mRNA_Ecto-sp13_S_contig7521.18707.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7521.18707.1
Unique NamemRNA_Ecto-sp13_S_contig7521.18707.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: D7G461_ECTSI (JMJD6 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G461_ECTSI)

HSP 1 Score: 532 bits (1371), Expect = 5.340e-188
Identity = 252/258 (97.67%), Postives = 255/258 (98.84%), Query Frame = 1
Query:    1 RYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKEASSRRRSGH 774
            RYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVP YFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTV+SGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELD+EHPSLA+TARRLNSEDGFVMV K ASSRRRSGH
Sbjct:  122 RYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPHYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDKEHPSLADTARRLNSEDGFVMVDKGASSRRRSGH 379          
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: A0A8K1CVA6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVA6_PYTOL)

HSP 1 Score: 375 bits (962), Expect = 3.920e-126
Identity = 170/253 (67.19%), Postives = 206/253 (81.42%), Query Frame = 1
Query:   10 DCK---LKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHG-NSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKEASS 756
            +CK   LKCGEDDDG S+++K KYF +Y+  QTDDSPLYIFDS FDD E  K LL D+ VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT VH+DPLGTSAWNT++ GRK WVLFPPHV K + KGK  I++GEDDE +NYF+D+LPRI++ H    ++  E +QYPGDT+FVPGGWWHAV N+ED+VA+TQN+CS  NFE+VWRKTRTGRK+M+VKW ++L + HP LA  A +LN EDGFVM HK+ S+
Sbjct:  129 NCKRAMLKCGEDDDGKSIRMKFKYFYKYLKLQTDDSPLYIFDSSFDDREDTKPLLADYAVPRYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTCVHLDPLGTSAWNTLLVGRKRWVLFPPHVSKEIVKGKSHIKKGEDDEAVNYFMDILPRIKKAHSPEELQCIELMQYPGDTIFVPGGWWHAVFNVEDTVAVTQNYCSSQNFERVWRKTRTGRKRMAVKWFQKLQKHHPQLATLAVKLNREDGFVMRHKDGSA 381          
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: A0A7S3GT28_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT28_9STRA)

HSP 1 Score: 373 bits (957), Expect = 6.600e-123
Identity = 166/255 (65.10%), Postives = 206/255 (80.78%), Query Frame = 1
Query:    1 RYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKEASSRRR 765
            R+ D   KCGEDDDGY VK +LKYFL+YM +  DDSPLY+FD +FD  ++++ LL D+ VP YF DDLFSLVGE+RRPPYRW L+GP+RSG+SVHIDPL TSAWNT++ GRK WVLFPP   K++AKG DVI++GEDDE INYFVD+LPRIR KHG+++KIYE +Q PG+T+FVPGGWWH VLNLED++A+TQNFCS  NF  VWR TR GR KMSV+WLKEL +++P LA  A  LN +D F M +KEA  +++
Sbjct:  111 RFKDRYFKCGEDDDGYKVKTRLKYFLKYMKNNKDDSPLYVFDGNFDGDDISRSLLADYKVPSYFTDDLFSLVGEKRRPPYRWILLGPERSGSSVHIDPLATSAWNTILVGRKRWVLFPPETPKSIAKGLDVIQKGEDDEAINYFVDMLPRIREKHGHNLKIYELIQEPGETIFVPGGWWHGVLNLEDTIAVTQNFCSCTNFPSVWRSTRKGRPKMSVRWLKELAKQYPDLAAQALLLNDQDQFAMYNKEADRKKK 365          
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: K3X3W1_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3W1_GLOUD)

HSP 1 Score: 364 bits (934), Expect = 9.260e-123
Identity = 162/248 (65.32%), Postives = 204/248 (82.26%), Query Frame = 1
Query:    4 YGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHG-NSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHK 744
            Y   +LKCGEDDDG S+++K KYF++Y++HQTDDSPLYIFDS FD+    K LL+D+ VP YF +DLFSLVGE RRPPYRWFLVGPKRSGT +H+DPLGTSAWNT++ GRK WVLFPP V K+V KGK  +R  EDDE +NYF+D+LPRI+R H    ++  E +QYPGDT+FVPGGWWHAV N+ED+VA+TQNFCS  NFE+VWRKTR+GRK+M+VKWL +L+++HP LA  A+ LN++D +VM +K
Sbjct:   87 YKRVQLKCGEDDDGKSIRMKFKYFMKYLEHQTDDSPLYIFDSTFDEKADTKPLLDDYKVPRYFNEDLFSLVGEDRRPPYRWFLVGPKRSGTCIHLDPLGTSAWNTLLVGRKRWVLFPPDVPKHVVKGKHHVRPSEDDEAVNYFMDILPRIKRAHPPEMLRCIELMQYPGDTIFVPGGWWHAVFNVEDTVAVTQNFCSSQNFERVWRKTRSGRKRMAVKWLTKLEKKHPHLAALAKELNAQDNYVMYNK 334          
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: V9EZE5_PHYPR (JmjC domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9EZE5_PHYPR)

HSP 1 Score: 362 bits (929), Expect = 4.450e-121
Identity = 165/251 (65.74%), Postives = 205/251 (81.67%), Query Frame = 1
Query:    4 YGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHG-NSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKEAS 753
            Y   +LKCGEDD G S+++K KYF+ YM++QTDDSPLYIFDS FDDH+  K LL+D+ VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT++H+DPLGTSAWNT++ GRK WVLFPPH+ KN+  GK  IR  EDDE +NYF+DLLPRI+R +   +++  EF+QYPG+TVF+PGGWWHAV N++D+VA+TQNFCS  NF  VWRKTR+GRK+M+VKWLK+L+  +P LA  A  LN +D FVM  KE+S
Sbjct:  152 YKRVQLKCGEDDYGKSIRMKFKYFVTYMNNQTDDSPLYIFDSTFDDHKDTKPLLDDYKVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLIVGRKRWVLFPPHLPKNLVNGKKHIRGDEDDEAVNYFMDLLPRIKRANAPETLQCIEFMQYPGETVFIPGGWWHAVFNVDDTVAVTQNFCSSQNFPAVWRKTRSGRKRMAVKWLKKLETHNPELAALATELNQKDKFVMYSKESS 402          
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: A0A3M6VB54_9STRA (JmjC domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB54_9STRA)

HSP 1 Score: 362 bits (929), Expect = 1.740e-120
Identity = 164/253 (64.82%), Postives = 203/253 (80.24%), Query Frame = 1
Query:    4 YGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRK-HGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKEASSR 759
            Y + +LKCGEDD G S+++K KYF+ Y++HQTDDSPLYIFDS FDDHE  K LL+D+ VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT++H+DPLGTSAWNT++ GRK WVLFPPHV K++  GK  +R  EDDE +NYF+DLLPR++R     +++  E +QYPG+TVF+PGGWWHAV N++D+VAITQNFCS  NF  VWRKTR+GRK+M+ KWLK L+  HP L   A  LN +D +VM +KE SSR
Sbjct:  189 YKNVELKCGEDDHGKSIRMKFKYFMTYLNHQTDDSPLYIFDSTFDDHEDTKPLLDDYKVPKYFPEDLFSLVGESRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLIVGRKRWVLFPPHVPKHLVNGKRYVRDDEDDEAVNYFMDLLPRLKRACPRETLQCVECMQYPGETVFIPGGWWHAVFNVDDTVAITQNFCSSQNFPAVWRKTRSGRKRMAAKWLKRLETCHPELVTMAMELNQKDKYVMYNKERSSR 441          
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: A0A484E8M1_BRELC (JmjC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8M1_BRELC)

HSP 1 Score: 359 bits (921), Expect = 5.980e-120
Identity = 161/250 (64.40%), Postives = 204/250 (81.60%), Query Frame = 1
Query:    1 RYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHGN-SIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKE 747
            +Y   + KCGEDD G S+++KLKYFL Y+ +Q DDSPLYIFDS FDDH   K LLED+ VP YFP+DLFSLVGE RRPPYRWFL+GPKRSGT++HIDPLGTSAWNT++ GRK W+LFPPH+ K++  GK  +R  EDDE +NYF+DLLPRI++ + + S++  EF+QYPG+TVF+PGGWWHAVLN+ED+VA+TQNFCS  NF  VWRKTR GRK+M+VKWL++L+ ++P LA  A +LN +D +VM  KE
Sbjct:  142 KYKRVEFKCGEDDYGKSIRMKLKYFLIYLTYQIDDSPLYIFDSSFDDHVDTKSLLEDYQVPKYFPEDLFSLVGEDRRPPYRWFLIGPKRSGTTLHIDPLGTSAWNTLIVGRKRWILFPPHLPKHIVNGKKHVRGNEDDEAVNYFMDLLPRIKQANSSKSLQCIEFMQYPGETVFIPGGWWHAVLNVEDTVAVTQNFCSSQNFPAVWRKTRKGRKRMAVKWLRKLELQYPELAVVATKLNQKDKYVMYSKE 391          
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: G4ZR36_PHYSP (JmjC domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=G4ZR36_PHYSP)

HSP 1 Score: 359 bits (921), Expect = 9.650e-120
Identity = 160/252 (63.49%), Postives = 204/252 (80.95%), Query Frame = 1
Query:    4 YGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHG-NSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKEASS 756
            Y    LKCGEDD+G ++++K KYF+ Y++HQTDDSPLYIFDS FDDH+  K LL+D+ VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT++H+DPLGTSAWNT++ GRK WVLFPPH+ KN+  GK  +R  EDDE +NYF+DLLPR++R     +++  EF+QYPG+TV++PGGWWHAV N++D+VA+TQN+CS  NF  VWRKTR+GRK+M+VKWLK+L+  +P LA  A  LN +D +VM  KE SS
Sbjct:  156 YKRVMLKCGEDDNGKTIRMKFKYFMTYLNHQTDDSPLYIFDSTFDDHKDTKPLLDDYKVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHLDPLGTSAWNTLLVGRKRWVLFPPHLPKNLVNGKKHVRGNEDDEAVNYFMDLLPRLKRASPPETLQCIEFMQYPGETVYIPGGWWHAVFNVDDTVAVTQNYCSSQNFPAVWRKTRSGRKRMTVKWLKKLETHNPELAALATELNQKDKYVMYSKEPSS 407          
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: A0A0P1AHP6_PLAHL (Histone arginine n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHP6_PLAHL)

HSP 1 Score: 357 bits (917), Expect = 2.740e-119
Identity = 160/250 (64.00%), Postives = 204/250 (81.60%), Query Frame = 1
Query:    1 RYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHG-NSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKE 747
            +Y   +LKCGEDD G SV++K KYF  Y+  QTDDSPLYIFDS FDDH   K LL+D+ VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT++H+DPLGTSAWNT++ GRK WVLFPPH+ K++  GK  +R  EDDE +NYF+DLLPR++R +  ++++  EF+QYPG+TVF+PGGWWHAVLN++D+VA+TQNFCS  NF  VWRKTR+GRK+M+VKWLK+L+  +P LA  A++LN +D ++M  KE
Sbjct:  147 KYKRVELKCGEDDYGKSVRIKFKYFFSYLTSQTDDSPLYIFDSSFDDHVDTKPLLDDYQVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHVDPLGTSAWNTLIIGRKRWVLFPPHLPKHLVNGKVHLRGNEDDEAVNYFMDLLPRLKRANSLDALQCIEFMQYPGETVFIPGGWWHAVLNVDDTVAVTQNFCSSQNFAAVWRKTRSGRKRMAVKWLKKLEISNPELAALAKKLNEKDNYIMYSKE 396          
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Match: A0A662YDJ8_9STRA (JmjC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDJ8_9STRA)

HSP 1 Score: 357 bits (915), Expect = 5.330e-119
Identity = 160/253 (63.24%), Postives = 200/253 (79.05%), Query Frame = 1
Query:    4 YGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRR-KHGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKEASSR 759
            Y   +LKCGEDDDG S+++K K+F+ Y+  Q DDSPLYIFDS FDD E  K LL D+ VP YFP+DLF LVGE RRPPYRWFLVGPKRSGT++H+DPLG+SAWNT++ GRK WVLFPPHV K +  GK  +R+GEDDE +NYF+DLLPR++R     ++   EF+QYPG+TVF+PGGWWHAVLN++D+VA+TQNFCS  NF  VWRKTR+GRK+M+VKWLK+L+++HP LA  A  LN +D +VM   E   R
Sbjct:  142 YKRVQLKCGEDDDGKSIRMKFKHFMSYLKRQNDDSPLYIFDSSFDDREDTKPLLSDYRVPKYFPEDLFELVGEDRRPPYRWFLVGPKRSGTTLHLDPLGSSAWNTLLVGRKRWVLFPPHVPKGLVNGKKHVRKGEDDEAVNYFMDLLPRLKRASSAETLGCIEFMQYPGETVFIPGGWWHAVLNVDDTVAVTQNFCSSQNFATVWRKTRSGRKRMAVKWLKKLEEQHPELAAMATELNQKDKYVMYGSEEHGR 394          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7521.18707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G461_ECTSI5.340e-18897.67JMJD6 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A8K1CVA6_PYTOL3.920e-12667.19Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3GT28_9STRA6.600e-12365.10Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
K3X3W1_GLOUD9.260e-12365.32JmjC domain-containing protein n=1 Tax=Globisporan... [more]
V9EZE5_PHYPR4.450e-12165.74JmjC domain-containing protein n=8 Tax=Phytophthor... [more]
A0A3M6VB54_9STRA1.740e-12064.82JmjC domain-containing protein n=2 Tax=Peronospora... [more]
A0A484E8M1_BRELC5.980e-12064.40JmjC domain-containing protein n=1 Tax=Bremia lact... [more]
G4ZR36_PHYSP9.650e-12063.49JmjC domain-containing protein n=9 Tax=Phytophthor... [more]
A0A0P1AHP6_PLAHL2.740e-11964.00Histone arginine n=1 Tax=Plasmopara halstedii TaxI... [more]
A0A662YDJ8_9STRA5.330e-11963.24JmjC domain-containing protein n=2 Tax=Nothophytop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7521contigEcto-sp13_S_contig7521:1184..3287 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score532.3
Seed ortholog evalue1.3e-148
Seed eggNOG ortholog2880.D7G461
Model size843
KEGG koko:K11323
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
EggNOG OGsKOG2130@1,KOG2130@2759
Cds size843
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464020.8418891-CDS-Ecto-sp13_S_contig7521:1183..12401681464020.8418891-CDS-Ecto-sp13_S_contig7521:1183..1240Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7521 1184..1240 +
1681464020.8555439-CDS-Ecto-sp13_S_contig7521:1595..17801681464020.8555439-CDS-Ecto-sp13_S_contig7521:1595..1780Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7521 1596..1780 +
1681464020.8695838-CDS-Ecto-sp13_S_contig7521:2012..21901681464020.8695838-CDS-Ecto-sp13_S_contig7521:2012..2190Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7521 2013..2190 +
1681464020.8795195-CDS-Ecto-sp13_S_contig7521:2603..27921681464020.8795195-CDS-Ecto-sp13_S_contig7521:2603..2792Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7521 2604..2792 +
1681464020.893284-CDS-Ecto-sp13_S_contig7521:3053..32871681464020.893284-CDS-Ecto-sp13_S_contig7521:3053..3287Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7521 3054..3287 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7521.18707.1prot_Ecto-sp13_S_contig7521.18707.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7521 1184..3287 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7521.18707.1

>prot_Ecto-sp13_S_contig7521.18707.1 ID=prot_Ecto-sp13_S_contig7521.18707.1|Name=mRNA_Ecto-sp13_S_contig7521.18707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=281bp
RYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEV
AKGLLEDFFVPDYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLG
TSAWNTVMSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPR
IRRKHGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNN
FEKVWRKTRTGRKKMSVKWLKELDQEHPSLAETARRLNSEDGFVMVHKEA
SSRRRSGHDGDDEGGRGKSKRKNKHGKRKGG
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mRNA from alignment at Ecto-sp13_S_contig7521:1184..3287+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7521.18707.1 ID=mRNA_Ecto-sp13_S_contig7521.18707.1|Name=mRNA_Ecto-sp13_S_contig7521.18707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2104bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7521:1184..3287+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTACGGGGATTGCAAGCTCAAGTGCGGGGAAGACGACGATGGCTATTC GGTCAAGGTATGTGCCCAACCACCAATCACGTGTGCAGGATCAACGTGCA CCCGGCGTACCCATCACTCCAGCTGTTATTTTTCTTATTTGTGTCGAGCA CATTGTGTTGGGGGCGAAGCTCAGAGGTCTACATGGCTCCGTATGCCGTA CTCCGTACATTCCTGTTGTTTTGAGGCCTCACAGGATCCGTACCGGCAGC CGACCTGTACGAGGGCCTTGGTCAAGCCACGCCTGTAATGAAGACCCGTC TACTCGACCGTAAGCTTTCACAGGCGAAATGCAGAGCTAGTACAGAGCAT CCTCTACCGTACGCCGCCGTCGGCATCGTTTGTGTGTTGATCGTGCGCAC GCTTCATTCCAGGTTAAGCTGAAGTACTTTCTGCGGTATATGGACCACCA AACGGACGACAGCCCACTGTACATCTTTGACAGCCACTTCGATGACCACG AGGTGGCAAAGGGCCTACTGGAGGACTTCTTTGTCCCTGACTATTTCCCT GATGACCTGTTTTCATTGGTCGGAGAGAGACGCCGACCGCCCTACAGGTG AATGATTCAGGATACCCGCCGCCTCTGCGGCCCACACGAAACACGGTAGA TATCCATGCTAAATAACACCGGCACTGCTGTGTAGTGAATCCGTCCCGGT GTTCCGATGTTTCCAGAGACGTCGATTCCTTCCGACGTTCGTCGTATGTA ACACACCTTGCGTTCCGATTCAGCGAGGAGCCAACACCGTTGGCTGACCC TCATGTCTACGTATCCCCGCTGGCCAAAGGTGGTTTTTGGTCGGCCCCAA GCGCTCTGGGACATCCGTGCATATCGACCCTCTTGGCACGAGCGCGTGGA ACACGGTCATGAGCGGAAGGAAGCTGTGGGTGCTTTTCCCACCGCATGTG GACAAGAATGTGGCCAAGGGAAAGGATGTCATCAGGCAGGGCGAAGACGA TGAACCGGTGAGACCTTGACCGAAGAGAGTCGCACTCCTGTGAAACGTTC ATATGTTCTAGTCCTCATGCGTCTGCGTGGAATGGATACATGGAGACGCG TTGCAACCCTTTGGCGGTTTATCATTGTGCCACATGCGCATTCCCCGCAC ATTTGCCACGTTTCAAAATTATATTCGGGGTGGATGAAGTGTCACTGAGT TTCTATCCTTGGAAACTGCTTCGCGTAGATTTGTTACTTTTGTGGTACGG GGACTACACAGGTCCCCGAAATGCATTCTGAACGTACCGTACAGCAGTGA TAGCGTTCGGTCGAACCCTGTATTGGACGCCCGCGCTCCTAGTTGGATTC TACCGTATCCATGTTGATGATGTGTGATGTGTCTCTCGTTTCTCTGTGTC GCGTTTCTTCGTTGTCGCAGATCAACTACTTCGTGGATCTGCTGCCTCGG ATACGACGAAAGCACGGCAACTCGATCAAGATTTACGAGTTCGTGCAGTA CCCCGGCGATACGGTTTTTGTTCCGGGCGGCTGGTGGCACGCGGTTCTGA ACCTCGAGGACAGTGTGGCCATCACTCAGAATTTCTGCAGTCGCAACAAC TTCGAAAAGGTGACGTGCGCCGACGTGTGATGACGGCCGGCTTTCCGCTT TTCCTGCGAATCGGACGGTTGTCGGCGTACTCATATCAGCAGGCAGGAAC GGTGACGAATATTGGCGTGTTTTCTATTTTCTCGCTCTCAGCTTCCCGCC GAGCCGGTCGCAATTGCACATCACCCGGTGCTCGCCGTACTGATCGGCGA AGATGAAGCTTGATCATTTTAATTGCCGTTTTCAAACCTAAGAAGCTAAA TCATGCGCTGATACGAGCAGGTCTGGCGGAAAACCCGGACTGGTCGGAAG AAGATGTCCGTCAAATGGCTGAAAGAGCTTGACCAGGAGCACCCGAGCCT CGCCGAAACGGCGCGCCGCCTCAACAGCGAGGACGGTTTCGTCATGGTGC ACAAGGAGGCGAGCAGCAGGCGTCGATCTGGCCATGATGGCGATGATGAA GGCGGCCGGGGGAAAAGCAAGCGAAAAAACAAGCACGGCAAACGAAAAGG TGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7521:1184..3287+

