prot_Ecto-sp13_S_contig7497.18681.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7497.18681.1
Unique Nameprot_Ecto-sp13_S_contig7497.18681.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length570
Homology
BLAST of mRNA_Ecto-sp13_S_contig7497.18681.1 vs. uniprot
Match: D8LJU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU7_ECTSI)

HSP 1 Score: 799 bits (2064), Expect = 9.890e-287
Identity = 474/570 (83.16%), Postives = 495/570 (86.84%), Query Frame = 0
Query:    1 MLSSNRLLDLFRSELQNVSPSSIGRAPSHGANNANSSVKQGLPPVTKGRAVYGNVHGTEVVENAVAIAAGGTRPRVETKVERENAHLREQLKFQGAVLDQLAGDVHTLELKA-SVASGGTHLRPLSIHNQETKDLVREGPVGPEGMAQRPKDEVHQENHEAGARCPGICKGGTQGAQIDGEDPHGELPNVDERYITQRQHTADDLAQGHRGNTPPTPVQHERVESARDPREKPDFSIETASDHLLRKVVLVSYSPTGGEQDSGDNNTDLRSELRAARLLTERIRGDFAAAQKAAEEKEQSHIGLLSRERKFRATVEAGLREKVHSMRRRARDREERLSAELSSVKAQLKEAIDLLATKEDEVRXXXXXXXXXXXXXXXALARGKERDRQMSWLERRLQEVSSGETCAATLRLEEMTAALEAQQQELERLRASAREVERHXXXXXXXXXXXXXXTKTIWRETDQKQVGLRRRKESGNLASAARGPSTDDHDDHDHRHETGAANTSSSVDDDTQVANDVNLCDADGNGDDRRLAVSRVVPHHDHKGKHRRRVREDIDNGDVPRVSLDLEALL 569
            M SSNRLLDLFRSE Q+VSPSS+GRAPSHGANNAN+SVKQ LP VTKGRA YGNV G EVVE AVA AAGGTRPRVETK+ERENAHLREQLKFQGAVLDQLAGDVHTLELKA   ASG THLRP  IHNQE  D++REGP    GM+Q  KDEVHQEN EAGARCP +CKGGTQGA IDGEDPHGE+ NVDER   Q Q TADDL QGHRGNTPPTPVQH R ESA DP EKPDF +ETASDH+LRKV+  S SPTGGE DSGDN+TDLRSELRAARLLTERIRGDFAAAQKAAEEKEQSHIGLLSRERKFRATVEAGLREKVHSMR+RARDREERLSAELSSVKAQLKEA+DLLATKE    XXXXXXXXXXXXXXX  ARGKERDRQMSWLERRLQEVSSGET AATLRLEEMTAALEAQQQELERLRASAREVE H   XXXXXXXX   T+  WRE DQKQV LR   ESG L SAARGPSTDDHDDH+HRHE+GAANTSS VDD+TQVAND NL + DGN DDRRLAVSRVVPHHDH+ KHRR  RE  DNGDVPRVSLDLEALL
Sbjct:    1 MPSSNRLLDLFRSE-QDVSPSSMGRAPSHGANNANNSVKQDLPQVTKGRAGYGNVQGIEVVETAVAFAAGGTRPRVETKLERENAHLREQLKFQGAVLDQLAGDVHTLELKAVGAASGATHLRPSPIHNQEATDVLREGPKN--GMSQGQKDEVHQENQEAGARCPDMCKGGTQGAHIDGEDPHGEVRNVDERDTFQPQDTADDLGQGHRGNTPPTPVQHARDESACDPHEKPDFPLETASDHVLRKVLPTSSSPTGGEPDSGDNDTDLRSELRAARLLTERIRGDFAAAQKAAEEKEQSHIGLLSRERKFRATVEAGLREKVHSMRQRARDREERLSAELSSVKAQLKEAVDLLATKEXXXXXXXXXXXXXXXXXXXXXARGKERDRQMSWLERRLQEVSSGETSAATLRLEEMTAALEAQQQELERLRASAREVESHYNHXXXXXXXXQRQTRATWREIDQKQVSLRA--ESGKLVSAARGPSTDDHDDHNHRHESGAANTSSCVDDNTQVANDANLRNDDGNCDDRRLAVSRVVPHHDHESKHRR--REGDDNGDVPRVSLDLEALL 563          
BLAST of mRNA_Ecto-sp13_S_contig7497.18681.1 vs. uniprot
Match: A0A6H5KMY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMY3_9PHAE)

HSP 1 Score: 754 bits (1946), Expect = 1.390e-267
Identity = 457/618 (73.95%), Postives = 473/618 (76.54%), Query Frame = 0
Query:   25 RAPSHGANNANSSVKQGLPPVTKGRAVYGNVHGTEVVENAVAIAAGGTRPRVETKVERENAHLREQLKFQ----------------------GAVLDQLAGDVHTLELKASVA-SGGTHLRPLSIHNQETKDLVREGPVGPEGMAQRPKDEVHQENHEAGARCPGICKGGTQGAQIDGEDPHGELPNVDERYITQRQHTADDLAQGHRGNTPPTPVQHERVESARDPREKPDFSIETASDHLLRKVVLVSYSPTGGEQDSGDNNTDLRSELRAARLLTERIRGDFAAAQKA---AEEKEQSHIGLLSRERKFRATVEAGLREKVHSMRRRARDREERLSAELSSVKAQLKEAIDLLATKEDE------------VRXXXXXXXXXXXXXXXALARGKERDRQMSWLERRLQEV----------------------------------SSGETCAATLRLEEMTAALEAQQQELERLRASAREVERHXXXXXXXXXXXXXXTKTIWRETDQKQVGLRRRKESGNLASAARGPSTDDHDDHD---HRHETGAANTSSSVDDDTQVANDVNLCDADGNGDDRRLAVSRVVPHHDHKGKHRRRVREDIDNGDVPRVSLDLEA 567
            RAPSHGANNANS VKQ LP VTKGRA YGNVHG EVVE AVA AAGGTRP V TK+ERENAHLREQLKFQ                      GAVLDQLAGDVHTLELKA+ A SG THLRP  IHNQE KD+V EGPVG EGMAQ PKDEVHQENHEAG RCP + +GGTQGAQIDGEDPHGEL +VDERY+ QR+ TADDLAQGHRGNTPPT VQHERVESARDP EKPD  IETASD +LR+VVL S SP GGE+DSGDN TDLRSELRAARLLTERIRGDFAAAQKA   AEEKEQSHI LLSRERKFRATVEAGLREKVHSMRRRARDREERLSAELSSVKAQLKEA+DLLATKEDE            VR               ALARGKERDRQMSWLERRLQEV                                  SSGET AATLRLEEMT  LEAQQQELERLRASAREVERH   XXXXXXXXXXXTKT WRE DQKQV LRRR+ESG LASAARGPSTDDH       HRHETGAANTSSSVDD+ QVAND NL + DGN D RRLAVSRVVPHHDH+GKHRRRVRED DNGDVPRVSLDLE 
Sbjct:    8 RAPSHGANNANS-VKQDLPRVTKGRAGYGNVHGIEVVEPAVAFAAGGTRPPVATKLERENAHLREQLKFQVPGLLSHVNRYATSITPFLLMQGAVLDQLAGDVHTLELKAAAAASGATHLRPSPIHNQEAKDVVLEGPVGSEGMAQGPKDEVHQENHEAGERCPDMSEGGTQGAQIDGEDPHGELRDVDERYVIQRKDTADDLAQGHRGNTPPTSVQHERVESARDPYEKPDCPIETASDQVLREVVLASSSPAGGERDSGDNKTDLRSELRAARLLTERIRGDFAAAQKALPRAEEKEQSHIDLLSRERKFRATVEAGLREKVHSMRRRARDREERLSAELSSVKAQLKEAMDLLATKEDELTKKLRNISPYKVRSMRARNAEQEDRTSAALARGKERDRQMSWLERRLQEVDSSASPLQFLAKDTFYTCQIKAQLNGARRKTCLVSSGETSAATLRLEEMTVVLEAQQQELERLRASAREVERHDNHXXXXXXXXXXXTKTTWREIDQKQVSLRRREESGKLASAARGPSTDDHXXXXXXXHRHETGAANTSSSVDDNAQVANDANLRNDDGNCDGRRLAVSRVVPHHDHEGKHRRRVREDDDNGDVPRVSLDLEC 624          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7497.18681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJU7_ECTSI9.890e-28783.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMY3_9PHAE1.390e-26773.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 411..438
NoneNo IPR availableCOILSCoilCoilcoord: 326..360

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7497contigEcto-sp13_S_contig7497:2914..7388 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7497.18681.1mRNA_Ecto-sp13_S_contig7497.18681.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7497 2914..7388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7497.18681.1 ID=prot_Ecto-sp13_S_contig7497.18681.1|Name=mRNA_Ecto-sp13_S_contig7497.18681.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=570bp
MLSSNRLLDLFRSELQNVSPSSIGRAPSHGANNANSSVKQGLPPVTKGRA
VYGNVHGTEVVENAVAIAAGGTRPRVETKVERENAHLREQLKFQGAVLDQ
LAGDVHTLELKASVASGGTHLRPLSIHNQETKDLVREGPVGPEGMAQRPK
DEVHQENHEAGARCPGICKGGTQGAQIDGEDPHGELPNVDERYITQRQHT
ADDLAQGHRGNTPPTPVQHERVESARDPREKPDFSIETASDHLLRKVVLV
SYSPTGGEQDSGDNNTDLRSELRAARLLTERIRGDFAAAQKAAEEKEQSH
IGLLSRERKFRATVEAGLREKVHSMRRRARDREERLSAELSSVKAQLKEA
IDLLATKEDEVRSMRACNAEQEDRASAALARGKERDRQMSWLERRLQEVS
SGETCAATLRLEEMTAALEAQQQELERLRASAREVERHHNHHHLLRRKQQ
QQTKTIWRETDQKQVGLRRRKESGNLASAARGPSTDDHDDHDHRHETGAA
NTSSSVDDDTQVANDVNLCDADGNGDDRRLAVSRVVPHHDHKGKHRRRVR
EDIDNGDVPRVSLDLEALL*
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