHVVRSEEFDPEEFDAESTAPISRIYLYQSSPMWKTFGLHHVKAVSWSRAGSSKGGRDDEREADGNLGDLCRGISEQVEIFGDKHRG 199
            MESSAT A+RGA+PYPIPAFIGPLVRSRQTTPCPTYFEVSFLESKLPRKPARRLDAIVF+NFYCSHITIKQRRQRFDTA AADCGKDGDPWLTIL+DRPLMEDPHHEDDAQYWHVVRSEEFDPEE+DAESTAPI RIYLYQSSPMWKTFGLHHVKAV WSRAGSS GGRDDEREADGNLGDLCRGISEQV+IFGDKHRG
Sbjct:    1 MESSATAAVRGANPYPIPAFIGPLVRSRQTTPCPTYFEVSFLESKLPRKPARRLDAIVFKNFYCSHITIKQRRQRFDTATAADCGKDGDPWLTILRDRPLMEDPHHEDDAQYWHVVRSEEFDPEEYDAESTAPI-RIYLYQSSPMWKTFGLHHVKAVGWSRAGSSNGGRDDEREADGNLGDLCRGISEQVKIFGDKHRG 198          
BLAST of mRNA_Ecto-sp13_S_contig7521.18708.1 vs. uniprot
Match: A0A6G0XAT5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAT5_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.900e-9
Identity = 41/116 (35.34%), Postives = 56/116 (48.28%), Query Frame = 0
Query:   48 RKPARRLDAIVFRNFYCSHITIKQR-RQRFDTARAADCGKDGDPWLTILQDRPLMEDPHHEDDAQYWHVVRSEEFDPEEFDAESTAPISRIYLYQSSPMWKTFGLHHVKAVSWSRA 162
            R P   L  I F+N+Y + + I Q    R D                IL+ R LM+D HHEDDAQ WH+++ EE     FD+ S   +   YL Q SP+W+ + L  +K    S A
Sbjct:   41 RSPPSNLSHITFQNYYVASLRIDQVINGRSDV---------------ILEKRSLMDDAHHEDDAQNWHIIKREELGSH-FDSTSVEKLI-FYLTQPSPLWEKWELRTLKVFETSEA 139          
BLAST of mRNA_Ecto-sp13_S_contig7521.18708.1 vs. uniprot
Match: A0A6A5BXG1_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BXG1_NAEFO)

HSP 1 Score: 60.5 bits (145), Expect = 4.540e-8
Identity = 40/129 (31.01%), Postives = 66/129 (51.16%), Query Frame = 0
Query:   24 LVRSRQTTPCPTYFEVSFLESKLPRKPARRLDAIVFRNFYCSHITIKQRRQRFDTARAADCGKDGDPWLTILQDRPLMEDPHHEDDAQ-YWHVVRSEEFDPEEFDAESTAPISRIYLYQSSPMWKTFGL 151
            +V+ +   PC  Y ++ F       KP + +  I+FRN+YCSHITIK + Q                ++T+L    LME+ ++E+D+Q Y  +   ++F+   +  +      R Y YQ+SP WK+F L
Sbjct:   14 IVKEQSKRPCLIYQDIKF------EKPTQ-IAFIIFRNYYCSHITIKYKAQN-------------GTFITLLSKYQLMENANYENDSQNYVRINCGKDFNSN-YKKDMQFNNLRFYYYQTSPNWKSFCL 121          
BLAST of mRNA_Ecto-sp13_S_contig7521.18708.1 vs. uniprot
Match: A0A2P1N6T8_NAEFO (GS28 n=2 Tax=Naegleria fowleri TaxID=5763 RepID=A0A2P1N6T8_NAEFO)

HSP 1 Score: 60.5 bits (145), Expect = 2.490e-7
Identity = 40/129 (31.01%), Postives = 66/129 (51.16%), Query Frame = 0
Query:   24 LVRSRQTTPCPTYFEVSFLESKLPRKPARRLDAIVFRNFYCSHITIKQRRQRFDTARAADCGKDGDPWLTILQDRPLMEDPHHEDDAQ-YWHVVRSEEFDPEEFDAESTAPISRIYLYQSSPMWKTFGL 151
            +V+ +   PC  Y ++ F       KP + +  I+FRN+YCSHITIK + Q                ++T+L    LME+ ++E+D+Q Y  +   ++F+   +  +      R Y YQ+SP WK+F L
Sbjct:   14 IVKEQSKRPCLIYQDIKF------EKPTQ-IAFIIFRNYYCSHITIKYKAQN-------------GTFITLLSKYQLMENANYENDSQNYVRINCGKDFNSN-YKKDMQFNNLRFYYYQTSPNWKSFCL 121          
BLAST of mRNA_Ecto-sp13_S_contig7521.18708.1 vs. uniprot
Match: W4GYG4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYG4_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.900e-7
Identity = 41/123 (33.33%), Postives = 57/123 (46.34%), Query Frame = 0
Query:   33 CPTYFEVSFLESKLPRKPARRLDAIVFRNFYCSHITIKQRRQRFDTARAADCGKDGDPWLTILQDRPLMEDPHHEDDAQYWHVVRSEEFDPEEFDAESTAPISRIYLYQSSPMWKTFGLHHVK 155
            CP    V  +E      PA     + F+N+Y + + I Q  Q          GK     +TIL   PLM+D HHE DAQ WH+++ +EF      A +   I   YL Q SP+W  + L  +K
Sbjct:   32 CPPGDHVRCIEVTFKAPPAN-FSHVTFQNYYAATLRIDQVVQ----------GK----CVTILNRFPLMQDAHHEGDAQNWHIIKRDEFGAMLDVARAERFI--FYLLQPSPLWDKWELRSIK 137          
BLAST of mRNA_Ecto-sp13_S_contig7521.18708.1 vs. uniprot
Match: A0A6A5AC89_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AC89_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.100e-5
Identity = 27/66 (40.91%), Postives = 36/66 (54.55%), Query Frame = 0
Query:   92 LTILQDRPLMEDPHHEDDAQYWHVVRSEEFDPEEFDAESTAPISRI--YLYQSSPMWKTFGLHHVK 155
            +TIL   PLM+D HHE DAQ WH+++ +EF          A   R   YL Q SP+W  + L  +K
Sbjct:    1 MTILNRFPLMQDAHHEGDAQNWHIIKRDEFGA----MLDVAGAERFIFYLLQPSPLWDKWELRSIK 62          
BLAST of mRNA_Ecto-sp13_S_contig7521.18708.1 vs. uniprot
Match: A0A024UMP9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMP9_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.560e-5
Identity = 39/123 (31.71%), Postives = 58/123 (47.15%), Query Frame = 0
Query:   33 CPTYFEVSFLESKLPRKPARRLDAIVFRNFYCSHITIKQRRQRFDTARAADCGKDGDPWLTILQDRPLMEDPHHEDDAQYWHVVRSEEFDPEEFDAESTAPISRIYLYQSSPMWKTFGLHHVK 155
            CP    V  +E    + P      + F+N+Y + + I Q  Q         C       +TIL    LM++ HHEDDAQ WH+++ EEF      A++   I   YL Q SP+W+ + L  +K
Sbjct:   32 CPPGDHVRCIEVTF-KAPPIYFSHLSFQNYYAAMLRIDQVVQ-------GRC-------VTILDRFRLMQNAHHEDDAQNWHIIKREEFGAPLDVAKAEHFI--FYLLQPSPLWEKWELRSIK 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7521.18708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G462_ECTSI8.990e-13894.47Nicolin 1 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6G0XAT5_9STRA2.900e-935.34Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A5BXG1_NAEFO4.540e-831.01Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]
A0A2P1N6T8_NAEFO2.490e-731.01GS28 n=2 Tax=Naegleria fowleri TaxID=5763 RepID=A0... [more]
W4GYG4_9STRA3.900e-733.33Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A5AC89_9STRA2.100e-540.91Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024UMP9_9STRA2.560e-531.71Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040235Nicolin-1PANTHERPTHR31239FAMILY NOT NAMEDcoord: 42..158
NoneNo IPR availablePANTHERPTHR31239:SF2NICOLIN-1coord: 42..158
NoneNo IPR availablePRODOMPD868899coord: 25..155
e-value: 2.0E-5
score: 113.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7521contigEcto-sp13_S_contig7521:4452..5552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7521.18708.1mRNA_Ecto-sp13_S_contig7521.18708.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7521 4452..5693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7521.18708.1 ID=prot_Ecto-sp13_S_contig7521.18708.1|Name=mRNA_Ecto-sp13_S_contig7521.18708.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
MESSATTALRGASPYPIPAFIGPLVRSRQTTPCPTYFEVSFLESKLPRKP
ARRLDAIVFRNFYCSHITIKQRRQRFDTARAADCGKDGDPWLTILQDRPL
MEDPHHEDDAQYWHVVRSEEFDPEEFDAESTAPISRIYLYQSSPMWKTFG
LHHVKAVSWSRAGSSKGGRDDEREADGNLGDLCRGISEQVEIFGDKHRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040235Nicolin-1