prot_Ecto-sp13_S_contig7498.18682.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7498.18682.1
Unique Nameprot_Ecto-sp13_S_contig7498.18682.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
BLAST of mRNA_Ecto-sp13_S_contig7498.18682.1 vs. uniprot
Match: D7FMD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD1_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 9.920e-55
Identity = 244/305 (80.00%), Postives = 245/305 (80.33%), Query Frame = 0
Query:    1 MKWGARSAGFGAG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGGGAVGRGGDGGVDAAAGGAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGLPTMKPPSSAATFSSFGSVNLPVPKPSASSPPSPTTTFGITPLTTSTQAFPSQXXXXXXXXXXXXXXXPASTSGGQLKFGLSPAAAAPGAGPPSFGSAVPTFGRPSAGEKPGDGGGDATKAAAAALAAREKRFAAQASGSXXXXXXXXXXXXXXXXXXXDTDAAXXXXXXXXXXXSRVAGDEDGEVDEEDEGDPV 301
            MKWGARSAG GAG    +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DG GAVGRGGDGGVDAAAGGAK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGLP MKPPSSAATFS FGSVNLPVP PSASSPPSPTT FGITPLTTSTQ FPSQXXXXXXXXXXXXXXX     GGQLKFGLSPAAAAPGA PPSFGSAVPTFG  SAGEKPGDG              REKRFAAQASGSXXXXX            XX     XXXXXXXXXXX        GEVDEEDEGDPV
Sbjct:    1 MKWGARSAGLGAGFSSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSGAVGRGGDGGVDAAAGGAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGLPAMKPPSSAATFSPFGSVNLPVPNPSASSPPSPTTAFGITPLTTSTQGFPSQXXXXXXXXXXXXXXX--XXXGGQLKFGLSPAAAAPGAVPPSFGSAVPTFG--SAGEKPGDGXXXXXXXXXXXXXXREKRFAAQASGSXXXXXEKSAAGTTGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXGEVDEEDEGDPV 301          
BLAST of mRNA_Ecto-sp13_S_contig7498.18682.1 vs. uniprot
Match: A0A6H5KRL3_9PHAE (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRL3_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.210e-28
Identity = 194/343 (56.56%), Postives = 195/343 (56.85%), Query Frame = 0
Query:    1 MKWGARSAGFGAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGGGA---------VGRGGDGGVDAAAGGAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGLPTMKPPSSAATFSSFGSVNLPVPKPSASSPPSPTTTFGITPLTTSTQAFPSQXXXXXXXXXXXXXXXPASTSGGQLKFGLSPAAAAPGAGPPSFGSAVPTFGRPSAGEKPGDGGG---------------------------------DATKAAAAALAAREKRFAAQASGSXXXXXXXXXXXXXXXXXXXDTDAAXXXXXXXXXXXSRVAGDEDGEVDEEDEGDPV 301
            MKWGARSAGFGAGSXXXXXXXXXXXXXXXX      XXXXXXXXXXX               VGR GDGGVD        XXXXX  XXXX             XXXXXX  SSGLPTMKPPSSAATF S                   TTTFGITPLTT TQ FPSQ XXXXXXXXXXXXXX     GGQLKFGLSPAAAAPGA PPSFGSAVPTFGRP A                                          D        LAAREKRFAAQASGS                   DTD  XXXXXXXXXXXSRVAG+EDGEVDEEDEGDPV
Sbjct: 1666 MKWGARSAGFGAGSXXXXXXXXXXXXXXXXSVGTTPXXXXXXXXXXXXXXXXXXXXXXXXXXVGRRGDGGVDXXXXXXXXXXXXXKDXXXXKGGVFGSGKGFAGXXXXXXFGSSGLPTMKPPSSAATFPSXXXXXXXXXXXXXXXXXXXTTTFGITPLTTPTQGFPSQQXXXXXXXXXXXXXX-XXXXGGQLKFGLSPAAAAPGAVPPSFGSAVPTFGRPVASTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXLAAREKRFAAQASGSAGASAEKSAAGITGTAPASDTDXXXXXXXXXXXXXSRVAGEEDGEVDEEDEGDPV 2007          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7498.18682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMD1_ECTSI9.920e-5580.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRL3_9PHAE2.210e-2856.56TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7498contigEcto-sp13_S_contig7498:2046..4987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7498.18682.1mRNA_Ecto-sp13_S_contig7498.18682.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7498 2046..4987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7498.18682.1 ID=prot_Ecto-sp13_S_contig7498.18682.1|Name=mRNA_Ecto-sp13_S_contig7498.18682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MKWGARSAGFGAGSSSSTTPSTTTTTTAAGTAATTPSSASVPAPAPAADG
GGAVGRGGDGGVDAAAGGAKVGGSGEKDGGGGKGGVFGSGKGFAGFGGGG
GFGSSGLPTMKPPSSAATFSSFGSVNLPVPKPSASSPPSPTTTFGITPLT
TSTQAFPSQQQQKPSSSSSLFSSSPASTSGGQLKFGLSPAAAAPGAGPPS
FGSAVPTFGRPSAGEKPGDGGGDATKAAAAALAAREKRFAAQASGSAAAS
AEKSAAGTTGSAPPSDTDAAGDTNASGGVSGSRVAGDEDGEVDEEDEGDP
V*
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