prot_Ecto-sp13_S_contig7514.18702.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7514.18702.1
Unique Nameprot_Ecto-sp13_S_contig7514.18702.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length530
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7514.18702.1 vs. uniprot
Match: A0A6H5KL28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL28_9PHAE)

HSP 1 Score: 750 bits (1936), Expect = 1.080e-264
Identity = 468/520 (90.00%), Postives = 484/520 (93.08%), Query Frame = 0 
Query:    4 TEQLAQQFVVRTGDTGGTECTEPQLASVRWHRPVRGEERTVENAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAYTPSRSSRASSLAAGVVPAFAARVSSSLASKRNHGDREVGSGRSSLVAVGRTTSSRGRRSNDRGLSTAVSMSVEGWKIQPRGVGLPGGAFSRAGGWPPAVGDRRRTLAISAATTEGGGRFDSGELLKMGYRDLQKLAKENDVRANQAGEAIINDLVALGANPARGPDCNGEDVAVPATGESSDWVAGVLDEDIMAGVDLEADGEDDADGEGSETYAQAVKRATSGKFTATDMEGLKGGVDRGDGWVTFKLGKGDALGLDGDGDDXXXXXXXXXXXXXXXXXDDMDARIRDAEASRFRLSPEMMASSAEDFGFVRDVADLEKLSITVPTGCCPGCGSKFQSEDPASPGFLQLDKLDGLLGNEGGASKVMTAEGTRETAAVAADEADMDPEAWLEAQSDINTDLXXXXXXGDXXXXXXGGDPRREWVEGSYGSPAG 523
            TEQLAQQFV+RTGDTGGT+CTE QLASV WHRP RGEERTV NAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  YTPSRSSRASSLAAGV+PAFAARVSSSLASKRNHG+REVGSGRSSLVAVGR TSSRGRR+NDRG+STAVSMS E WKIQP G+GL GGAFSRAGGWPPAVGDRRRTLAISAATTEGG RFDS ELLKMGYRDLQKLAKENDVRANQAGEAI+NDL+ALGANPA+GPD NGEDVAVPA  ESSDWVAGVLDEDIMAGVDLEADGEDDADGE SETYAQAVKRATSGKFTATDMEGLKGGVDRGDGWVTFKLGKGD+LGLDG+GDDXXXXXXXXXXXXXXXXXDDMDARIRDAEASRFRLSPEMMASSAEDFGF RD ADLEKL+ITVPTGCCPGCGSKFQS+DPASPGFLQLDKLD LLGNEG A+ V TAE TRE AAVA DEADMDPEAWLEAQSDINTDLXXXXX  D  X   GGDPR E V+ SYGSPAG
Sbjct:   20 TEQLAQQFVIRTGDTGGTKCTELQLASVHWHRPFRGEERTVGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTPSRSSRASSLAAGVLPAFAARVSSSLASKRNHGEREVGSGRSSLVAVGRRTSSRGRRTNDRGVSTAVSMSAEVWKIQPWGLGLLGGAFSRAGGWPPAVGDRRRTLAISAATTEGGRRFDSAELLKMGYRDLQKLAKENDVRANQAGEAIVNDLLALGANPAKGPDSNGEDVAVPAMRESSDWVAGVLDEDIMAGVDLEADGEDDADGEDSETYAQAVKRATSGKFTATDMEGLKGGVDRGDGWVTFKLGKGDSLGLDGEGDDXXXXXXXXXXXXXXXXXDDMDARIRDAEASRFRLSPEMMASSAEDFGFGRDAADLEKLTITVPTGCCPGCGSKFQSDDPASPGFLQLDKLDDLLGNEGVAATVTTAEDTREAAAVATDEADMDPEAWLEAQSDINTDLXXXXXLADEDXEDDGGDPRGELVDRSYGSPAG 539
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BLAST of mRNA_Ecto-sp13_S_contig7514.18702.1 vs. uniprot
Match: D8LQR2_ECTSI (Lrc5, mitochondrial YqeH-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR2_ECTSI)

HSP 1 Score: 505 bits (1301), Expect = 3.470e-169
Identity = 283/313 (90.42%), Postives = 288/313 (92.01%), Query Frame = 0 
Query:  217 MGYRDLQKLAKENDVRANQAGEAIINDLVALGANPARGPDCNGEDVAVPATGESSDWVAGVLDEDIMAGVDLEADGEDDADGEGSETYAQAVKRATSGKFTATDMEGLKGGVDRGDGWVTFKLGKGDALGLDGDGDDXXXXXXXXXXXXXXXXXDDMDARIRDAEASRFRLSPEMMASSAEDFGFVRDVADLEKLSITVPTGCCPGCGSKFQSEDPASPGFLQLDKLDGLLGNEGGASKVMTAEGTRETAAVAADEADMDPEAWLEAQSDINTDLXXXXXXGDXXXXXXGGDPRREWVEGSYGSPAGVPAGGG 529
            MGYRDLQKLAKEND+RANQAGEAIINDLVALGANPARGPD NGEDVAVPATGESSDWVAGVLDEDIMAGVDLEADGEDDADGE SETYAQAVKRATSGKFTATDMEGLKGGVDRGDGWVTFKLGKGDALGLDG+GDDXXXXXXXXXXXXXXXXXDDMDARIRDAEASRFRLSPEM+ASSAEDFGF RD ADLEKL+ITVPTGCCPGCGSKFQSEDPASPGFLQLDKLDGLLGNE GA+ VMTAE TRE AAV  DEADMDPEAWLEAQSDINTDL      GD      GGDPR EWVEGSY SPAGVP GGG
Sbjct:    1 MGYRDLQKLAKENDIRANQAGEAIINDLVALGANPARGPDSNGEDVAVPATGESSDWVAGVLDEDIMAGVDLEADGEDDADGEDSETYAQAVKRATSGKFTATDMEGLKGGVDRGDGWVTFKLGKGDALGLDGEGDDXXXXXXXXXXXXXXXXXDDMDARIRDAEASRFRLSPEMIASSAEDFGFGRDAADLEKLTITVPTGCCPGCGSKFQSEDPASPGFLQLDKLDGLLGNEVGAATVMTAEDTREAAAVTTDEADMDPEAWLEAQSDINTDLDFDLDVGDEDDD--GGDPRGEWVEGSYASPAGVPTGGG 311
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7514.18702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KL28_9PHAE1.080e-26490.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQR2_ECTSI3.470e-16990.42Lrc5, mitochondrial YqeH-related GTPase n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7514contigEcto-sp13_S_contig7514:717..6948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7514.18702.1mRNA_Ecto-sp13_S_contig7514.18702.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7514 717..6948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7514.18702.1 ID=prot_Ecto-sp13_S_contig7514.18702.1|Name=mRNA_Ecto-sp13_S_contig7514.18702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=530bp
QRGTEQLAQQFVVRTGDTGGTECTEPQLASVRWHRPVRGEERTVENAAAA
MRAASGKQQQSRQPRNSTTACLVTLLSGGGGSMAAAAGAYTPSRSSRASS
LAAGVVPAFAARVSSSLASKRNHGDREVGSGRSSLVAVGRTTSSRGRRSN
DRGLSTAVSMSVEGWKIQPRGVGLPGGAFSRAGGWPPAVGDRRRTLAISA
ATTEGGGRFDSGELLKMGYRDLQKLAKENDVRANQAGEAIINDLVALGAN
PARGPDCNGEDVAVPATGESSDWVAGVLDEDIMAGVDLEADGEDDADGEG
SETYAQAVKRATSGKFTATDMEGLKGGVDRGDGWVTFKLGKGDALGLDGD
GDDDYFDDDDDYNDEEGGGGDDMDARIRDAEASRFRLSPEMMASSAEDFG
FVRDVADLEKLSITVPTGCCPGCGSKFQSEDPASPGFLQLDKLDGLLGNE
GGASKVMTAEGTRETAAVAADEADMDPEAWLEAQSDINTDLDFDLDLGDE
DDDDDGGDPRREWVEGSYGSPAGVPAGGG*
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