>mRNA_Ecto-sp13_S_contig7521.18707.1 ID=mRNA_Ecto-sp13_S_contig7521.18707.1|Name=mRNA_Ecto-sp13_S_contig7521.18707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=843bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7521:1184..3287+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTACGGGGATTGCAAGCTCAAGTGCGGGGAAGACGACGATGGCTATTC
GGTCAAGGTTAAGCTGAAGTACTTTCTGCGGTATATGGACCACCAAACGG
ACGACAGCCCACTGTACATCTTTGACAGCCACTTCGATGACCACGAGGTG
GCAAAGGGCCTACTGGAGGACTTCTTTGTCCCTGACTATTTCCCTGATGA
CCTGTTTTCATTGGTCGGAGAGAGACGCCGACCGCCCTACAGGTGGTTTT
TGGTCGGCCCCAAGCGCTCTGGGACATCCGTGCATATCGACCCTCTTGGC
ACGAGCGCGTGGAACACGGTCATGAGCGGAAGGAAGCTGTGGGTGCTTTT
CCCACCGCATGTGGACAAGAATGTGGCCAAGGGAAAGGATGTCATCAGGC
AGGGCGAAGACGATGAACCGATCAACTACTTCGTGGATCTGCTGCCTCGG
ATACGACGAAAGCACGGCAACTCGATCAAGATTTACGAGTTCGTGCAGTA
CCCCGGCGATACGGTTTTTGTTCCGGGCGGCTGGTGGCACGCGGTTCTGA
ACCTCGAGGACAGTGTGGCCATCACTCAGAATTTCTGCAGTCGCAACAAC
TTCGAAAAGGTCTGGCGGAAAACCCGGACTGGTCGGAAGAAGATGTCCGT
CAAATGGCTGAAAGAGCTTGACCAGGAGCACCCGAGCCTCGCCGAAACGG
CGCGCCGCCTCAACAGCGAGGACGGTTTCGTCATGGTGCACAAGGAGGCG
AGCAGCAGGCGTCGATCTGGCCATGATGGCGATGATGAAGGCGGCCGGGG
GAAAAGCAAGCGAAAAAACAAGCACGGCAAACGAAAAGGTGGC
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