mRNA_Ecto-sp13_S_contig751.18699.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig751.18699.1
Unique NamemRNA_Ecto-sp13_S_contig751.18699.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig751.18699.1 vs. uniprot
Match: D7FXZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ6_ECTSI)

HSP 1 Score: 1332 bits (3447), Expect = 0.000e+0
Identity = 1306/1769 (73.83%), Postives = 1328/1769 (75.07%), Query Frame = 1
Query:   28 AKSPVFGSGGAGSLVFGSGSLVDPTSAEKKGAGGGAAKALXXXXXXXAKPAFXAGSSSPFGSFMSPPAAGAKAQATAGFGSFASSTAPTGGGFXXLSKGAGLXXXASSGDAPAPAGGAEKKTAAAPAAAAPASTYPPMSAKAPSTFGEAAKKKNXXXXXXXXXXXXXXXXXXXXXXAPAPAPAAASAKKPAXXXXXXXXXXXXXXXXXXXXAXAX--------------------------APXTXXXXXXXXXXXXXXXXXXXXXXXXXATPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AKAPAXXPAEAPASSXAXXXXXXXXXXXXXAGAAKDSATGSGGAAAKPLAFGXXXXAPATPAATGGGFSFGSPKGTVAGAPPSAXXXXXXXQAKAKQPALSFAAPTASSAGXXXXXXXXXXXXXXXXXXXXXXKASGAFSFGSPKGASSKASTGSTGXXXXSPKAKPKAPPASPAVAADAKKPSPSSXXXSAYPPMSSTAPSVFGATSKPAAKPAAPAKPSAATASGSGGGG------GAXXXXXXXXXXXXXXPAAAAKPAGATPAVAPAKSXXPAQVAFKKGTAATSSPYPPMSKTAPAVFGSSAXXXXXXXXXXXXXXXXXXXXGAYXXXXXXXXXXXXXAKPQPTAAVAKAVPAPSSLKPSSPPPPSSSASAXXXXXXXXXXXXXXGSTTAXXXXXAAPAPTKPTTTAKPASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPQAKTSAPGLFGTGSSNPFGGAKPAASIFASTSGAKSSTTFGXTSKPTFGGSGAGGGFAGSLSFGQPQQXXXXXXXXXXXXXXXQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGARHASSSGGLFGGASLAAAASVPLPTETKAAAPVDVRSAASVLPAAAAALARVGGDRRGRGKNESKEWEQDFGXXXXXXXXXXXXEFGVPEIPVIRSPRRPQPAGGREGGGVAAPAVRRAVPCTAAEGIAWKNVLEVLGHLRDLREQGEAGLLRDPAWRDGMERGMSGLRDTVGRRLREAVSKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKYDEAGQGEQREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNATLKSRRERGPDVAINPAANGRSANGQSATRTPQGPPSRYAAAVTPASSRREAASPLPGSARSRAGXXXXXXHVRGGAIHGVLPRTRRGARSXXXXXXXXXXXVPGSAXXXXSFATPERGVAPPSAASQRXXSLGVGGGTPSASVPSPAPGSTASSRASXXXXXXXXXXXXXXXXXXXXXESGELVVAMAAAERPGLRLMRIVGSQYDATDGVEAMVAKAEAKVKQLESAAVTMAATTXXXXXXXXKSGRAGRITLSSSSASPGERSEGALG-SSSTSAMIAVGGKEREDALARGRRLRREREGLALLAKETARLSFSFPIREVGRTVTQDELAEKLGNKPSTIATPQQQQRTPSRLVTSGRGPGSVHQPSSASSRRDLVSASPSMGAAGAAAAAKISGAGSATA--AATPSRGFGGVFSSLKPAATXXXXXXXXXXXXXXXXXXXXXXQMTRTMSVRDAGLSPGAGVRRERSGGFAARTSGGETKRTSPATFAFGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---MAATAPSVFGGAKKTPTPAAAPAAPATAXXXXXXXXXXXXKPAKPAGGTSSFPPM 5217
            AKSPVFGSGGAGSLVFGSGSLVDPTSAEKKGAGGGAAKA        AKPAF AGSSSPFGSFMSPPAAGAKAQATAGFGSFASSTAP GGGF  LSKGAGL   AS GDA AP GGAEKKTAAAPAAAAPASTYPPMSAKA   FGE AKK  XXXXXXXXXXXXXXXXXXXXX APAPAPAAA+AKKPAXXXXXXXXXXXXXXXXXXX A A                           A X XXXXXXXXXXXXXXXXXXXXXXXXX TPAXXXXXXXX        XXXXXXXXXXXXXXXXX AKA A   A+APA + A XXXXXXXXXXXX  AAKD A GSGGAAAKPLAFG       TPAATGGGFSFGSPKGTVAGAPPS+       QAKAKQPALSFAAPTA S G                      KASGAFSFGSPKGASSKA TGST XXXX   AK KAPPA+PAVAADAKK S SS    AYPPMSSTAPSVFGAT+KP AKP APAKPSAAT              GA XXXXXXXXXXXXXPAAAAKPAGATPAVAPA  XX AQVAFKKGTAA SSPYPPMSKTAPAVFGSSAXXXXXXXXXXXXXXXXXX  GAYXXXXXXXXXXXXXAKPQPTAA  KAV A                  XXXXXXXXXXXXXXGSTTA     AAPAPTKPTTTAKPASSG XXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                                              SGGLFGGASLAAAASVPLPTE KAAA VDVRSAASVLPAAAAALAR+GG RRGRGKNE+KEWEQDF XXXXXXXXXX  EFGVPEIP +RSPRRPQ  GGREGGGVAAPAVRRAVP TAAEGIAWKNVLEVL HLRDL+ QGEAGLLRDPAW+DGMERG+ GLRDTVGR LREAVSKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKY EAG+GE+REEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNATLKSRRERGPDVAINPAANGR AN QSATRTPQGPPSR+AA VTPASSRREAASPLPGSARSRAG      HVRGGAIHGVLPRTRRGAR            VPG+A    SFATPERGVAPPSAASQR  SLGVGGGTPSASVPSP+PGST SSRAS       XXXXXXXXXXXXXX          A ERPGLRLMRIVGSQYDATDGVEAMVAKAEAKVKQLE AA T+AA  XXXXXXXX                           SSST AMIA+GGKEREDALARGRRLRREREGLALLAKETARLSFSFPIREVGRTVTQDELA+KLGNKPSTIATPQQQQ+TPSRLVTSGRGPGSVHQPSSASSRR LVSASPSMGAAGA AAAK           AATPSRGFG VFSS KP  T XXXXXXX  XXXXXXXXXXX  MTRT SV DAG   G GVRRERSGGFA  TSGGET+RTSPATFAFGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MAATAPSVFGGAKKTPTPAAAP      XXXXXXXX    KPAKPAGGTS F PM
Sbjct:  576 AKSPVFGSGGAGSLVFGSGSLVDPTSAEKKGAGGGAAKAFGWGGFG-AKPAFGAGSSSPFGSFMSPPAAGAKAQATAGFGSFASSTAPAGGGFGSLSKGAGLFGSASGGDARAPKGGAEKKTAAAPAAAAPASTYPPMSAKAXXAFGEVAKKXXXXXXXXXXXXXXXXXXXXXXXGAPAPAPAAAAAKKPAXXXXXXXXXXXXXXXXXXXAAAAAKKPXXXXXXXXXXXXXXXXXXXXXAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAXXXXXXXXSKPLAAATXXXXXXXXXXXXXXXXXXAKAAAKAAAKAPAKAPAYXXXXXXXXXXXXXDAAKDPAKGSGGAAAKPLAFGGTAAXXXTPAATGGGFSFGSPKGTVAGAPPSSGFSLGSPQAKAKQPALSFAAPTALSTGAPAPAATSSGFSFGGGAPPP--KASGAFSFGSPKGASSKAGTGSTXXXXXXXXAKSKAPPAAPAVAADAKKTSSSS----AYPPMSSTAPSVFGATAKPPAKPVAPAKPSAATTXXXXXXXXXXXXXGAYXXXXXXXXXXXXXPAAAAKPAGATPAVAPAXXXXXAQVAFKKGTAAASSPYPPMSKTAPAVFGSSAXXXXXXXXXXXXXXXXXXAGGAYXXXXXXXXXXXXXAKPQPTAAGTKAV-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTTAA----AAPAPTKPTTTAKPASSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------------------------------XXSGGLFGGASLAAAASVPLPTEKKAAATVDVRSAASVLPAAAAALARIGGGRRGRGKNEAKEWEQDF-XXXXXXXXXXGEEFGVPEIPGMRSPRRPQSVGGREGGGVAAPAVRRAVPSTAAEGIAWKNVLEVLEHLRDLQGQGEAGLLRDPAWKDGMERGICGLRDTVGR-LREAVSKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKY-EAGEGERREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNATLKSRRERGPDVAINPAANGRGANSQSATRTPQGPPSRHAA-VTPASSRREAASPLPGSARSRAGGGG---HVRGGAIHGVLPRTRRGARGGGGGDATEAAPVPGTAGSSSSFATPERGVAPPSAASQRRRSLGVGGGTPSASVPSPSPGSTVSSRASRRRVSVAXXXXXXXXXXXXXXXXXXXXXXXXA-ERPGLRLMRIVGSQYDATDGVEAMVAKAEAKVKQLERAAATVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSTLAMIAIGGKEREDALARGRRLRREREGLALLAKETARLSFSFPIREVGRTVTQDELAKKLGNKPSTIATPQQQQQTPSRLVTSGRGPGSVHQPSSASSRRGLVSASPSMGAAGAVAAAKXXXXXXXXXXXAATPSRGFGSVFSSPKPTPTAXXXXXXXPSXXXXXXXXXXX--MTRTTSVLDAGSGQGGGVRRERSGGFATGTSGGETQRTSPATFAFGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPPMAATAPSVFGGAKKTPTPAAAPXXXXXXXXXXXXXXAAAAKPAKPAGGTSRFQPM 2213          
BLAST of mRNA_Ecto-sp13_S_contig751.18699.1 vs. uniprot
Match: A0A6H5JBC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC0_9PHAE)

HSP 1 Score: 1215 bits (3144), Expect = 0.000e+0
Identity = 1276/1714 (74.45%), Postives = 1296/1714 (75.61%), Query Frame = 1
Query:   28 AKSPVFGSGGAGSLVFGSGSLVDPTSAEKKGAGGGAAKALXXXXXXXAKPAFXAGSSSPFGSFMSPPAAGAKAQATAGFGSFASSTAPTGGGFXXLSKGAGLXXXASSGDAPAPAGGAEKKTAAAPAAAAPASTYPPMSAKAPSTFGEAAKKKNXXXXXXXXXXXXXXXXXXXXXXAPAPAPAAASAKKPAXXXXXXXXXXXXXXXXXXXXAXAXAPXTXXXXXXXXXXXXXXXXXXXXXXXXXATPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAPAXXPAEAPASSXAXXXXXXXXXXXXXAGAAKDSATGSGGAAAKPLAFGXXXXAPATPAATGGGFSFGSPKGTVAGAPPSAXXXXXXXQAKAKQPALSFAAPTASSAGXXXXXXXXXXXXXXXXXXXXXX--KASGAFSFGSPKGASSKASTGSTGXXXXSPKAKPKAPPASPAVAADAKKPSPSSXXXS-----AYPPMSSTAPSVFGATSKPAAKPAAPAKPSAATASGSGGGGGAXXXXXXXXXXXXXXPAAAAKPAGATPAVAPAKSXXPAQVAFKKGTAATSSPYPPMSKTAPAVFGSSAXXXXXXXXXXXXXXXXXXXXGAYXXXXXXXXXXXXXAKPQPTAAVAKAVPAPSSLKPSSPPPPSSSASAXXXXXXXXXXXXXXGSTTAXXXXXAAPAPT-KPTTTAKPASSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPQAKTSAPGLFGTGSSNPFGGAKPAASIFASTSGAKSSTTFGXTSKPTFGGSGAGGGFAGSLSFGQPQQXXXXXXXXXXXXXXXQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGARHASSSGGLFGGASLAAAASVPLPTETKAAAPVDVRSAASVLPAAAAALARVGGDRRGRGKNESKEWEQDFGXXXXXXXXXXXXEFGVPEIPVIRSPRRPQPAGGREGGGVAAPAVRRAVPCTAAEGIAWKNVLEVLGHLRDLREQGEAGLLRDPAWRDGMERGMSGLRDTVGRRLREAVSKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKYDEAGQGEQREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNATLKSRRERGPDVAINPAANGRSANGQSATRTPQGPPSRYAAAVTPASSRREAASPLPGSARSRAGXXXXXXHVRGGAIHGVLPRTRRGARSXXXXXXXXXXXVPGSAXXXXSFATPERGVAPPSAASQRXXSLGVGGGTPSASVPSPAPGSTASSRASXXXXXXXXXXXXXXXXXXXXXESGELVVAMAAAERPGLRLMRIVGSQYDATDGVEAMVAKAEAKVKQLESAAVTMAATTXXXXXXXXKSGRAGRITLSSSSASPGERSEGALGSSSTSAMIAVGGKEREDALARGRRLRREREGLALLAKETARLSFSFPIREVGRTVTQDELAEKLGNKPSTIATPQQQQRTPSRLVTSGRGPGSVHQPSSASSRRDLVSASPSMGAAGAAAAAKISGAGSATA--AATPSRGFGGVFSSLKPAATXXXXXXXXXXXXXXXXXXXXXXQMTRTMSVRDAGLSPGAGVRRERSGGFAARTSGGETKRTSPATFAFGS-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAATAPSVFGGAKKTPTPAAAPAAPATA 5136
