prot_Ecto-sp13_S_contig12217.1868.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12217.1868.1
Unique Nameprot_Ecto-sp13_S_contig12217.1868.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length106
Homology
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: D7FLF7_ECTSI (Probable Spc3 homolog, subunit of Signal Peptidase Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF7_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 5.210e-67
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQASQSVRFA 105
            MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQASQSVRFA
Sbjct:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQASQSVRFA 105          
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: A0A6V1NT77_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NT77_HETAK)

HSP 1 Score: 130 bits (328), Expect = 1.710e-36
Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ 97
            M+T WVRVNAVVFFGLTVLLVL+++ A STYLH+G P+++ LGV+  R+ +   G DR L++ D+DADL PAFNWN+KQLF FVVAEY T  NP+NQ
Sbjct:    4 MNTVWVRVNAVVFFGLTVLLVLAIICAFSTYLHKGEPNIKYLGVNTIRSLKSHGGVDRALISFDLDADLTPAFNWNIKQLFVFVVAEYATEKNPLNQ 100          
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: A0A835YJ42_9STRA (Signal peptidase 22kDa subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ42_9STRA)

HSP 1 Score: 129 bits (323), Expect = 8.740e-36
Identity = 60/97 (61.86%), Postives = 79/97 (81.44%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ 97
            M+T WVR+NAVVFFGLTVLL L+++TA STYLH+G P V+ L ++K ++FR     DR ++N D++ADLAPAFNWN+KQ+F FVVAE+ T TNP+NQ
Sbjct:    1 MNTVWVRLNAVVFFGLTVLLGLALMTATSTYLHEGHPTVKTLRLNKIKSFRSQSKVDRAIINFDLEADLAPAFNWNIKQIFVFVVAEFATKTNPLNQ 97          
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: A0A7S2XZ74_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ74_9STRA)

HSP 1 Score: 121 bits (303), Expect = 9.090e-33
Identity = 57/97 (58.76%), Postives = 76/97 (78.35%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ 97
            M+T WVR+NAVVFFG TVLL L+ + + ST+LH+G P ++ LG++  R+ R  +G DR+L++ D+DADL+ AFNWN+KQLF FVVAEY T TNP NQ
Sbjct:    1 MNTIWVRLNAVVFFGFTVLLCLACMCSFSTFLHKGEPHIKYLGLNTIRSMRAQKGGDRVLISFDIDADLSGAFNWNIKQLFVFVVAEYATKTNPFNQ 97          
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: A0A7S2SN40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN40_9STRA)

HSP 1 Score: 117 bits (292), Expect = 6.490e-31
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ 97
            MHT WVR+NAVVFFGLTV++VL+VLT  ST  H+G+P V  L ++   T R     D  +L+ D+ ADL+PAFNWN+KQLF FVVAEY T TNP+NQ
Sbjct:    1 MHTVWVRLNAVVFFGLTVIVVLAVLTWFSTVTHRGYPTVDTLQLNSIGTLRNHGERDIAILSFDLHADLSPAFNWNIKQLFVFVVAEYRTKTNPLNQ 97          
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: A0A7S4J3F9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3F9_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.970e-29
Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGF--PDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ 97
            MHT WVR+NAVVFFGLTVLL LS+L ALS   H     PDV++L +   R+ +   G DR LL+ D+D DL PAF+WN+KQLF +VVA YE+ TNP NQ
Sbjct:    1 MHTVWVRLNAVVFFGLTVLLGLSILAALSKSGHSNRYRPDVKRLELKTLRSLKSHGGVDRALLSFDIDVDLRPAFHWNIKQLFVYVVASYESDTNPNNQ 99          
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: A0A7R9UGA1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGA1_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.040e-29
Identity = 60/98 (61.22%), Postives = 68/98 (69.39%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYL-HQGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ 97
            MHT WVR+NAVVFF  TVLL LS L A+ T L H G P V  L + + R+ RK    DR +L  D+DADL  AFNWNVKQLF FVVAEY T TNP+NQ
Sbjct:   18 MHTIWVRLNAVVFFSFTVLLALSTLAAVQTMLFHDGQPVVHTLRLRELRSLRKHANIDRAMLTFDIDADLRGAFNWNVKQLFVFVVAEYATQTNPLNQ 115          
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: A0A7S2XM83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM83_9STRA)

HSP 1 Score: 109 bits (273), Expect = 4.080e-28
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLH--QGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ 97
            MHT WVR+NAVVFFGLTVLL LSVL A+S   H  +  P V KL +++ R+ +   G DR LL+ D+ AD+ PAF+WN+KQLF +VVA YET TNP NQ
Sbjct:    5 MHTVWVRLNAVVFFGLTVLLGLSVLAAISAIGHSTRHKPVVSKLSLNQLRSLKSHGGVDRALLSFDLHADMRPAFHWNIKQLFVYVVASYETDTNPNNQ 103          
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: B8CCG8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCG8_THAPS)

HSP 1 Score: 107 bits (267), Expect = 2.730e-27
Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLH--QGFPDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ 97
            MHT WVR+NAVVFFGLTVLL LS+L ALS   H  +  P + KL ++  R+ +   G DR LL+ D+ AD+ PAF+WN+KQ+F +VVA Y+T TNP NQ
Sbjct:    1 MHTVWVRLNAVVFFGLTVLLCLSILAALSKIGHTRRYQPKIHKLALNNLRSVKNHGGVDRALLSFDLHADMNPAFHWNIKQIFVYVVATYKTDTNPKNQ 99          
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Match: A0A7R9WMP4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WMP4_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.300e-26
Identity = 55/99 (55.56%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    1 MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGF--PDVRKLGVSKFRTFRKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQ 97
            MHT WVR+NAVVFFGLTVLL LS L A+S   H  +  P +  L + K R+ +   G DR LL+ D+ AD+APAF+WN+KQLF +VVA YETP   +NQ
Sbjct:   67 MHTLWVRLNAVVFFGLTVLLGLSCLAAVSKIGHSLYYKPVIHNLEIRKLRSLKSHGGVDRALLSFDIHADMAPAFHWNIKQLFVYVVASYETPNKKINQ 165          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12217.1868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF7_ECTSI5.210e-67100.00Probable Spc3 homolog, subunit of Signal Peptidase... [more]
A0A6V1NT77_HETAK1.710e-3663.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YJ42_9STRA8.740e-3661.86Signal peptidase 22kDa subunit n=1 Tax=Tribonema m... [more]
A0A7S2XZ74_9STRA9.090e-3358.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SN40_9STRA6.490e-3159.79Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4J3F9_9STRA2.970e-2958.59Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9UGA1_9STRA3.040e-2961.22Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XM83_9STRA4.080e-2858.59Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
B8CCG8_THAPS2.730e-2755.56Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7R9WMP4_9STRA1.300e-2655.56Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007653Signal peptidase complex subunit 3PFAMPF04573SPC22coord: 5..98
e-value: 6.7E-25
score: 87.5
IPR007653Signal peptidase complex subunit 3PIRSFPIRSF016089SPC3coord: 1..104
e-value: 4.3E-19
score: 66.6
IPR007653Signal peptidase complex subunit 3PANTHERPTHR12804MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23coord: 1..98
NoneNo IPR availablePANTHERPTHR12804:SF0SIGNAL PEPTIDASE COMPLEX SUBUNIT 3coord: 1..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12217contigEcto-sp13_S_contig12217:2044..4367 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12217.1868.1mRNA_Ecto-sp13_S_contig12217.1868.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12217 2044..4367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12217.1868.1 ID=prot_Ecto-sp13_S_contig12217.1868.1|Name=mRNA_Ecto-sp13_S_contig12217.1868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
MHTAWVRVNAVVFFGLTVLLVLSVLTALSTYLHQGFPDVRKLGVSKFRTF
RKSEGTDRLLLNIDVDADLAPAFNWNVKQLFAFVVAEYETPTNPVNQASQ
SVRFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007653SPC3