mRNA_Ecto-sp13_S_contig7502.18695.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7502.18695.1
Unique NamemRNA_Ecto-sp13_S_contig7502.18695.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: D8LQV5_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV5_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 2.460e-41
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFGWWVRNVGTVPIQRRSDHG 201
            EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFGWWVRNVGTVPIQRRSDHG
Sbjct:   39 EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFGWWVRNVGTVPIQRRSDHG 105          
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: A0A4P9Y7P6_9FUNG (PlsC domain-containing protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y7P6_9FUNG)

HSP 1 Score: 93.2 bits (230), Expect = 1.210e-20
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 1
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPR---MVRLTAKDNLWKDPIFGWWVRNVGTVPIQRRSDH 198
            E +PP G  +ILCPNH NSLTD + +V+  PR   MVR+TAKD LW   +FGW++R+VGTVP+QRR DH
Sbjct:   43 ENLPPDGVPSILCPNHSNSLTDGVLMVTSAPRQRAMVRMTAKDTLWDHWVFGWFIRSVGTVPLQRRQDH 111          
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: A0A2R5GMB5_9STRA (Glycerol-3-phosphate O-acyltransferase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMB5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.390e-16
Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFGWWVRNVGTVPIQRRSDHG 201
            E +P +GE T+LC NHGNSLTD++ ++SQ PR++R  AK+ LW  P+ G  ++  G VP+ RR +HG
Sbjct:   34 ENLPAEGEPTLLCFNHGNSLTDSVVLISQTPRVIRFCAKNTLWDMPVVGSLIKGSGAVPVFRRREHG 100          
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: U9UXF9_RHIID (PlsC domain-containing protein n=9 Tax=Glomeraceae TaxID=36751 RepID=U9UXF9_RHIID)

HSP 1 Score: 73.9 bits (180), Expect = 8.020e-14
Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = 1
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPR----MVRLTAKDNLWK-DPIFGWWVRNVGTVPIQRRSDH 198
            E +PP G  TILCPNH NSLTD I ++S  P     M+R+TAKD  WK + IF   V++VGTVPI+R  D+
Sbjct:   29 ENIPPDGCPTILCPNHSNSLTDPILLLSVVPPEKRDMIRMTAKDTFWKKNDIFSLLVKSVGTVPIKRTKDY 99          
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: A0A397IDT0_9GLOM (PlsC domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IDT0_9GLOM)

HSP 1 Score: 72.8 bits (177), Expect = 2.050e-13
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 1
Query:    1 EAVPPQGECTILCPNHGNSLTDAISVVSQCPR----MVRLTAKDNLWK-DPIFGWWVRNVGTVPIQRRSDH 198
            E +PP G  TILCPNH NSLTD + ++S  P     +VR+TAKD  W+ + +F   +R VGTVPI+R  D+
Sbjct:   29 ENIPPDGCPTILCPNHSNSLTDPVCLLSSIPSKKRDLVRMTAKDTFWRGNDLFSLLIRGVGTVPIKRSKDY 99          
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: K5W1Q6_AGABU (PlsC domain-containing protein n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5W1Q6_AGABU)

HSP 1 Score: 67.8 bits (164), Expect = 1.180e-11
Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 1
Query:    7 VPPQGECTILCPNHGNSLTDAI----SVVSQCPRMVRLTAKDNLWKDPIF-GWWVRNVGTVPIQRRSDH 198
            +P  G   ++CPNHGNSLTDA+    S+ SQ   M+RLTAK   +  P F  W + +VGTVPI+RR D+
Sbjct:   38 IPKTGRPCVVCPNHGNSLTDALILTTSIPSQRRNMLRLTAKATQFGHPTFTSWLIESVGTVPIKRRKDY 106          
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: A0A0C3LCE9_9AGAM (PlsC domain-containing protein n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3LCE9_9AGAM)

HSP 1 Score: 65.1 bits (157), Expect = 1.050e-10
Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 1
Query:    7 VPPQGECTILCPNHGNSLTDAI----SVVSQCPRMVRLTAKDNLWKDPIFG-WWVRNVGTVPIQRRSDHG 201
            +P  GE  I+C NH NSLTDA+    SV S+    +RLTAKD+ +    F  W + N GT+PIQRR +HG
Sbjct:   51 IPKNGEPVIVCSNHVNSLTDALLLVTSVSSKKRNFLRLTAKDSQFGRKTFSSWLIENAGTLPIQRRKEHG 120          
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: A0A0W0F0B1_9AGAR (PlsC domain-containing protein n=2 Tax=Moniliophthora roreri TaxID=221103 RepID=A0A0W0F0B1_9AGAR)

HSP 1 Score: 60.8 bits (146), Expect = 3.270e-9
Identity = 32/70 (45.71%), Postives = 41/70 (58.57%), Query Frame = 1
Query:    7 VPPQGECTILCPNHGNSLTDAISVVSQCP----RMVRLTAKDNLWKDPIF-GWWVRNVGTVPIQRRSDHG 201
            +P  G   I+  NH NSLTDA+ +V+  P     M+RLTAK   +    F  W + + GTVPIQRR DHG
Sbjct:   36 IPENGIPCIVSANHSNSLTDALLLVTSVPSKKRNMLRLTAKSTQFGKKTFTSWLIESAGTVPIQRRKDHG 105          
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: UPI0019068230 (uncharacterized protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019068230)

HSP 1 Score: 60.5 bits (145), Expect = 4.490e-9
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 1
Query:    7 VPPQGECTILCPNHGNSLTDAI----SVVSQCPRMVRLTAKDNLWKDPIFG-WWVRNVGTVPIQRRSDH 198
            +P  G  TI+C NHGNSLTDAI    SV S+    +R+TAK  L+    F  W + +VG+VP++RR D+
Sbjct:   41 IPGNGCPTIICANHGNSLTDAIMIITSVSSKKRNFLRMTAKSTLFGKRTFSSWLIESVGSVPVKRRQDN 109          
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Match: A0A5C3QM97_9AGAR (PlsC domain-containing protein n=1 Tax=Pterula gracilis TaxID=1884261 RepID=A0A5C3QM97_9AGAR)

HSP 1 Score: 58.5 bits (140), Expect = 2.140e-8
Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 1
Query:    7 VPPQGECTILCPNHGNSLTDAISVVSQCPR----MVRLTAKDNLWKDPIF-GWWVRNVGTVPIQRRSD 195
            +P  G   I+  NHGNSLTDA+ +V+  P     M+RLTAK   +  P F  W + + GT+PI+RR D
Sbjct:   40 MPKNGTPCIVSANHGNSLTDALVLVTSVPSKRRGMLRLTAKSTQFGHPTFTSWLIESAGTIPIKRRKD 107          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7502.18695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQV5_ECTSI2.460e-41100.00Acyltransferase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A4P9Y7P6_9FUNG1.210e-2059.42PlsC domain-containing protein n=1 Tax=Piptocephal... [more]
A0A2R5GMB5_9STRA7.390e-1649.25Glycerol-3-phosphate O-acyltransferase 1 n=1 Tax=H... [more]
U9UXF9_RHIID8.020e-1453.52PlsC domain-containing protein n=9 Tax=Glomeraceae... [more]
A0A397IDT0_9GLOM2.050e-1349.30PlsC domain-containing protein n=1 Tax=Diversispor... [more]
K5W1Q6_AGABU1.180e-1149.28PlsC domain-containing protein n=3 Tax=Agaricus bi... [more]
A0A0C3LCE9_9AGAM1.050e-1048.57PlsC domain-containing protein n=1 Tax=Tulasnella ... [more]
A0A0W0F0B1_9AGAR3.270e-945.71PlsC domain-containing protein n=2 Tax=Moniliophth... [more]
UPI00190682304.490e-946.38uncharacterized protein n=1 Tax=Cantharellus anzut... [more]
A0A5C3QM97_9AGAR2.140e-844.12PlsC domain-containing protein n=1 Tax=Pterula gra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7502contigEcto-sp13_S_contig7502:66..1068 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score151.4
Seed ortholog evalue1.5e-34
Seed eggNOG ortholog2880.D8LQV5
Model size201
KEGG rclassRC00004,RC00039,RC00041
KEGG koko:K13507
KEGG ReactionR00851,R09380
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.Phosphate acyltransferases
EggNOG OGs28NCQ@1,2QUY6@2759
EC2.3.1.15,2.3.1.42
Cds size201
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464019.4734335-CDS-Ecto-sp13_S_contig7502:65..1201681464019.4734335-CDS-Ecto-sp13_S_contig7502:65..120Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7502 66..120 -
1681464019.4868457-CDS-Ecto-sp13_S_contig7502:922..10681681464019.4868457-CDS-Ecto-sp13_S_contig7502:922..1068Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7502 923..1068 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7502.18695.1prot_Ecto-sp13_S_contig7502.18695.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7502 66..1068 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7502.18695.1

>prot_Ecto-sp13_S_contig7502.18695.1 ID=prot_Ecto-sp13_S_contig7502.18695.1|Name=mRNA_Ecto-sp13_S_contig7502.18695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp
EAVPPQGECTILCPNHGNSLTDAISVVSQCPRMVRLTAKDNLWKDPIFGW
WVRNVGTVPIQRRSDHG
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mRNA from alignment at Ecto-sp13_S_contig7502:66..1068-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7502.18695.1 ID=mRNA_Ecto-sp13_S_contig7502.18695.1|Name=mRNA_Ecto-sp13_S_contig7502.18695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1003bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7502:66..1068- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGCTGTGCCACCTCAGGGGGAGTGCACGATTCTGTGCCCTAATCACGG CAACAGTCTCACGGACGCCATCTCGGTGGTGAGCCAATGCCCCCGCATGG TCCGGCTCACGGCGAAAGACAACCTTTGGAAGGATCCGATCTTTGGGTGA GTGGAAGGATACGATGTCTTTCGGGTGAGGGCGAGGAAGGATACGATCTA TTTGGTGAGCGAAGGATACGACCCTTTTGTTGAAGGCAAGGGTACGATGT CTTGGGCGAGTGCAAGATCTTTGGGTGAGTGCCATAGACACGATCTTTCG GTGAGAGCAATGGTACGATCTTTTGGGTGAGCGAAGGATACAATGTTTCG GGTGATTGCAAGGATACGATATTTTGAGCGAGTGCAAGGATGCGATCTGT CGGCCGAAGGATGGATACGATCTGTGTGGTGACTACGGAGAAGCGGCGTT TTCTCTGTTGCTGCGAGCGGAATGATTGGCCCAACGTCTGTTTTGTTTTA CTTTTATTTGTTCGTTGCTTGTTGCTTAGTGTGGGCGTTGTTATCGTTGC TGATGGTGTTGGTAGCGTTGTCATAGGTCCTTGGGCGTATCGCCAGAGGT GGATCCCTGCGCGGGTTTTTGGCGGTGGGCAAGGGGTTTGAAGTCGGGAA GGAAAAATCGCTGATTATTTCGACAATCAGCTTGTTCGTTCGCGCTTTTC ATCCCGCTACAGTACAAGGCTGACGTTCCCTTTATTGGTCAGCTGGTTTG CGTGGTCGATGCTAACAATTGGTCAGCCTGCCAGCGCAGTGGTCGATGCT ACAACACACACACTTGACGTCTTGTCATTGGTCAGGGGATAAGCGCGGCC GATGCCAATCAATCAAACACACACACACGAACACCACCCGGTTACTATTG TGGCGCGGTCGATGCCAACTAAGAAGACACACGCGCTCCAACACGCAGGT GGTGGGTGAGGAACGTTGGGACCGTTCCCATCCAGCGCCGGTCGGACCAC GGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7502:66..1068-

>mRNA_Ecto-sp13_S_contig7502.18695.1 ID=mRNA_Ecto-sp13_S_contig7502.18695.1|Name=mRNA_Ecto-sp13_S_contig7502.18695.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=201bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7502:66..1068- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGCTGTGCCACCTCAGGGGGAGTGCACGATTCTGTGCCCTAATCACGG
CAACAGTCTCACGGACGCCATCTCGGTGGTGAGCCAATGCCCCCGCATGG
TCCGGCTCACGGCGAAAGACAACCTTTGGAAGGATCCGATCTTTGGGTGG
TGGGTGAGGAACGTTGGGACCGTTCCCATCCAGCGCCGGTCGGACCACGG
C
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