            AKSPVFGSGGAGSLVFGSGSLVDPTSAEKKGAGGGAAKA        AKPAF  GSSSPFGSFMSPPAAGAKAQATAGFGSFASST+P GGGF  L KG+GL   AS  DAPAP+GGAEKKTAAAP AAAPASTYPPMSAKA   FG       XXXXXXXXXXXXXXXXXXXXXXAPAPAPAAA+AK PA  XXXXXXXXXXXXXXXXX                                   TPA XXXXXX      XXXXXXXXXXXXXXXXXXXXAKAPA        SS  XXXXXXXXXXXXX G AKD A GSGGAAAKPL  G    A ATPA+TGGGFSFGSP+GTVAGAPPS+XXXXXXXQAKAKQPALSFAAP ASSAG XXXXXXXXXXX            KAS                     XXXX  KAKPKAPPA+PAVAAD KK     XXX      AY PMSSTAPSVFGAT+KPA             A+ SGG    XXXXXXXXXXXXXXPAAAAK AGATP       XX  QVAFKKGTAA SSPYPPMSKTAPAVFGSSA  XXXXXXXXXXXXXXXXXXGAYXXXXXXXXXXXXXA+PQP AAVAKAVPAPSS K         SAS XXXXXXXXXXXXXX     XXXXX       KPTTTAKPASSG XXXXXXXXXXXXXXXXXXXXXXXXXXX          GLFGTGSSNPFG AKP ASIFASTSGA SST FG TSKPTFGGSG GGGFAGSLSFGQPQQXXXXXXXXXXXXXXX   XXXXXXXXXXXXXX                    AS SGGL  G SLAA                                                       XXXXXXXXXXXXEFGVPEIPV+RSPRRPQ  GGREGGGVAAPAVRRAVP TAAEGIAWKNVLEVL HLRDLREQGEAGLLRD AW DGMERG+ GLRDTVGR LREAV+KLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKYDE G+GE+REEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNATLKSRRERGPDVAINPAANGRSA GQSATRT QGPPSR+AAA TPASSRREAASPLPGSARSRA       HVRGGAIHGVLPRTRRGARS XXXX   XXX     XXXX FATPERGVAPPSAASQR XSLGVGGGTPSASVP  APGSTASSRAS           XXXXXXXXXX   ELVVA A AERPGLRLMRIVGSQYDATDGVEAMVAKAEAKVKQLE AAVT+AATTXXXXXXXX                          SS TSAMIAVGG+ERE+ALARGRRLRREREGLALLAKETARLSFSFPIREVGRTVTQDELA KLGNKPSTIATPQQQQRTPSRLVTSGRGPGSVHQPSSASSRRDLVSASPSMGAAG                 AATPSRGFGGVFSS  PA TXXXXXXXXXXXXXXXXXXXXX  MTRT SV  AG   G GVRRERSG FAA TSGGETKRTSPATFAFGS A   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXMAATAPSVFGGAKKTPTPAA   AP  A
Sbjct:  403 AKSPVFGSGGAGSLVFGSGSLVDPTSAEKKGAGGGAAKAFGFGGGFGAKPAFGVGSSSPFGSFMSPPAAGAKAQATAGFGSFASSTSPAGGGFGSLGKGSGLFGSASGDDAPAPSGGAEKKTAAAPTAAAPASTYPPMSAKAXXXFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPAPAAAAAKTPATTXXXXXXXXXXXXXXXXX-----------------------------------TPAAXXXXXXSKPLAAXXXXXXXXXXXXXXXXXXXXAKAPA--------SSPXXXXXXXXXXXXXXXGNAKDPAKGSGGAAAKPLTLGGTAAAAATPASTGGGFSFGSPEGTVAGAPPSSXXXXXXXQAKAKQPALSFAAPPASSAGAXXXXXXXXXXXSGFSFGVGAPPPKASXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKPKAPPAAPAVAADTKKXXXXXXXXXXXXXXAYLPMSSTAPSVFGATAKPA------------VATTSGGXXXXXXXXXXXXXXXXXXPAAAAKAAGATPXXXXXXXXXXXQVAFKKGTAAASSPYPPMSKTAPAVFGSSAAPXXXXXXXXXXXXXXXXXXGAYXXXXXXXXXXXXXAEPQPIAAVAKAVPAPSSSKXXXXXXXXXSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTTTAKPASSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLFGTGSSNPFGDAKPTASIFASTSGATSSTVFGGTSKPTFGGSGVGGGFAGSLSFGQPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------QASXSGGLLVGVSLAAXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFGVPEIPVMRSPRRPQSVGGREGGGVAAPAVRRAVPSTAAEGIAWKNVLEVLEHLRDLREQGEAGLLRDSAWVDGMERGICGLRDTVGR-LREAVNKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKYDETGEGERREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNATLKSRRERGPDVAINPAANGRSAIGQSATRTLQGPPSRHAAADTPASSRREAASPLPGSARSRAAGGG---HVRGGAIHGVLPRTRRGARSGXXXXATEXXXXXXXXXXXXXFATPERGVAPPSAASQRRXSLGVGGGTPSASVPCSAPGSTASSRASRRRVSVAGRSNXXXXXXXXXXXXXELVVA-AVAERPGLRLMRIVGSQYDATDGVEAMVAKAEAKVKQLERAAVTVAATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSS-TSAMIAVGGQEREEALARGRRLRREREGLALLAKETARLSFSFPIREVGRTVTQDELATKLGNKPSTIATPQQQQRTPSRLVTSGRGPGSVHQPSSASSRRDLVSASPSMGAAGXXXXXXXXXXXXXXXXXAATPSRGFGGVFSSPNPATTXXXXXXXXXXXXXXXXXXXXX--MTRTTSVVHAGSRLGGGVRRERSGAFAAGTSGGETKRTSPATFAFGSPAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXMAATAPSVFGGAKKTPTPAAPATAPVPA 2033          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig751.18699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXZ6_ECTSI0.000e+073.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBC0_9PHAE0.000e+074.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig751contigEcto-sp13_S_contig751:876..11379 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size5238
Hectar predicted targeting categoryother localisation
Exons9
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-09_002490.1
Cds size5238
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig751.18699.1prot_Ecto-sp13_S_contig751.18699.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig751 876..11379 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464019.7568243-CDS-Ecto-sp13_S_contig751:875..37711681464019.7568243-CDS-Ecto-sp13_S_contig751:875..3771Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig751 876..3771 +
1681464019.7684162-CDS-Ecto-sp13_S_contig751:4020..41981681464019.7684162-CDS-Ecto-sp13_S_contig751:4020..4198Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig751 4021..4198 +
1681464019.779289-CDS-Ecto-sp13_S_contig751:4588..46881681464019.779289-CDS-Ecto-sp13_S_contig751:4588..4688Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig751 4589..4688 +
1681464019.7898705-CDS-Ecto-sp13_S_contig751:6342..64921681464019.7898705-CDS-Ecto-sp13_S_contig751:6342..6492Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig751 6343..6492 +
1681464019.8010926-CDS-Ecto-sp13_S_contig751:7362..77131681464019.8010926-CDS-Ecto-sp13_S_contig751:7362..7713Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig751 7363..7713 +
1681464019.812541-CDS-Ecto-sp13_S_contig751:8321..86811681464019.812541-CDS-Ecto-sp13_S_contig751:8321..8681Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig751 8322..8681 +
1681464019.9862802-CDS-Ecto-sp13_S_contig751:9285..95761681464019.9862802-CDS-Ecto-sp13_S_contig751:9285..9576Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig751 9286..9576 +
1681464020.0010076-CDS-Ecto-sp13_S_contig751:10238..103961681464020.0010076-CDS-Ecto-sp13_S_contig751:10238..10396Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig751 10239..10396 +
1681464020.0121698-CDS-Ecto-sp13_S_contig751:10625..113791681464020.0121698-CDS-Ecto-sp13_S_contig751:10625..11379Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig751 10626..11379 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig751.18699.1

>prot_Ecto-sp13_S_contig751.18699.1 ID=prot_Ecto-sp13_S_contig751.18699.1|Name=mRNA_Ecto-sp13_S_contig751.18699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1746bp
QPPAPTLVPAKSPVFGSGGAGSLVFGSGSLVDPTSAEKKGAGGGAAKALG
FGGGFGAKPAFGAGSSSPFGSFMSPPAAGAKAQATAGFGSFASSTAPTGG
GFGSLSKGAGLFGSASSGDAPAPAGGAEKKTAAAPAAAAPASTYPPMSAK
APSTFGEAAKKKNPPTAAAAPGYPPMSAKAPGVFGAPAPAPAAASAKKPA
ATAPGYPPMSAKAPGVFGAPAPAPAPATAAAKKPAAAAPGYPPMSSKAPT
TFGATPAAAPATAKSKQLAAATPAPGYPPMSSAAPSVFGTAKAPAKAPAE
APASSPAYPPMSATAPSVFGAGAAKDSATGSGGAAAKPLAFGGAAAAPAT
PAATGGGFSFGSPKGTVAGAPPSAGFSFGSPQAKAKQPALSFAAPTASSA
GAPAPAVAASSGFSFGVGAPPPPKASGAFSFGSPKGASSKASTGSTGFSF
GSPKAKPKAPPASPAVAADAKKPSPSSSSSSAYPPMSSTAPSVFGATSKP
AAKPAAPAKPSAATASGSGGGGGAYPPMSVAAPSVFGAPAAAAKPAGATP
AVAPAKSATPAQVAFKKGTAATSSPYPPMSKTAPAVFGSSAAPAASAAAA
PKKTAGGGGGGGAYPPMSAKAPAVFGSAKPQPTAAVAKAVPAPSSLKPSS
PPPPSSSASAYPPMSTKAPAVFGGGSTTAAAATAAAPAPTKPTTTAKPAS
SGGYPPMSTTAPSVFRAPAVAATAAATAAATAPQAKTSAPGLFGTGSSNP
FGGAKPAASIFASTSGAKSSTTFGGTSKPTFGGSGAGGGFAGSLSFGQPQ
QQPSQQPSQQPSQQPSQQQQQQKNNTSAATPAAAATAAIPPAKGAAGGTG
ARHASSSGGLFGGASLAAAASVPLPTETKAAAPVDVRSAASVLPAAAAAL
ARVGGDRRGRGKNESKEWEQDFGGGDDDDDDDEEEEFGVPEIPVIRSPRR
PQPAGGREGGGVAAPAVRRAVPCTAAEGIAWKNVLEVLGHLRDLREQGEA
GLLRDPAWRDGMERGMSGLRDTVGRRLREAVSKLSQNTAAQVEEMATLKA
NNKDIKWQTTTAQDLLKYDEAGQGEQREEGEDDGGGLDNGRDTLDADLVE
IRKRIRENRSKIEAAKSDLNATLKSRRERGPDVAINPAANGRSANGQSAT
RTPQGPPSRYAAAVTPASSRREAASPLPGSARSRAGGGGGGGHVRGGAIH
GVLPRTRRGARSGGGGGATEAAPVPGSAGSSSSFATPERGVAPPSAASQR
RRSLGVGGGTPSASVPSPAPGSTASSRASRRRVSVAGGSNGGGGTVPGGG
ESGELVVAMAAAERPGLRLMRIVGSQYDATDGVEAMVAKAEAKVKQLESA
AVTMAATTAAAAAAASKSGRAGRITLSSSSASPGERSEGALGSSSTSAMI
AVGGKEREDALARGRRLRREREGLALLAKETARLSFSFPIREVGRTVTQD
ELAEKLGNKPSTIATPQQQQRTPSRLVTSGRGPGSVHQPSSASSRRDLVS
ASPSMGAAGAAAAAKISGAGSATAAATPSRGFGGVFSSLKPAATAAASAA
TAPSGATTTTTTTGGGQMTRTMSVRDAGLSPGAGVRRERSGGFAARTSGG
ETKRTSPATFAFGSAAAAPAAATAAAASSKPATVATPSALLFDSGAAGAP
AKKAAPGAQDKKPAPPPAAAAASATKSSSSSYPPMAATAPSVFGGAKKTP
TPAAAPAAPATAPVPAAAAPAAAAKPAKPAGGTSSFPPMASVAPSV
back to top

mRNA from alignment at Ecto-sp13_S_contig751:876..11379+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig751.18699.1 ID=mRNA_Ecto-sp13_S_contig751.18699.1|Name=mRNA_Ecto-sp13_S_contig751.18699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig751:876..11379+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCCCCCCGCCCCAACTCTCGTCCCAGCGAAGAGCCCGGTGTTCGGCAG CGGCGGCGCCGGCTCGCTCGTTTTCGGGTCCGGATCTCTCGTAGACCCCA CCTCCGCTGAGAAGAAGGGGGCCGGAGGAGGGGCCGCGAAAGCCCTCGGG TTCGGGGGTGGGTTCGGTGCGAAGCCGGCGTTTGGCGCTGGTTCTTCCTC TCCGTTCGGATCGTTCATGTCGCCGCCCGCGGCAGGCGCGAAGGCGCAGG CGACGGCCGGTTTCGGCAGCTTCGCGTCGTCGACGGCTCCCACCGGAGGC GGGTTCGGATCGCTTAGTAAAGGGGCCGGTCTGTTCGGCAGCGCGAGCAG CGGCGACGCTCCTGCTCCTGCTGGGGGGGCGGAGAAAAAGACCGCGGCGG CACCGGCCGCGGCGGCACCGGCGTCTACTTATCCCCCCATGAGCGCCAAG GCTCCTTCCACCTTCGGAGAAGCGGCGAAGAAGAAGAACCCGCCGACGGC GGCAGCAGCCCCGGGGTACCCGCCCATGAGCGCCAAGGCGCCCGGGGTGT TTGGCGCGCCTGCCCCCGCTCCTGCCGCAGCTTCTGCCAAGAAGCCCGCT GCAACAGCCCCAGGGTACCCGCCTATGAGCGCCAAGGCGCCCGGGGTATT TGGCGCTCCTGCTCCTGCTCCCGCTCCTGCCACCGCTGCTGCCAAGAAGC CGGCCGCAGCAGCTCCGGGGTACCCGCCCATGAGCAGCAAGGCGCCGACC ACTTTCGGGGCGACGCCGGCGGCAGCCCCTGCCACGGCGAAGAGTAAGCA ACTCGCCGCAGCAACGCCGGCCCCCGGCTACCCGCCCATGAGCTCCGCGG CTCCCTCGGTGTTCGGGACGGCGAAGGCGCCCGCGAAAGCGCCCGCGGAG GCACCGGCGTCGTCGCCGGCGTACCCACCCATGAGCGCCACCGCGCCGTC GGTGTTCGGCGCGGGTGCCGCCAAGGATTCCGCCACAGGAAGCGGCGGTG CCGCCGCCAAGCCGCTGGCGTTCGGAGGGGCCGCCGCTGCCCCTGCCACT CCTGCTGCGACGGGCGGCGGGTTCTCGTTTGGGTCGCCGAAGGGGACGGT CGCCGGGGCGCCGCCGAGCGCGGGGTTTTCCTTCGGGTCCCCGCAGGCGA AGGCTAAGCAGCCGGCGCTCTCGTTTGCGGCGCCAACGGCGTCATCAGCC GGCGCCCCGGCCCCGGCGGTGGCGGCCTCTTCAGGGTTTTCTTTCGGGGT GGGGGCACCGCCGCCGCCGAAGGCCTCCGGGGCGTTTTCGTTTGGGTCGC CGAAAGGAGCGAGCTCGAAGGCGTCGACGGGTTCGACGGGGTTCTCGTTT GGTTCCCCCAAGGCGAAGCCTAAAGCGCCGCCGGCATCCCCTGCTGTCGC CGCGGACGCCAAGAAGCCGTCGCCGTCATCGTCGTCGTCGTCTGCATATC CGCCCATGAGCAGTACCGCTCCCTCCGTGTTTGGAGCAACATCTAAGCCG GCGGCCAAACCGGCCGCGCCGGCGAAGCCGTCGGCAGCAACAGCCTCTGG AAGTGGTGGTGGTGGCGGAGCATATCCGCCCATGAGCGTCGCGGCCCCGT CGGTATTTGGAGCGCCGGCGGCCGCCGCAAAGCCGGCGGGGGCGACGCCG GCCGTGGCTCCGGCGAAGTCGGCGACACCGGCGCAGGTCGCGTTCAAGAA AGGCACCGCCGCTACTTCCTCTCCATACCCACCAATGAGCAAGACTGCAC CGGCGGTTTTTGGATCTTCTGCTGCTCCTGCTGCTTCTGCAGCAGCAGCA CCGAAGAAAACCGCCGGCGGGGGCGGAGGCGGGGGCGCCTACCCGCCGAT GAGCGCGAAGGCTCCAGCGGTGTTCGGGTCCGCGAAACCGCAGCCCACCG CCGCTGTTGCGAAAGCCGTTCCCGCACCGTCTAGCTTGAAGCCTTCTTCT CCCCCTCCCCCCTCGTCGTCGGCGTCGGCGTACCCGCCCATGAGCACGAA AGCGCCCGCCGTTTTCGGCGGCGGCAGCACCACCGCCGCCGCCGCCACCG CCGCCGCGCCAGCGCCAACCAAACCCACGACCACCGCGAAGCCCGCCTCG TCGGGCGGGTACCCCCCCATGAGCACGACGGCGCCTTCGGTGTTCCGAGC GCCTGCAGTCGCGGCAACGGCGGCGGCGACGGCGGCGGCGACGGCTCCCC AGGCCAAGACGTCGGCTCCGGGGCTGTTCGGCACTGGGAGTAGTAACCCG TTCGGCGGCGCGAAGCCGGCCGCCAGCATCTTTGCTTCGACGTCCGGGGC AAAGTCTTCCACGACGTTCGGGGGGACATCGAAGCCGACGTTTGGCGGTA GCGGCGCGGGTGGCGGCTTTGCGGGCTCGTTGAGCTTCGGGCAGCCGCAG CAGCAGCCTTCGCAGCAGCCTTCGCAGCAGCCTTCGCAGCAGCCTTCGCA GCAGCAGCAACAGCAGAAGAACAATACGTCTGCGGCTACCCCGGCCGCCG CCGCCACTGCTGCTATCCCGCCTGCCAAGGGCGCGGCGGGTGGTACAGGA GCGCGTCACGCGTCGTCGTCGGGCGGCCTCTTCGGCGGTGCGTCGTTGGC AGCAGCGGCGTCCGTTCCCCTGCCGACCGAAACGAAGGCGGCGGCGCCGG TGGACGTCCGCTCCGCTGCTTCGGTGTTGCCGGCGGCAGCGGCGGCGTTG GCGCGGGTCGGAGGGGACCGCAGAGGGAGGGGCAAGAACGAATCGAAGGA ATGGGAGCAGGACTTCGGGGGCGGGGACGACGACGACGACGACGACGAAG AAGAGGAGTTCGGGGTGCCCGAGATCCCAGTGATAAGGTCGCCGCGCCGG CCGCAGCCGGCGGGAGGACGGGAAGGCGGCGGTGTCGCCGCGCCAGGTAC AAGACGCACCCACTCCTTTCCAATCGTCTTCATGCATGCAGTTGTGCAAT TTTTACTGCCGCCGCCCCCCCTCCCATTGTCCCTCCACATGTACGGCGTG GCGGATGGTATAGTGTCTTTTTGTATGAGCCCGTTAATACTCTCCACCTA CCCCCTGGCCAGTTGATACGAGGTCACAGGACAAGCACCAGCAACATCGC AGTACCCCGCCTCCTGTGTGTGCCCCCGAACGAACCGACCGACAGCGGTG CGAAGAGCGGTTCCGTGTACGGCGGCGGAGGGCATCGCGTGGAAGAACGT TCTGGAGGTTCTGGGGCATCTTCGGGACCTGCGGGAGCAAGGCGAGGCGG GGCTGCTGCGAGACCCGGCGTGGAGGGACGGCATGGAGAGGGGTATGAGC GGGTTGCGGGACACCGTCGGCAGGTGAAGGTTGTGGAGAACCAGCAGAGA GAGACGGAGACATGAGGCAGACAGTTGTAGAGGTGGAAAGAGAGGAAGAA ACAGGGAGTACAGGCAGAGAAAAAGGAACGGGAGGTAAGGGAACGGAGGC TTGGTTTGACAATGTTTCTCCCTTTTATTTGTTTCTTTCTTGTGTGTTGG CGAGCGTAGGGTGAGTTTGCAAGAGGGGACCAGACACGGGGGGGGGGTTC CTGGCCAGGTTTCTCTCAACTGCCGCATGCTAGAGCCCGACACACGCGTG CCGTAGATGCCATGGCCCTCCCAACAAGCAACCATCGCTGCTGCTGCTGC TGCCGTCGTCTGTGTGTGGGGTGTTGTTCGGCGCCTGCACCCCGCCCTGC CCTCCCCGGAGAGAAGGCTTCGAGAGGCGGTGAGCAAGCTTAGTCAAAAC ACCGCCGCCCAGGTGGAGGAGATGGCCACGCTCAAGGCCAACAACAAGGA CATCAAGTGGCAGGTGGGCGTGCGCGCGTGTTGGTGTCGTTTTGTTGTTG TTGCAGGAGTACCGCACAGCTGCTGGGTGTCGTAAAAAAGCAGGATGTTT GTCCGTCTTCTCTCTCAGCGCTCCTCAGCTCCTCTCTCGACGCCTGGCAG CATAGCTGTTCTTTCCCAATACGTTTTTCTCGATAATAGTTCCGGTTCTA CGGAACTCTCCGGTGCACATTGCAAGCAGGGTACGCTGATGATGGGCACA CCACGCGATGGGCACGCATTGTCATCGATCGACGACGTGTGCAGACCCTC TGCTTCCCATCACTCCCTTTTCCCCCCCACGACGCCGTCTATTCTGTCGC TGCCGTACGGTCTCACTCGTTCATCATCTGTCTTTCACACCATTCACGCT ATATTTCCCGTGTGGACGCGTGGGCACTGCTTATGGTGTATTCGACTTTT CTTGGTAGTCATCGCGCCACGCACACTCTCTCTATCTCCCTCTTTCTCGT ATTGTAGTCGATCGATATCATGGATGGATGGGCGCTGTTGCACCTACCTT CTCCTCCCGCCAGTCCTCCACAAAGCCCTATCTACCCTCATCGAGTCACG ATCTATCGGACTCACTTTTTCGTTTGTCTTCAACTGCACACACAGCTGAT TATTTTTCTGCACTCGTTGTCATCGCCGACGTATGCATACACGAATGCGA TGCTTTGATCTCCTCTTGGAAATGTTCCGATTTTTAACCGATAACAAGAA GTCAATCGGTTCTCGTTGTTCGGCGGCGGCGGGAAGCGCCGATGACTCGA AAATCTACCATTGTCATTTAAGGGACAACGGATTGACAAGCAGCGTGTAC GCTGTGTTTTTGTTGCTGATGGCACTCAACTTTCAGTATAAACATTGCCA GACGAACAAGGCGTTGCTGCGTCCGTCCTCGTTCCGGGCTACATGAGGTG TGATACGGTAGACATAGTCATGATGGCGACGGCGCGGCAAGCGCCCATAG AATTGATAGTGATCTCTTCCAACTGTAGATACATGTCTAGATGCGAACGC CCGGCCTATTCCTGGTCCTCAGATTAAGTTTGTTCTCCATTCAACACAAC GCAGCACAGCAGTGGTAAGTGCATTTTTCACCTGCTGCTTGACCTCGGCA CTCTATGTTGACTTTACCCTTGGACTCGCCCAATTTCGGCGGTGGAGCGA AAGTGCCGAGAACCTTGTAACACTATCGAAACAGCCAACGTTGATGAGCG TTGGAAATCAAGCGTCCGAGTCCAATCTATTCCTCTCTTGTGTGTGCGTG TTTTTCTTGTTAGCATCGACCGCGCTAACCGGCTGACCAATGAAAAGACG TCAGTCCCAGTGCGGTTGAAGACACAAAACACTTGTAAATTCGTGTGTGA TTTCTTATCTGCATCGACCGCGCTAACCGGCTGACCAATGAAAAGGACCT CAGTCTCAGTGCGGCTGAAACACAAGATGTGTGTGTGTGCTTGTTTTTGC TGATTTCTGATTTCCTGATTTCCTGATTTACAGATTTACAGATTTCCGTA TGTCCCGATGTCCGGATTTCCTGATTTCCTGATTTCCCAGATTTCCTAAT TCCCTAATTTCCTGACTTCCTAACTTCCTGATTTACTGATTTCCTGATAT TCGGTTTCGGACACAAGACCACGACGGCCCAAGACCTGCTCAAGTACGAC GAGGCCGGCCAAGGGGAACAGCGGGAGGAAGGGGAGGATGATGGAGGCGG CCTGGACAACGGCAGGGACACTCTGGACGCGGACTTGGTCGAAATTCGGA AGAGGATAAGGGAAAACGTGAGGAGGCTCCAAAATGCACGCCATCCCCGT CTTGACCGTCCGATTACCTCCTGCAGTAAAAACATGCCCTACTTTGAAGT ATTGCATTTTGTTCGATGTTCACGACAAGTAAGCACTCACTTGGTGTTTG GCTGTTGTTGAACGCACACAGGGCGGGTGACGATTTGAATGGCGATCCGA GTCGCGGTTTATATGTTTGTTGTTGTTGTTTTCAAGCTTTCATCAGGAGC ATGTTGTGGGCAGCGTCACGTATCACAGCTTGTTGCTGCACGGCTTTTAT TTTTTCTTTCGAGCACAACCAGCCGTTTCGCATGCATGCACTAGGTCTAC GGTTCGCGCTTTTGGCGGAAGCAAGTCTACAGGGAGAACGCAACGCACGG GCAGCAGTTTTCGTCTCGAACGAGGCGTGGTTTTTCGGGTTGCTGGTGCT GGTGCTGGGTTGTGGATGCAGTAGTACTTCGGCGCTGCTGTTGTACAGTG CTGTTCACTCCTCGCCTTGCCTCTTCTTTTTGCCTGCCCTCTCCCGGTCC CCGTTCCACTCCTTCGCCTAACCCTCCCCCCTCAATGGTCTAACCACTCA AGGCATGCCAAACAAGAAAGTTCGCACCCCGCCAGTCAGCAATCTCTGAT GTAAAAAAAGCTTTTAAAGCATAAACTTAAACTCGTGGTTAGGGGTGAAA TGCCAATCGAATTCGGAGCTAGCTAGTTCTCCCCGAAACTATTGGAATAT TCGGGAAAAAAATTGGGATGACACAAATTTTTGATAAAAATGGTTTAGCT TTACCAGTTGCTGTTGTGAGTGTCGGACCTTGTTTTATCACGCAACTTAA AACAGTCTCTGATTTTTTTCGATGCAAACATTTCCAGAGGAGTAAGATCG AAGCAGCCAAGTCCGACCTCAACGCGACGCTCAAGAGCCGTCGGGAGCGC GGGCCCGACGTCGCCATCAACCCCGCTGCCAACGGCCGCAGCGCCAACGG CCAATCAGCGACGAGGACGCCCCAGGGGCCTCCGTCCCGGTACGCCGCCG CCGTAACTCCGGCGTCATCGCGGCGGGAAGCGGCGTCCCCGCTGCCAGGG TCGGCGAGGTCAAGGGCCGGCGGTGGCGGCGGCGGCGGGCATGTTCGCGG GGGAGCGATTCACGGCGTTTTGCCCCGGACACGGCGTGGCGCTAGGAGCG GCGGCGGCGGTGGCGCTACCGAAGCAGCGCCTGTGCCGGTGTGTGACCCC TGGGACTATTTTTGTCCTTGTGCAACCCGCTGTTTGGGTGTTGGCTGCGG TGCCCCCTTGAGTAGCTCACGTTGTTGTAAAGGGTTATTACATGCCGGTT GTTATGTACTATTCGTTGTCTTGGTTCTCAGCAGAAACTGAAGAAGAAGG AACCTTCCGAGACCTCTTCGGATGCCAAATTCCAGCTTGTGCGTCTGGTA GTACGAAGCGTTGGGGCTTTTTCGTGTTCTTTGCTTTCTCCGTACCTCTC TCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCCCTCTCTCTGTC TCTCTCTCTCTCTCTCTCTCCCTCTCTCTTTCACCTGTTTTTGTAGAGGA CGTTCCGATGACCACCTCCGTGGCGTACATTGACAAGTGCGTACATGATT ACCCCAACGCACCCCGTCGGTTTCCCTTCCGCGCTGGCCCCGGCACACTT CAGTTACTTCTATCGCCTCACGTGGATGTCCACCCTTGTCACATTCTCCA TCCGTTCCTCCCTCCTGTCTTCCTTTTTCTGTATTGTCGACCACCGGTAC CTACCGCCACATACTTCCGCTGCCGGCGAACCTTCTTGCTTCACAGGGAT CCGCCGGCTCCTCTTCCTCGTTCGCTACCCCGGAGCGTGGCGTAGCCCCG CCGAGCGCCGCCTCCCAACGGAGACGCTCCCTCGGCGTAGGCGGCGGCAC CCCGTCCGCGTCGGTGCCTTCCCCCGCTCCCGGCTCCACGGCGAGCAGTC GGGCATCCCGCCGGCGCGTGAGCGTCGCCGGCGGTAGTAACGGCGGGGGT GGGACGGTGCCCGGCGGCGGTGAGAGCGGGGAGTTGGTGGTGGCGATGGC GGCGGCTGAGCGGCCGGGGCTTCGGCTCATGCGGATCGTCGGGTCGCAGT ACGACGCCACGGATGGCGTGGAGGCCATGGTGGCTAAGGCAGAAGCCAAG GTCAAGGTGAGAGAGGCGGCGGTATCGATGCACCGAGAGTTTTTTTTTTT CGAGTCAAGGTGCTCGATGTCTTGTTGGTTCTGTATCCACAGGGGGGGGT TGGTGGGTGGGTTCGAGGTGCTCTTCCGCTGGTGCCTCGAAGGTTGAGGA CAAGAGCGCAGTGCAAGGCAAGCGTTGGGACTAACTTTCAGACTCCTTTT CGTCGCTATTGAGCGGTGGTATGGGACTTTCATCGGCGTATACAAGTTCG GGTTGATGGCGAGCAAAGCAGGGGCGGGCTTTGGTTGTGTGTACCGTTTG TTTTTGTCTCTTGTGGCTCTAGGGAATTCCCCAACCCACCGCTTGGATTG ACAGGAAGTAGGTGTTGTGTTCATTTACTCGAGAGATCCTCCGCTTGACT CATGGTGACGTGTAGAAGCATCATTGTACCTTCCACTTTTCCAATGTTCG ATTTTCTCTCCCTTCTCTATTCTACCGGGTACTCCTTTCACGTGGTCAAC GTATACAGCCTTCGCCGGCTTTTTCTGTTTTCATTCGATGCTTGATTCTC TCTTCCTTTTTTTTTTTCGTCGACTCTGCACACTCTTTACACTCCCGCGA ACACGCGCAGCAACTCGAGAGCGCGGCGGTGACGATGGCGGCAACAACGG CGGCGGCGGCAGCGGCGGCATCCAAGTCTGGCCGTGCCGGGCGGATCACG TTGTCATCATCATCGGCGTCGCCAGGAGAACGATCAGAAGGGGCGCTAGG CTCGTCGTCGACCTCGGCGATGATTGCCGTCGGTGGTAAGGAACGGGAAG ACGCCCTGGCCCGGGGACGGCGGCTCCGGCGAGAGCGGGAGGGGTTGGCG CTCCTGGCGAAGGAGACGGCGAGGCTCTCGTTCTCCTTCCCCATTCGTGA GGTACGTGTCTGTTGTTGTTGTTGTGTGGTTGTTGCGGTTGTTGCGGGAG GTAAATAGGAGTGTGTGCGTCTTTGTGTGTGTGATTTTTGTATGTTTGGT GTTGTGGAGGGCGCTTCCGTGTGCAGCAATACCGGCAGGCGGATGGATCC GGGCGAGTCTTTTGCGGGCTGTGGGTCGGTCGTGCGTACACCGTGCCGGT GCGACTCGATAGGAGCCAGCGGTGCTTTCGTTTCGACCCGCCTCCGTGTG TGCGTGCGTCGGTTATTTGAGTAAAGTGGTTCGTGCATCTTTGCCCACGG CTTTTGTTGTTGTCCACATTACCGCGCCAAAGGCAACCCAGTGCGTCGGG CACACGACATGCTAGTGCTGTTTGTCGTTTTCTACGAACGGTAATTTTCA TTCCTTCGGCGCAGCATGGAATTTCTCCTGGACCAGTGTAGGTTGAGGGG TGGAGCGTTCGCTACACCACAACGCACACGTCCTTCGGCGCGGCGACATT TTGGTTTGTTTTGTTTCTGTCCCCGGGCAACAAATGGCACAACGGCAATG GCACGATGTCAAGCGCCCCCTCCGTGATTGGTCACTCTGTTGTTGCTGTC TTTCGTCGTGACCTCACGGTGTTGTGAACCTGCAAAACAATGTTGTCTGG GTGTGTCATCCAGGTCGGCAGGACGGTGACCCAGGATGAGCTTGCCGAGA AGTTGGGCAACAAGCCGAGCACCATCGCCACGCCGCAGCAGCAGCAGAGG ACGCCTTCGCGCCTAGTCACGTCCGGGCGAGGGCCGGGGTCAGTCCACCA GCCGTCGTCAGCTTCCTCCAGGTATGAGATCTCCTTTCCCACCAACTCGC TCACGACATCGGGATACATTGAGACTCCCGACTTGCAACTCCACACTTCA TTTTCGTGCCATGCCGAATGAGTCAGTATTTTACCGGAGCGACACACCGG ATTCTTTCCTCTTCGCTCCGTGGAATCCACACTCTGCGACACGCGCATCA CGCCCCGCCCCGCGCCTGCGTTGTTTTTTTTTCGCTTTCACGTCGGATAG GAGGGATCTGGTCTCCGCGTCGCCGTCCATGGGTGCGGCGGGCGCGGCGG CGGCGGCCAAGATCAGCGGCGCCGGCAGCGCCACCGCCGCGGCCACGCCC TCACGTGGCTTCGGCGGCGTGTTTTCGTCGCTGAAGCCGGCAGCCACGGC CGCCGCTTCGGCAGCAACGGCTCCGTCCGGCGCCACCACCACCACCACCA CCACCGGCGGGGGACAAATGACGAGGACGATGTCGGTCCGGGATGCCGGG TTGAGCCCAGGAGCGGGCGTCCGGCGAGAGAGATCGGGGGGGTTCGCCGC CCGCACCAGCGGCGGCGAAACTAAGCGGACTTCCCCCGCGACGTTCGCCT TCGGCTCGGCCGCAGCCGCTCCAGCGGCGGCGACGGCGGCAGCGGCGTCT TCGAAGCCGGCAACGGTGGCGACGCCTTCGGCGCTGCTGTTCGACTCAGG CGCCGCCGGCGCCCCGGCGAAGAAGGCGGCCCCTGGTGCTCAGGACAAAA AACCTGCGCCCCCGCCAGCAGCCGCCGCCGCCAGCGCCACGAAGAGCAGC AGCAGTAGCTACCCGCCGATGGCCGCGACGGCGCCGAGCGTCTTCGGGGG CGCCAAGAAAACACCGACTCCTGCTGCTGCTCCTGCGGCTCCCGCGACGG CTCCCGTCCCTGCCGCTGCTGCTCCTGCTGCTGCTGCGAAGCCAGCAAAA CCTGCGGGAGGAACCTCAAGCTTCCCCCCCATGGCTAGCGTAGCGCCGAG CGTT
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig751:876..11379+

>mRNA_Ecto-sp13_S_contig751.18699.1 ID=mRNA_Ecto-sp13_S_contig751.18699.1|Name=mRNA_Ecto-sp13_S_contig751.18699.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=5238bp|location=Sequence derived from alignment at Ecto-sp13_S_contig751:876..11379+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCCCCCCGCCCCAACTCTCGTCCCAGCGAAGAGCCCGGTGTTCGGCAG
CGGCGGCGCCGGCTCGCTCGTTTTCGGGTCCGGATCTCTCGTAGACCCCA
CCTCCGCTGAGAAGAAGGGGGCCGGAGGAGGGGCCGCGAAAGCCCTCGGG
TTCGGGGGTGGGTTCGGTGCGAAGCCGGCGTTTGGCGCTGGTTCTTCCTC
TCCGTTCGGATCGTTCATGTCGCCGCCCGCGGCAGGCGCGAAGGCGCAGG
CGACGGCCGGTTTCGGCAGCTTCGCGTCGTCGACGGCTCCCACCGGAGGC
GGGTTCGGATCGCTTAGTAAAGGGGCCGGTCTGTTCGGCAGCGCGAGCAG
CGGCGACGCTCCTGCTCCTGCTGGGGGGGCGGAGAAAAAGACCGCGGCGG
CACCGGCCGCGGCGGCACCGGCGTCTACTTATCCCCCCATGAGCGCCAAG
GCTCCTTCCACCTTCGGAGAAGCGGCGAAGAAGAAGAACCCGCCGACGGC
GGCAGCAGCCCCGGGGTACCCGCCCATGAGCGCCAAGGCGCCCGGGGTGT
TTGGCGCGCCTGCCCCCGCTCCTGCCGCAGCTTCTGCCAAGAAGCCCGCT
GCAACAGCCCCAGGGTACCCGCCTATGAGCGCCAAGGCGCCCGGGGTATT
TGGCGCTCCTGCTCCTGCTCCCGCTCCTGCCACCGCTGCTGCCAAGAAGC
CGGCCGCAGCAGCTCCGGGGTACCCGCCCATGAGCAGCAAGGCGCCGACC
ACTTTCGGGGCGACGCCGGCGGCAGCCCCTGCCACGGCGAAGAGTAAGCA
ACTCGCCGCAGCAACGCCGGCCCCCGGCTACCCGCCCATGAGCTCCGCGG
CTCCCTCGGTGTTCGGGACGGCGAAGGCGCCCGCGAAAGCGCCCGCGGAG
GCACCGGCGTCGTCGCCGGCGTACCCACCCATGAGCGCCACCGCGCCGTC
GGTGTTCGGCGCGGGTGCCGCCAAGGATTCCGCCACAGGAAGCGGCGGTG
CCGCCGCCAAGCCGCTGGCGTTCGGAGGGGCCGCCGCTGCCCCTGCCACT
CCTGCTGCGACGGGCGGCGGGTTCTCGTTTGGGTCGCCGAAGGGGACGGT
CGCCGGGGCGCCGCCGAGCGCGGGGTTTTCCTTCGGGTCCCCGCAGGCGA
AGGCTAAGCAGCCGGCGCTCTCGTTTGCGGCGCCAACGGCGTCATCAGCC
GGCGCCCCGGCCCCGGCGGTGGCGGCCTCTTCAGGGTTTTCTTTCGGGGT
GGGGGCACCGCCGCCGCCGAAGGCCTCCGGGGCGTTTTCGTTTGGGTCGC
CGAAAGGAGCGAGCTCGAAGGCGTCGACGGGTTCGACGGGGTTCTCGTTT
GGTTCCCCCAAGGCGAAGCCTAAAGCGCCGCCGGCATCCCCTGCTGTCGC
CGCGGACGCCAAGAAGCCGTCGCCGTCATCGTCGTCGTCGTCTGCATATC
CGCCCATGAGCAGTACCGCTCCCTCCGTGTTTGGAGCAACATCTAAGCCG
GCGGCCAAACCGGCCGCGCCGGCGAAGCCGTCGGCAGCAACAGCCTCTGG
AAGTGGTGGTGGTGGCGGAGCATATCCGCCCATGAGCGTCGCGGCCCCGT
CGGTATTTGGAGCGCCGGCGGCCGCCGCAAAGCCGGCGGGGGCGACGCCG
GCCGTGGCTCCGGCGAAGTCGGCGACACCGGCGCAGGTCGCGTTCAAGAA
AGGCACCGCCGCTACTTCCTCTCCATACCCACCAATGAGCAAGACTGCAC
CGGCGGTTTTTGGATCTTCTGCTGCTCCTGCTGCTTCTGCAGCAGCAGCA
CCGAAGAAAACCGCCGGCGGGGGCGGAGGCGGGGGCGCCTACCCGCCGAT
GAGCGCGAAGGCTCCAGCGGTGTTCGGGTCCGCGAAACCGCAGCCCACCG
CCGCTGTTGCGAAAGCCGTTCCCGCACCGTCTAGCTTGAAGCCTTCTTCT
CCCCCTCCCCCCTCGTCGTCGGCGTCGGCGTACCCGCCCATGAGCACGAA
AGCGCCCGCCGTTTTCGGCGGCGGCAGCACCACCGCCGCCGCCGCCACCG
CCGCCGCGCCAGCGCCAACCAAACCCACGACCACCGCGAAGCCCGCCTCG
TCGGGCGGGTACCCCCCCATGAGCACGACGGCGCCTTCGGTGTTCCGAGC
GCCTGCAGTCGCGGCAACGGCGGCGGCGACGGCGGCGGCGACGGCTCCCC
AGGCCAAGACGTCGGCTCCGGGGCTGTTCGGCACTGGGAGTAGTAACCCG
TTCGGCGGCGCGAAGCCGGCCGCCAGCATCTTTGCTTCGACGTCCGGGGC
AAAGTCTTCCACGACGTTCGGGGGGACATCGAAGCCGACGTTTGGCGGTA
GCGGCGCGGGTGGCGGCTTTGCGGGCTCGTTGAGCTTCGGGCAGCCGCAG
CAGCAGCCTTCGCAGCAGCCTTCGCAGCAGCCTTCGCAGCAGCCTTCGCA
GCAGCAGCAACAGCAGAAGAACAATACGTCTGCGGCTACCCCGGCCGCCG
CCGCCACTGCTGCTATCCCGCCTGCCAAGGGCGCGGCGGGTGGTACAGGA
GCGCGTCACGCGTCGTCGTCGGGCGGCCTCTTCGGCGGTGCGTCGTTGGC
AGCAGCGGCGTCCGTTCCCCTGCCGACCGAAACGAAGGCGGCGGCGCCGG
TGGACGTCCGCTCCGCTGCTTCGGTGTTGCCGGCGGCAGCGGCGGCGTTG
GCGCGGGTCGGAGGGGACCGCAGAGGGAGGGGCAAGAACGAATCGAAGGA
ATGGGAGCAGGACTTCGGGGGCGGGGACGACGACGACGACGACGACGAAG
AAGAGGAGTTCGGGGTGCCCGAGATCCCAGTGATAAGGTCGCCGCGCCGG
CCGCAGCCGGCGGGAGGACGGGAAGGCGGCGGTGTCGCCGCGCCAGCGGT
GCGAAGAGCGGTTCCGTGTACGGCGGCGGAGGGCATCGCGTGGAAGAACG
TTCTGGAGGTTCTGGGGCATCTTCGGGACCTGCGGGAGCAAGGCGAGGCG
GGGCTGCTGCGAGACCCGGCGTGGAGGGACGGCATGGAGAGGGGTATGAG
CGGGTTGCGGGACACCGTCGGCAGAAGGCTTCGAGAGGCGGTGAGCAAGC
TTAGTCAAAACACCGCCGCCCAGGTGGAGGAGATGGCCACGCTCAAGGCC
AACAACAAGGACATCAAGTGGCAGACCACGACGGCCCAAGACCTGCTCAA
GTACGACGAGGCCGGCCAAGGGGAACAGCGGGAGGAAGGGGAGGATGATG
GAGGCGGCCTGGACAACGGCAGGGACACTCTGGACGCGGACTTGGTCGAA
ATTCGGAAGAGGATAAGGGAAAACAGGAGTAAGATCGAAGCAGCCAAGTC
CGACCTCAACGCGACGCTCAAGAGCCGTCGGGAGCGCGGGCCCGACGTCG
CCATCAACCCCGCTGCCAACGGCCGCAGCGCCAACGGCCAATCAGCGACG
AGGACGCCCCAGGGGCCTCCGTCCCGGTACGCCGCCGCCGTAACTCCGGC
GTCATCGCGGCGGGAAGCGGCGTCCCCGCTGCCAGGGTCGGCGAGGTCAA
GGGCCGGCGGTGGCGGCGGCGGCGGGCATGTTCGCGGGGGAGCGATTCAC
GGCGTTTTGCCCCGGACACGGCGTGGCGCTAGGAGCGGCGGCGGCGGTGG
CGCTACCGAAGCAGCGCCTGTGCCGGGATCCGCCGGCTCCTCTTCCTCGT
TCGCTACCCCGGAGCGTGGCGTAGCCCCGCCGAGCGCCGCCTCCCAACGG
AGACGCTCCCTCGGCGTAGGCGGCGGCACCCCGTCCGCGTCGGTGCCTTC
CCCCGCTCCCGGCTCCACGGCGAGCAGTCGGGCATCCCGCCGGCGCGTGA
GCGTCGCCGGCGGTAGTAACGGCGGGGGTGGGACGGTGCCCGGCGGCGGT
GAGAGCGGGGAGTTGGTGGTGGCGATGGCGGCGGCTGAGCGGCCGGGGCT
TCGGCTCATGCGGATCGTCGGGTCGCAGTACGACGCCACGGATGGCGTGG
AGGCCATGGTGGCTAAGGCAGAAGCCAAGGTCAAGCAACTCGAGAGCGCG
GCGGTGACGATGGCGGCAACAACGGCGGCGGCGGCAGCGGCGGCATCCAA
GTCTGGCCGTGCCGGGCGGATCACGTTGTCATCATCATCGGCGTCGCCAG
GAGAACGATCAGAAGGGGCGCTAGGCTCGTCGTCGACCTCGGCGATGATT
GCCGTCGGTGGTAAGGAACGGGAAGACGCCCTGGCCCGGGGACGGCGGCT
CCGGCGAGAGCGGGAGGGGTTGGCGCTCCTGGCGAAGGAGACGGCGAGGC
TCTCGTTCTCCTTCCCCATTCGTGAGGTCGGCAGGACGGTGACCCAGGAT
GAGCTTGCCGAGAAGTTGGGCAACAAGCCGAGCACCATCGCCACGCCGCA
GCAGCAGCAGAGGACGCCTTCGCGCCTAGTCACGTCCGGGCGAGGGCCGG
GGTCAGTCCACCAGCCGTCGTCAGCTTCCTCCAGGAGGGATCTGGTCTCC
GCGTCGCCGTCCATGGGTGCGGCGGGCGCGGCGGCGGCGGCCAAGATCAG
CGGCGCCGGCAGCGCCACCGCCGCGGCCACGCCCTCACGTGGCTTCGGCG
GCGTGTTTTCGTCGCTGAAGCCGGCAGCCACGGCCGCCGCTTCGGCAGCA
ACGGCTCCGTCCGGCGCCACCACCACCACCACCACCACCGGCGGGGGACA
AATGACGAGGACGATGTCGGTCCGGGATGCCGGGTTGAGCCCAGGAGCGG
GCGTCCGGCGAGAGAGATCGGGGGGGTTCGCCGCCCGCACCAGCGGCGGC
GAAACTAAGCGGACTTCCCCCGCGACGTTCGCCTTCGGCTCGGCCGCAGC
CGCTCCAGCGGCGGCGACGGCGGCAGCGGCGTCTTCGAAGCCGGCAACGG
TGGCGACGCCTTCGGCGCTGCTGTTCGACTCAGGCGCCGCCGGCGCCCCG
GCGAAGAAGGCGGCCCCTGGTGCTCAGGACAAAAAACCTGCGCCCCCGCC
AGCAGCCGCCGCCGCCAGCGCCACGAAGAGCAGCAGCAGTAGCTACCCGC
CGATGGCCGCGACGGCGCCGAGCGTCTTCGGGGGCGCCAAGAAAACACCG
ACTCCTGCTGCTGCTCCTGCGGCTCCCGCGACGGCTCCCGTCCCTGCCGC
TGCTGCTCCTGCTGCTGCTGCGAAGCCAGCAAAACCTGCGGGAGGAACCT
CAAGCTTCCCCCCCATGGCTAGCGTAGCGCCGAGCGTT
back to top