mRNA_Ecto-sp13_S_contig750.18690.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: D7FPS0_ECTSI (Myosin heavy chain, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS0_ECTSI) HSP 1 Score: 201 bits (510), Expect = 1.530e-61 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1
Query: 58 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEIL 375
MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEIL
Sbjct: 1 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEIL 106
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: A0A7S2XXS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXS8_9STRA) HSP 1 Score: 188 bits (477), Expect = 3.880e-56 Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 1
Query: 109 LNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILEDDRNWLAKQLKACKKQDKVLRAELEL 456
LN KIS VL+KQE DFLAAYRAHMY VQKELQ LRQR ++AEN LQKNDK+QKLE+EC+WYRKEALRLDSFNTAMKKDLKYMK KLEILEDDRNWLA+QLKA KKQ+K+LRAELEL
Sbjct: 4 LNDKISGVLSKQESDFLAAYRAHMYNVQKELQALRQRAVDAENALQKNDKIQKLEEECEWYRKEALRLDSFNTAMKKDLKYMKEKLEILEDDRNWLARQLKASKKQNKLLRAELEL 119
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: A0A225W5V9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5V9_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.110e-50 Identity = 120/288 (41.67%), Postives = 172/288 (59.72%), Query Frame = 1
Query: 31 VRALPEPEAMTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILEDDRNWLAKQLKACKKQDKVLRAELELRVEAEQDHRRVVSGELSGSCTSIAENGHSQPVLSGVMGSLERVRRTHHSMSSPGFLVSAQAE---RHHLRTAPDRQARDRALSQEDALAKKVRTLEKSLLKQQRETMRV----RATRARDAVERSEMEEFFMQCVEDVRRKIEQRK 873
+ + E AM VRE+H++L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++KLEDE DWYRKEALRLD+F T M KDLKYMK LE +E+DRNWL KQLKACKKQ+K+LRAEL++R+ ++ +++G P S ++ + S +P + A +L Q+ A +E+ L K++RTL++ L + E + R R +S +E FF+QCV+ V+ ++ QR+
Sbjct: 33 ILVIDEAPAMAMVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKLEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAIEEDRNWLEKQLKACKKQNKLLRAELDVRLSVPGNN---------------SDSGGVFPTFDSQSRSASKILKYRASQGNPTVAPTMGAHCLPLLNLELTSTGQSAMLAEEREEKLKKQIRTLKRELQHKSDELTSIKRQQRLLRRDGGTGQSLLENFFLQCVDSVKEEVSQRR 305
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: A0A662X445_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X445_9STRA) HSP 1 Score: 180 bits (457), Expect = 4.530e-49 Identity = 123/283 (43.46%), Postives = 169/283 (59.72%), Query Frame = 1
Query: 37 ALPEPEAMTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILEDDRNWLAKQLKACKKQDKVLRAELELRVEAEQDHRRVVSGELSGSCTSIAENGHSQPVLSGVMGSLERVRRTHHSMSSPGFLVSAQAERHHLRTAPDRQARDRALSQEDALAKKVRTLEKSLLKQQRETM----RVRATRARDAVERSEMEEFFMQCVEDVRRKIEQRK 873
A+ EP AM VRE+H++L VV SL++KIS VLA+QE DFLAAYRAHMYTVQKEL +R+++ E V K +K++K+EDE DWYRKEALRLD+F T M KDLKYMK LE +E+DRNWL KQLKACKKQ+K+LRAEL++R+ ++ S + S + G S GS + T + + G P A +R E+ K++R L++ L ++ E + R R RS++E FF+QCVE V+ + +R+
Sbjct: 38 AVEEPSAMALVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYTVQKELHEMREKIHRNETVENKTEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAIEEDRNWLEKQLKACKKQNKLLRAELDVRLSGPGNNAGSDSCGVLPPFDSQGKAGASGARQMKPRGSQDAT--TSSAAAGTGLNGLPHLNLETASMGPTMLAEER----EEKFKKQLRNLKRELQQKAHELAVMKKQQRLFRRDGDSGRSQLESFFLQCVEAVKEDVSRRR 314
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: A0A833T8Y6_PHYIN (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T8Y6_PHYIN) HSP 1 Score: 172 bits (435), Expect = 3.100e-46 Identity = 117/285 (41.05%), Postives = 170/285 (59.65%), Query Frame = 1
Query: 37 ALPEPEAMTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILEDDRNWLAKQLKACKKQDKVLRAELELRVEAEQDHRRVVSGELSGSCTSIAENGHSQPVLSGVMGSLERV--RRTHHSMSSPGFLVSAQAERHHLRTAPDRQARDRALSQEDALAKKVRTLEKSLLKQQRETMRVRATRA---RDAVE-RSEMEEFFMQCVEDVRRKIEQRK 873
A E AM VR++H++L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+EDE DWYRKEALRLD+F T M KDLKYMK LE +E+DRNWL QLKACKKQ+K+LRAEL++R+ +S P +G++ S +R + H S F +A H + + +E+ K++RTL++ L + E + ++ + RD +S +E+FF+QCV+ V+ + +R+
Sbjct: 38 AADETPAMAIVRQKHAQLHDVVGSLSEKISSVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLESIEEDRNWLETQLKACKKQNKLLRAELDVRL--------------------AVPGNNSSPDPTGMLPSFDRSGSKILKHRGSQDRFTPAAVGA--HGLPQLNLDVTSPSQEREEKFKKQIRTLKRELQHKTNELISIKRQQRLLKRDGDSGQSLLEKFFLQCVDSVKDDVSRRR 300
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: W2PYB9_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PYB9_PHYPN) HSP 1 Score: 164 bits (414), Expect = 3.510e-43 Identity = 118/288 (40.97%), Postives = 172/288 (59.72%), Query Frame = 1
Query: 40 LPEPEAMTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILEDDRNWLAKQLKACKKQDKVLRAELELRV-----EAEQDHRRVV-SGELSGSCTSIAENGHSQPVLSGVMGSLERVRRTHHSMSSPGFLVSAQAERHHLRTAPDRQARDRALSQEDALAKKVRTLEKSLLKQQRETMRV----RATRARDAVERSEMEEFFMQCVEDVRRKIEQRK 873
+ E AM VR++H++L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+EDE DWYRKEALRLD+F T M KDLKYMK LE L KQLKACKKQ+K+LRAEL++R+ + D RV S + SGS I ++ SQ +L+ T H + V++ T+ +R E+ L K++RTL++ L + E + + R + ++ +S +E+FF+QCV V+ ++ +R+
Sbjct: 39 IDEAPAMAIVRQKHAQLHDVVGSLSEKISSVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEXXXXXXXXLEKQLKACKKQNKLLRAELDVRLAVPGNNSASDSTRVFPSFDRSGS--KILKHRGSQELLT-----------TAHGLPQLNLDVTS--------TSHER---------EEKLKKQIRTLKRELQHKSNELVAIKRQQRLLKRDESTGQSLLEQFFLQCVNSVKEEVSRRR 296
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: A0A6A3F344_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F344_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.900e-43 Identity = 115/278 (41.37%), Postives = 163/278 (58.63%), Query Frame = 1
Query: 40 LPEPEAMTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILEDDRNWLAKQLKACKKQDKVLRAELELRVEAEQDHRRVVSGELSGSCTSIAENGHSQPVLSGVMGSLERVRRTHHSMSSPGFLVSAQAERHHLR---TAPDRQARDRALSQEDALAKKVRTLEKSLLKQQRETMRV----RATRARDAVERSEMEEFFMQCVEDVR 852
+ E AM VRE+H++L VV SL++KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+EDE DWYRKEALRLD+F T M KDLKYMK LE + L KQLKACKKQ+K+LRAEL++R+ ++ SG + +++ +G S + RR ++ HL T+P + A A +E+ L K +RTL++ L ++ E + R R +S +E FF+QCV+ V+
Sbjct: 36 IEEAPAMALVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYNVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTIMTKDLKYMKENLEAIXXXXXXLEKQLKACKKQNKLLRAELDVRLSVPGNNSD--SGGVFPPFDTLSRSG-----------SRSQKRRGSQDITIAATPAVGAHGLPHLNLDVTSPGQSA-TLAEEREEKLKKHLRTLKRELQRKSNELTTIKRQQRMLRRDGGTGQSLLERFFLQCVDSVK 299
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: A0A0P1B663_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B663_PLAHL) HSP 1 Score: 163 bits (413), Expect = 6.740e-43 Identity = 124/291 (42.61%), Postives = 168/291 (57.73%), Query Frame = 1
Query: 40 LPEPEAMTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILEDDRNWLAKQLKACKKQDKVLRAELELRVEAEQDHRRVVSGELSGSCTSIAENGHSQPVLSGVMGSLERVRRTHHSMSSPGFLVSAQAERHHLRTAPDRQARDRALSQEDALAKKVRTLEKSLLKQQRETMRV----RATRARDAVERSEMEEFFMQCVEDVRRKIEQRKLHARMLHTR 900
+ E AM VR++H++L VV SL+ KIS VLA+QE DFLAAYRAHMY VQKEL +R+++ E V K++K++K+EDE DWYR EALRLD+F T M KDLK MK LE +DR WL KQLKACKKQ+KVLRAEL++RV V+G GS G S +G+ RR S+ VS E H L Q A+ E+ L K++R L++ L ++ E + ++ RS +E FF+ CVE V+ ++ +R+ R HT+
Sbjct: 38 IDEIPAMAIVRQKHAQLHEVVGSLSDKISAVLAQQERDFLAAYRAHMYNVQKELYAMREKIHRNETVENKSEKIKKIEDERDWYRNEALRLDAFTTTMTKDLKTMKENLESXXEDRTWLEKQLKACKKQNKVLRAELDVRV--------AVAGTSYGSDN---RGGDSPFDSQRRIGANLPKRRISKDFSTETASVS---EVHGLP-----QLTSDAVRSEEKLKKQIRHLKRELQQKSIELSSIMRQHHLVKSEVRTGRSLLESFFLLCVESVKEEVSRRR--ERRSHTK 307
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: A0A3F2RK62_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RK62_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.240e-42 Identity = 84/132 (63.64%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 58 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEILEDDRNWLAKQLKACKKQDKVLRAELE 453
M VRE+H++L VV SL++KIS VLA+QE DFLAAYRAHMYTVQKEL +R+++ E V K++K++K+EDE DWYRKEALRLD+F T M KDLKYMK LE +E L KQLKACKKQ+K+LRAEL+
Sbjct: 1 MAVVREKHAQLHDVVGSLSEKISAVLARQERDFLAAYRAHMYTVQKELHEMREKIHRNETVENKSEKIKKIEDERDWYRKEALRLDAFTTTMTKDLKYMKENLEAIEXXXXXLEKQLKACKKQNKLLRAELD 132
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Match: A0A835Z8J0_9STRA (Putative myosin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J0_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.290e-42 Identity = 78/106 (73.58%), Postives = 93/106 (87.74%), Query Frame = 1
Query: 58 MTRVREEHSRLQGVVVSLNKKISQVLAKQEGDFLAAYRAHMYTVQKELQTLRQRVIEAENVLQKNDKVQKLEDECDWYRKEALRLDSFNTAMKKDLKYMKGKLEIL 375
M RVREEH+ +Q V+ +LN KIS VL+KQEGDFLAAYRAHMYTVQKELQ+LRQRV++AE LQ+NDKVQ+LED C+WYR+EALRLDSFN+AMKKDLK M K+ +L
Sbjct: 1 MGRVREEHTHIQSVLGTLNSKISAVLSKQEGDFLAAYRAHMYTVQKELQSLRQRVVDAEKALQRNDKVQRLEDACEWYRREALRLDSFNSAMKKDLKRMGDKVAVL 106 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig750.18690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig750.18690.1 >prot_Ecto-sp13_S_contig750.18690.1 ID=prot_Ecto-sp13_S_contig750.18690.1|Name=mRNA_Ecto-sp13_S_contig750.18690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=336bp MGDTFLTEPLVRALPEPEAMTRVREEHSRLQGVVVSLNKKISQVLAKQEGback to top mRNA from alignment at Ecto-sp13_S_contig750:5035..8329- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig750.18690.1 ID=mRNA_Ecto-sp13_S_contig750.18690.1|Name=mRNA_Ecto-sp13_S_contig750.18690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3295bp|location=Sequence derived from alignment at Ecto-sp13_S_contig750:5035..8329- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig750:5035..8329- >mRNA_Ecto-sp13_S_contig750.18690.1 ID=mRNA_Ecto-sp13_S_contig750.18690.1|Name=mRNA_Ecto-sp13_S_contig750.18690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1008bp|location=Sequence derived from alignment at Ecto-sp13_S_contig750:5035..8329- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |