prot_Ecto-sp13_S_contig7487.18674.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7487.18674.1
Unique Nameprot_Ecto-sp13_S_contig7487.18674.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length95
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7487.18674.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.170e-34
Identity = 76/95 (80.00%), Postives = 77/95 (81.05%), Query Frame = 0 
Query:    1 MTSSLEDGEDAAQIGNSFIDVLGLVTSKTAAMDFDAGSLSVSVPEGAINPTSVQGTRRRMTTSSSSPAGRIINGPLLQRRRMDLIATASAKIMIA 95
            MTSSLEDGEDAA IGNSFIDVLGLVTSKTAAMDFDAGSLSVSVPEGAINPTSVQ             AGRIING +LQRRRMD IATASA I IA
Sbjct: 1123 MTSSLEDGEDAALIGNSFIDVLGLVTSKTAAMDFDAGSLSVSVPEGAINPTSVQRXXXXXXXXXXXXAGRIINGRILQRRRMDSIATASATITIA 1217
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BLAST of mRNA_Ecto-sp13_S_contig7487.18674.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 4.680e-13
Identity = 44/69 (63.77%), Postives = 50/69 (72.46%), Query Frame = 0 
Query:    1 MTSSLEDGEDAAQIGNSFIDVLGLVTSKTAAMDFDAGS-LSVSVPEGAINPTSVQGTRRRMTTSSSSPA 68
            MTSSLEDGEDAA IGNSFIDVLGLVTSKT+AMDFDAG  +++S P       S+       TTSS SP+
Sbjct:  238 MTSSLEDGEDAALIGNSFIDVLGLVTSKTSAMDFDAGEDITLSAPVRMTMRASMA------TTSSKSPS 300
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BLAST of mRNA_Ecto-sp13_S_contig7487.18674.1 vs. uniprot
Match: D7FLQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ0_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.320e-10
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0 
Query:    1 MTSSLEDGEDAAQIGNSFIDVLGLVTSKTAAMDFDAGSLSVS 42
            MTS+LEDGEDAA IGNSFIDVLGLVTSKTAAMD  AG   +S
Sbjct:  181 MTSNLEDGEDAALIGNSFIDVLGLVTSKTAAMDLAAGYCPLS 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7487.18674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4X3_ECTSI1.170e-3480.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLT2_9PHAE4.680e-1363.77GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLQ0_ECTSI1.320e-1080.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7487contigEcto-sp13_S_contig7487:4293..4762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7487.18674.1mRNA_Ecto-sp13_S_contig7487.18674.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7487 4293..4779 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7487.18674.1 ID=prot_Ecto-sp13_S_contig7487.18674.1|Name=mRNA_Ecto-sp13_S_contig7487.18674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp
MTSSLEDGEDAAQIGNSFIDVLGLVTSKTAAMDFDAGSLSVSVPEGAINP
TSVQGTRRRMTTSSSSPAGRIINGPLLQRRRMDLIATASAKIMIA
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