prot_Ecto-sp13_S_contig7500.18693.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7500.18693.1
Unique Nameprot_Ecto-sp13_S_contig7500.18693.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7500.18693.1 vs. uniprot
Match: A0A6H5JL55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 8.360e-61
Identity = 114/125 (91.20%), Postives = 115/125 (92.00%), Query Frame = 0 
Query:    1 MVRLLHVTIFEGVGVAPHKEPYACAELLDITGRPIKKERVKTKTVTPGSKLVWGEESPRPSSNSRGGXXXXGGRSPVRGTLGSGETKYDEDGAPSSGGVSLTLGRKHDLRNVGALPVLRLSLWGR 125
            MVRLLHVTIFEGVGVAPHKEPYACAELLDITGRPIKKERVKTKTVTPGSKLVWGEESP PSS     XXX GG+SPVRG LGSGETK DEDGAPSS GVSLTLGRKHDLRNVGALPVLRLSLWGR
Sbjct:    1 MVRLLHVTIFEGVGVAPHKEPYACAELLDITGRPIKKERVKTKTVTPGSKLVWGEESPSPSSXXX--XXXGGGQSPVRGALGSGETKRDEDGAPSSRGVSLTLGRKHDLRNVGALPVLRLSLWGR 123
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BLAST of mRNA_Ecto-sp13_S_contig7500.18693.1 vs. uniprot
Match: D8LF91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF91_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 4.680e-59
Identity = 113/125 (90.40%), Postives = 114/125 (91.20%), Query Frame = 0 
Query:    1 MVRLLHVTIFEGVGVAPHKEPYACAELLDITGRPIKKERVKTKTVTPGSKLVWGEESPRPSSNSRGGXXXXGGRSPVRGTLGSGETKYDEDGAPSSGGVSLTLGRKHDLRNVGALPVLRLSLWGR 125
            MVRLLHVTIFEGVGVAPHKEPYACAELLDITGRPIKKERVKTKTVTPGSKLVWGEESP  S      XXXX GRSPVRG LGSGETK +EDGAPSSGGVSLTLGRKHDLRNVGALPVLRLSLWGR
Sbjct:    1 MVRLLHVTIFEGVGVAPHKEPYACAELLDITGRPIKKERVKTKTVTPGSKLVWGEESP--SXXXXXXXXXXXGRSPVRGALGSGETKREEDGAPSSGGVSLTLGRKHDLRNVGALPVLRLSLWGR 123
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7500.18693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JL55_9PHAE8.360e-6191.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF91_ECTSI4.680e-5990.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7500contigEcto-sp13_S_contig7500:2054..2676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7500.18693.1mRNA_Ecto-sp13_S_contig7500.18693.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7500 2046..2676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7500.18693.1 ID=prot_Ecto-sp13_S_contig7500.18693.1|Name=mRNA_Ecto-sp13_S_contig7500.18693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MVRLLHVTIFEGVGVAPHKEPYACAELLDITGRPIKKERVKTKTVTPGSK
LVWGEESPRPSSNSRGGGGSGGGRSPVRGTLGSGETKYDEDGAPSSGGVS
LTLGRKHDLRNVGALPVLRLSLWGR
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