prot_Ecto-sp13_S_contig7499.18683.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7499.18683.1
Unique Nameprot_Ecto-sp13_S_contig7499.18683.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length269
Homology
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: D7FYA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYA5_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 9.000e-86
Identity = 206/268 (76.87%), Postives = 210/268 (78.36%), Query Frame = 0
Query:    1 MGNLMSRKKKRERDHVTDQDRAVLDLKNSRDRLTRYQKKVRGFLVVDNFSSCLFSANVFSFPNHCLFFVVRLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAPESVPATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVXXXXXXXXXXXXXXXXXXXXLEELLPXXXXXXXXXXXXVTDTAEPQQEEERPMLVPA 268
            MGNLMSRKKKRERDHVTDQDRAVLDLKNSRDRLTRYQKK+          +              L  + +LKQDQADKASSQLLSVHQMMDTIDWETQQLQVF ALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAPE VPATVXXXXXXXXXXXXXXXXXXXXXX        AVXXXXXXXXX           LEELLP     XXXXXXX    AEPQQEEERP LVPA
Sbjct:    1 MGNLMSRKKKRERDHVTDQDRAVLDLKNSRDRLTRYQKKLDLECAKLQAQAAAMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFNALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAPEPVPATVXXXXXXXXXXXXXXXXXXXXXX--------AVXXXXXXXXXSEETAAQGASSLEELLPEAPTEXXXXXXXXXXAAEPQQEEERPTLVPA 260          
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: A0A836CK96_9STRA (Snf7-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK96_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.390e-31
Identity = 72/168 (42.86%), Postives = 104/168 (61.90%), Query Frame = 0
Query:    9 KKRERDHVTDQDRAVLDLKNSRDRLTRYQKKVRGFLVVDNFSSCLFSANVFSFPNHCLFFVVRLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAPESVP 176
            K + R HV+D D+AVLDLK +RDRL RYQKK+ G   +    +              L  + R K +QA KA +QL +V ++++T++WE  Q QV  AL EG  ALN LHE MP++ VE+LMADT E++  E++++  I G+W+  NE++LL E   L+ E A E+ P
Sbjct:   16 KVKNRPHVSDHDKAVLDLKVARDRLKRYQKKLDGEAQMLTTQAQALVKEGRKDRALVLLKIKRFKAEQASKADAQLFTVTELLETVEWEGHQAQVLAALSEGTKALNSLHEAMPIEDVEQLMADTQEALEYEQQVNSIIAGAWSPENEDELLEEFEALQKEMAAEAAP 183          
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: U9TY63_RHIID (Snf7-domain-containing protein n=6 Tax=Rhizophagus TaxID=1129544 RepID=U9TY63_RHIID)

HSP 1 Score: 106 bits (265), Expect = 1.830e-24
Identity = 70/171 (40.94%), Postives = 110/171 (64.33%), Query Frame = 0
Query:    1 MGNLMSRKKKRERDHVTDQDRAVLDLKNSRDRLTRYQKKVRGFLVVDNFSSCLFSANVFSFPNHCLFFVVRLK-QDQA-DKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESE 169
            MGN  SR        +T QDRA+LDLK  RD+L +YQKK++  LV D  +     A + +     L  + + K Q+Q   K+ +QLL++ Q+  TI++   +  VF+ LK+GN+ LN++H+E P++KVE+LM DTA++IA + EIS+A+ G  T  +EE++LAEL ++ +E
Sbjct:    1 MGNKNSR--------ITSQDRAILDLKVQRDKLKQYQKKLQ--LVADRETQIAKEALLKNNKRGALLALKKKKYQEQLLSKSDAQLLNLEQLTQTIEFTLVEKDVFEGLKQGNLILNEIHKETPIEKVEKLMEDTADAIAYQNEISEALSGKLTSEDEEEILAELDQIVNE 161          
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: H3H1K0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1K0_PHYRM)

HSP 1 Score: 106 bits (264), Expect = 5.080e-24
Identity = 68/157 (43.31%), Postives = 100/157 (63.69%), Query Frame = 0
Query:   13 RDHVTDQDRAVLDLKNSRDRLTRYQKK--VRGFLVVDNFSSCLFSANVFSFPNHCLFFVVRLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 167
            R  +T +D+A+LDLKN+RDRL +YQ +  +    + D+ +  L  A         L  + + K+ Q  +A   L+ V  M+DT++WETQQLQVF+ LK GN  LN +H+EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE+E
Sbjct:   28 RAQITSKDKAILDLKNARDRLKKYQARLDIEANQLHDS-AKRLLQAGKRDRAKLALK-LKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMMETEEAQATANEISRVIGGSLTVEDEDAVLSELAEIE 182          
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: A0A1V9ZMW9_9STRA (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZMW9_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.610e-23
Identity = 72/189 (38.10%), Postives = 118/189 (62.43%), Query Frame = 0
Query:    1 MGNLMSRKKKRERD---------------HVTDQDRAVLDLKNSRDRLTRYQKKV-RGFLVVDNFSSCLFSANVFSFPNHCLFFVVRLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAPE 173
            MG L+S+KK+   D                V+D+D+AVL+LK SRDRL +YQK++ +    + N +  L +         CL  + + K  Q ++A + L++VH M+D+++WE+QQLQ+F+ LK GN  L+ +H+EM ++ VE+LM +T E+ A  +EIS+ +GG+ +  +E+ +LAELAE+E+  A E
Sbjct:  658 MGGLLSKKKESPNDVLAARRAANVAKAKNQVSDKDKAVLELKASRDRLKKYQKQLEKDSEALQNKARELIANKHKDRALLCLK-MRKFKLQQLEQADNHLMNVHTMIDSVEWESQQLQIFQGLKAGNAVLDAIHKEMTVEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEAAEAAE 845          
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: A0A4D9D5S7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S7_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.620e-23
Identity = 76/187 (40.64%), Postives = 116/187 (62.03%), Query Frame = 0
Query:    1 MGNLMSR-------KKKRERDHVTDQDRAVLDLKNSRDRLTRYQKKVRGFLV-VDNFSSCLFSANVFSFPNHCLFFVV--RLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEA-APESVP 176
            MG L SR       K  ++   +TD D+AVLDLK ++DRL RYQ K+    + +   +  L +A      +  L  +   RL++D+  KA+ QLL+V Q++  I+WE +QLQVF ALK GN AL  +H+ + L++V++LMADTA+SIA E+EIS+ +  + +   EE++L E  EL++   APE+ P
Sbjct:    1 MGGLFSRHGRHHGGKSPKKPVQITDHDKAVLDLKVAKDRLKRYQMKMHSETMRLTEKAKELVTAGR---KDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQALIEAPENTP 184          
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: A0A5D6XUA9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUA9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.780e-23
Identity = 65/155 (41.94%), Postives = 97/155 (62.58%), Query Frame = 0
Query:   16 VTDQDRAVLDLKNSRDRLTRYQKK--VRGFLVVDNFSSCLFSANVFSFPNHCLFFVVRLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELES 168
            VT +D+A+LDLKN+RDRL +YQ +  V    + ++    L +             V + K+ Q  +A   LL+V +M+DT++WETQQL+VF+ LK GN  LN +H+EM ++ VE LM +T E+     EIS+ IGGS T  +E+ +L ELAE+E+
Sbjct:   32 VTSKDKAILDLKNARDRLRKYQARLDVEAQQLHESAKKLLLAEK--RDRAKLALKVKKFKEQQMKQADEHLLTVLEMLDTVEWETQQLKVFEGLKAGNSLLNAIHQEMSVEAVENLMLETEEAQETANEISRLIGGSLTLEDEDAVLLELAEIEA 184          
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: A0A067CN09_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CN09_SAPPC)

HSP 1 Score: 103 bits (258), Expect = 2.900e-23
Identity = 63/162 (38.89%), Postives = 107/162 (66.05%), Query Frame = 0
Query:   16 VTDQDRAVLDLKNSRDRLTRYQKKVR-GFLVVDNFSSCLFSANVFSFPNHCLFFVVRLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAPESVP 176
            V+ +D+A+L+LK SRDRL +YQK +      +++ +  L +         CL  + + K  Q ++A + LL+VHQM+ +++WE+QQLQ+F+ LK GN  L+ +H+EM ++ VE+LM +T E+ A  +EIS+ +GG+ +  +E+ +LAELAE+E+ A    +P
Sbjct:   31 VSSKDKAMLELKASRDRLKKYQKALEVESATLESKARQLLAKKQKDRAMLCLK-MRKFKLQQIEQADTHLLNVHQMIGSVEWESQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEAAAFEAQLP 191          
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: A0A3M6VKN6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN6_9STRA)

HSP 1 Score: 103 bits (257), Expect = 5.310e-23
Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 0
Query:   13 RDHVTDQDRAVLDLKNSRDRLTRYQKK--VRGFLVVDNFSSCLFSANVFSFPNHCLFFVVRLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 167
            R  +T +D+A LDLKN+RDRL +YQ +  +    + ++    L +             + + K+ Q  +A   L+ V  M+DT++WETQQLQVF+ LK GN  LN +H+EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE+E
Sbjct:   29 RAQITSKDKATLDLKNARDRLKKYQTRLDIEANQLYESAKKLLQAGK--RDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTMEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 183          
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Match: A0A0P1AN92_PLAHL (Hydroxymethylglutaryl-mitochondrial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN92_PLAHL)

HSP 1 Score: 103 bits (256), Expect = 7.110e-23
Identity = 66/157 (42.04%), Postives = 101/157 (64.33%), Query Frame = 0
Query:   13 RDHVTDQDRAVLDLKNSRDRLTRYQKK--VRGFLVVDNFSSCLFSANVFSFPNHCLFFVVRLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 167
            R  +T +D+AVLDLKN+RDRL +YQ +  +    + D+ +  L  A+        L  + + K+ Q  +A   L+ V  M+DT++WETQQLQVF+ LK  N+ LN +H+EM ++ VEELM +TAE+ A   EI + IGG+ +  +E+ +L+ELAE+E
Sbjct:   27 RAQITSKDKAVLDLKNARDRLRKYQARLDIEANQLHDS-AKRLLQADKRDRAKLALK-LKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKASNLILNAIHKEMTVEAVEELMLETAEAQATANEIGRIIGGNLSVEDEDAVLSELAEIE 181          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7499.18683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYA5_ECTSI9.000e-8676.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CK96_9STRA3.390e-3142.86Snf7-domain-containing protein (Fragment) n=1 Tax=... [more]
U9TY63_RHIID1.830e-2440.94Snf7-domain-containing protein n=6 Tax=Rhizophagus... [more]
H3H1K0_PHYRM5.080e-2443.31Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1V9ZMW9_9STRA1.610e-2338.10Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A4D9D5S7_9STRA1.620e-2340.64Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A5D6XUA9_9STRA2.780e-2341.94Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A067CN09_SAPPC2.900e-2338.89Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A3M6VKN6_9STRA5.310e-2341.40Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A0P1AN92_PLAHL7.110e-2342.04Hydroxymethylglutaryl-mitochondrial n=1 Tax=Plasmo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005024Snf7 familyPFAMPF03357Snf7coord: 75..181
e-value: 4.9E-21
score: 75.1
NoneNo IPR availablePANTHERPTHR22761:SF5CHARGED MULTIVESICULAR BODY PROTEIN 6coord: 73..215
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 73..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7499contigEcto-sp13_S_contig7499:2221..7015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7499.18683.1mRNA_Ecto-sp13_S_contig7499.18683.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7499 2221..7015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7499.18683.1 ID=prot_Ecto-sp13_S_contig7499.18683.1|Name=mRNA_Ecto-sp13_S_contig7499.18683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=269bp
MGNLMSRKKKRERDHVTDQDRAVLDLKNSRDRLTRYQKKVRGFLVVDNFS
SCLFSANVFSFPNHCLFFVVRLKQDQADKASSQLLSVHQMMDTIDWETQQ
LQVFKALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGS
WTDANEEDLLAELAELESEAAPESVPATVPEPVPATAPEPVPATASEPVP
ATASEPVPAAVPAAAEASKPSEEPAAQEASSLEELLPEAPTEAPVVVPAV
TDTAEPQQEEERPMLVPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam