mRNA_Ecto-sp13_S_contig74997.18684.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 155 bits (391), Expect = 9.020e-42 Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPVDVYDRRLTSDGESNPLLVARDLEAMQEDASSPLEEEEHRQLTEDVPKWQAQEKWRNNTV 291
K+GKYGA+CRACYND EKARKQDTPGNRAIMCSTKMPVDVY RRLT+ E NPLLVARDLEA+Q+D EEHRQL+EDVPKW+AQEKW+NNTV
Sbjct: 532 KNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPVDVYGRRLTTADEVNPLLVARDLEALQKD-------EEHRQLSEDVPKWRAQEKWKNNTV 621
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 152 bits (384), Expect = 7.820e-41 Identity = 78/93 (83.87%), Postives = 85/93 (91.40%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPVDVYDRRLTSDGESNPLLVARDLEAMQEDASSPLEEEEHRQLTEDVPKWQAQEKWR 279
KSGKYGA+CRACYNDVEKARKQDTP NRAIMCSTKMPVDVYDRRLT+ ES+PLLVARDLE +Q+DASSP EE HRQLTEDVPKW+ QEKW+
Sbjct: 401 KSGKYGADCRACYNDVEKARKQDTPANRAIMCSTKMPVDVYDRRLTAV-ESDPLLVARDLEVLQKDASSPSVEE-HRQLTEDVPKWKEQEKWK 491
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 141 bits (355), Expect = 6.430e-37 Identity = 68/95 (71.58%), Postives = 79/95 (83.16%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPVDVYDRRLTSDGESNPLLVARDLEAMQEDASSPLEEEEHRQLTEDVPKWQAQEKWRNN 285
K G YG ECRAC+NDV+KARKQDTP NR+IMCSTK PV+ Y RRLT+D ES+PL VARDLE +QEDASSP EEEHRQL+ PKW++QEKWR +
Sbjct: 405 KQGTYGEECRACFNDVDKARKQDTPENRSIMCSTKRPVEGYGRRLTADDESDPLRVARDLETLQEDASSPSGEEEHRQLSGSTPKWKSQEKWRTS 499
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: A0A6H5JHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL7_9PHAE) HSP 1 Score: 128 bits (321), Expect = 2.390e-32 Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPVDVYDRRLTSDGESNPLLVARDLEAMQEDASSPLEEEEHRQLTEDVPKWQAQEKWR 279
K G YG E RAC+NDV+KAR+QDTP NRAIMCSTK PV+ Y RRLT D ES+PL +AR LE +QED SSPL+E+EHRQL+ PK ++QEKWR
Sbjct: 334 KQGTYGEERRACFNDVDKAREQDTPENRAIMCSTKRPVEGYGRRLTPDDESDPLRIARSLETLQEDTSSPLQEQEHRQLSGSTPKRRSQEKWR 426
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 110 bits (276), Expect = 2.950e-26 Identity = 59/100 (59.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPVDVYDRRLTSDGESNPLLVARDLEAMQEDASSPLEE-------EEHRQLTEDVPKWQAQEKWR 279
K G YGA+CR CYN+V++A KQD+P NRAIMCST PVDVY RR+++ ES P VAR LEA+ E+ASSP EE + R+LT VPKW+A EKWR
Sbjct: 416 KQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVKPVDVYRRRMSAADESEPSRVARSLEALNEEASSPSEEVQSAVKVNQDRKLT-SVPKWKANEKWR 514
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE) HSP 1 Score: 102 bits (254), Expect = 2.690e-23 Identity = 58/106 (54.72%), Postives = 72/106 (67.92%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIM------CSTKMPVDVYDRRLTSDGESNPLLVARDLEAMQEDASSPLEE-------EEHRQLTEDVPKWQAQEKWR 279
K G YGA+CR CYN V+KA KQD+P NRAIM CST MPVDVY RR+++ E VAR L A++EDASSP EE ++ R+LT VP+W+A+EKWR
Sbjct: 266 KQGIYGADCRVCYNSVDKALKQDSPDNRAIMYDAVVVCSTVMPVDVYHRRMSAADEGEASRVARRLAALKEDASSPAEEVELAVKVDQDRKLT-SVPRWKAKEKWR 370
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: A0A6H5L131_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 6.380e-15 Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPVDVYDRRLTSDGESNPLLVARDLE 183
K G YG ECRACYND ++A KQDTPGNRAIMCST MPVDV L+ D E L + + +E
Sbjct: 342 KDGAYGTECRACYNDGDEAHKQDTPGNRAIMCSTVMPVDVRSLWLSIDNEDYSLQIGQAME 402
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 2.770e-8 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPV 114
K GKYG CR C+NDV+ A +DTP NRAIMCST +PV
Sbjct: 436 KGGKYGPHCRTCFNDVDTALMRDTPKNRAIMCSTMLPV 473
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: A0A6H5JGJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ2_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 2.430e-7 Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPV 114
K G++G CR C+NDV+ A +DTP NRAIMCST +PV
Sbjct: 238 KGGRFGPHCRTCFNDVDMALMRDTPKNRAIMCSTMLPV 275
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Match: D8LTU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU7_ECTSI) HSP 1 Score: 53.1 bits (126), Expect = 5.110e-6 Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 1
Query: 1 KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPVDV 120
K GKYG+ CR C+ND+ +A K D+P +R IMC T P D+
Sbjct: 79 KDGKYGSNCRYCFNDISRAIKFDSPDDRTIMCDTLQPPDL 118 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig74997.18684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig74997.18684.1 >prot_Ecto-sp13_S_contig74997.18684.1 ID=prot_Ecto-sp13_S_contig74997.18684.1|Name=mRNA_Ecto-sp13_S_contig74997.18684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp KSGKYGAECRACYNDVEKARKQDTPGNRAIMCSTKMPVDVYDRRLTSDGEback to top mRNA from alignment at Ecto-sp13_S_contig74997:26..610+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig74997.18684.1 ID=mRNA_Ecto-sp13_S_contig74997.18684.1|Name=mRNA_Ecto-sp13_S_contig74997.18684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=585bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74997:26..610+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig74997:26..610+ >mRNA_Ecto-sp13_S_contig74997.18684.1 ID=mRNA_Ecto-sp13_S_contig74997.18684.1|Name=mRNA_Ecto-sp13_S_contig74997.18684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=291bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74997:26..610+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |