mRNA_Ecto-sp13_S_contig7500.18694.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: D8LF91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF91_ECTSI) HSP 1 Score: 155 bits (393), Expect = 3.050e-42 Identity = 75/81 (92.59%), Postives = 79/81 (97.53%), Query Frame = 1
Query: 16 VQVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRYCVV 258
++VKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQK+ATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR V+
Sbjct: 365 IEVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRISVM 445
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: A0A6H5JL55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE) HSP 1 Score: 153 bits (387), Expect = 1.970e-41 Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 1
Query: 16 VQVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 246
++VKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVK ACLSCVFDETFVIGLRNLDKDEFEEGVIR
Sbjct: 422 IEVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKAACLSCVFDETFVIGLRNLDKDEFEEGVIR 498
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: D8LF87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI) HSP 1 Score: 119 bits (298), Expect = 2.020e-29 Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 19 QVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRYCVV 258
+V SGDY YVHIIE R+LK EDLQGTSDPVVYVEAFGQK+ATEV + L+ VFDETFVI LRNLD+D+F+EGV R V+
Sbjct: 663 KVISGDYVAYVHIIEVRELKGEDLQGTSDPVVYVEAFGQKFATEVVKDRLNAVFDETFVINLRNLDQDDFKEGVFRISVM 742
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: A0A6H5L7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z1_9PHAE) HSP 1 Score: 119 bits (297), Expect = 2.730e-29 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 19 QVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRYCVV 258
+V SGDY YVHIIE R+LK EDLQGTSDPVVYVEAFGQK+ATEV + L+ VFDETFVI LRN+D+D+F+EGV R V+
Sbjct: 733 KVVSGDYVAYVHIIEVRELKGEDLQGTSDPVVYVEAFGQKFATEVVKDRLNAVFDETFVINLRNMDQDDFKEGVFRISVM 812
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: A0A7S1XRY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRY6_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.120e-23 Identity = 50/81 (61.73%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 16 VQVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRYCVV 258
V++KSGDY VHIIE RDLK EDL+GTSDPVVYVE G+K AT V + VFDE F+I LRN+DK++FEE VI V+
Sbjct: 3 VEIKSGDYQFQVHIIECRDLKGEDLEGTSDPVVYVEVLGKKVATSVISKQNNPVFDERFIINLRNVDKEDFEEAVISVKVL 83
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: A0A812YP87_SYMMI (Myof protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YP87_SYMMI) HSP 1 Score: 100 bits (249), Expect = 1.280e-23 Identity = 44/81 (54.32%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 16 VQVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRYCVV 258
+++KSGDY + V+I+EAR+LK +D+ G SDPVV + AFG+K ++ V+ A L+CVFDE F+ RN+DKD F EGVIR V+
Sbjct: 94 IEIKSGDYQVQVNILEARELKGKDMNGLSDPVVTIHAFGEKQSSSVQRASLNCVFDELFIFNFRNMDKDVFSEGVIRVEVM 174
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: A0A7S3HPR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPR4_9STRA) HSP 1 Score: 100 bits (250), Expect = 5.940e-23 Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 16 VQVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 246
+++K GDY + VHIIEAR+LKAE+L GTSDPVVYVE FGQK T ++ SCV+DE F+ ++NLDK+ F +G++R
Sbjct: 406 IEIKDGDYQVQVHIIEARELKAENLDGTSDPVVYVECFGQKQNTICVKSVTSCVYDELFIFNMKNLDKETFADGLLR 482
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: A0A7S2D049_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D049_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.130e-22 Identity = 44/81 (54.32%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 16 VQVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRYCVV 258
+++KSGDY + VHIIE R+LK +DL+GTSDPVV +EAFG+K +T V + C + V+DE F+ RN+DK EFEE +I+ V+
Sbjct: 230 IEIKSGDYQVQVHIIECRELKGKDLEGTSDPVVTIEAFGEKQSTAVMDKCANPVYDELFIFNKRNIDKLEFEEELIKISVM 310
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: A0A7S3JSY6_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSY6_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 5.420e-22 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 16 VQVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRYCV 255
++VKSGDY + V IIEAR+LK ++ GTSDPV +E FG+K + V CLSCVFDETF+I RNLDKD F+E I+ V
Sbjct: 389 IEVKSGDYQVIVDIIEARELKPKNWSGTSDPVCVIECFGEKRTSSVHNDCLSCVFDETFIINKRNLDKDIFKESSIKISV 468
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Match: A0A3M6VD74_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD74_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.010e-21 Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 16 VQVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIRYCVV 258
+++KSGDY + VHIIEARDL +D GTSDPVVYVE FG+K T VK+ LSC +D+ + RNLDK E E G +R V+
Sbjct: 368 IEIKSGDYNVQVHIIEARDLVPKDSTGTSDPVVYVEVFGEKQQTAVKKQVLSCFWDDLLIFPFRNLDKSEVEMGYVRLSVM 448 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7500.18694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7500.18694.1 >prot_Ecto-sp13_S_contig7500.18694.1 ID=prot_Ecto-sp13_S_contig7500.18694.1|Name=mRNA_Ecto-sp13_S_contig7500.18694.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp MPVIVVQVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEback to top mRNA from alignment at Ecto-sp13_S_contig7500:6080..6736+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7500.18694.1 ID=mRNA_Ecto-sp13_S_contig7500.18694.1|Name=mRNA_Ecto-sp13_S_contig7500.18694.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=657bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7500:6080..6736+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7500:6080..6736+ >mRNA_Ecto-sp13_S_contig7500.18694.1 ID=mRNA_Ecto-sp13_S_contig7500.18694.1|Name=mRNA_Ecto-sp13_S_contig7500.18694.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=258bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7500:6080..6736+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |