prot_Ecto-sp13_S_contig7485.18672.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7485.18672.1
Unique Nameprot_Ecto-sp13_S_contig7485.18672.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length366
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7485.18672.1 vs. uniprot
Match: D7FUW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUW0_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 1.050e-131
Identity = 277/337 (82.20%), Postives = 284/337 (84.27%), Query Frame = 0 
Query:    1 MLTQASSLLKQRLESTERIRNRQKELIRELQAVEADIAFANAGNMAGLVSTDPLPNLSPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXX--GNNTEHDHTVDERRVRRSRGSASDRARTPLGGKHGEQRRSPPTGTNSAKGDNFSAGRTATVELKDGGGGGG--TRLGRAAASASVRTLSRAAAVRPERPRRGGGPTDGATKSGISATGARKSSEGAVVSKAKRIQTGRTRSSIIDSSSVDTKARRAEVDRKSKSATTATAQSRXXXXXXXXXXXXXXXXRVLRRQASTKTKVRSGATFGAPTAASAGKIRTAPRRAVVSSGGRVGATKRAGDGCIP 333
            MLTQASSLLKQRLESTERIRNRQKELIRELQAVEADIAFANAGNMAG+VSTDPLPNLSPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXX  GN+TE  H VDER  RRSRG ASDRARTPLGGKHGEQRRSPPTGT SAK ++F AG  A VEL+D        TRLGRAAASASVRT+ RAA VRPERPRR GGP DGATKSGISATGARKSSEGAV SKA+R QTGRT SSIIDSSS DTKARRAEVDRKSKSATT TAQSR                RVLRRQASTKTKV SGATFGAPTAASAGKIRT PRR VVS GG V ATKRAGDGCIP
Sbjct:  209 MLTQASSLLKQRLESTERIRNRQKELIRELQAVEADIAFANAGNMAGMVSTDPLPNLSPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDTERHHAVDERYGRRSRGGASDRARTPLGGKHGEQRRSPPTGTKSAKSNDFPAGCAAAVELEDXXXXXXXXTRLGRAAASASVRTVGRAATVRPERPRRSGGPADGATKSGISATGARKSSEGAVASKARRTQTGRTSSSIIDSSSADTKARRAEVDRKSKSATTTTAQSRHRAATSSTPAAAPSRNRVLRRQASTKTKVPSGATFGAPTAASAGKIRTTPRRPVVSPGGHVRATKRAGDGCIP 545
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7485.18672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUW0_ECTSI1.050e-13182.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7485contigEcto-sp13_S_contig7485:4472..6240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7485.18672.1mRNA_Ecto-sp13_S_contig7485.18672.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7485 4468..7016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7485.18672.1 ID=prot_Ecto-sp13_S_contig7485.18672.1|Name=mRNA_Ecto-sp13_S_contig7485.18672.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=366bp
MLTQASSLLKQRLESTERIRNRQKELIRELQAVEADIAFANAGNMAGLVS
TDPLPNLSPPLPPPPPPLALPPTARRRKASSSSLLAHRRGNNTEHDHTVD
ERRVRRSRGSASDRARTPLGGKHGEQRRSPPTGTNSAKGDNFSAGRTATV
ELKDGGGGGGTRLGRAAASASVRTLSRAAAVRPERPRRGGGPTDGATKSG
ISATGARKSSEGAVVSKAKRIQTGRTRSSIIDSSSVDTKARRAEVDRKSK
SATTATAQSRHRAATSATPAVAPSRNRVLRRQASTKTKVRSGATFGAPTA
ASAGKIRTAPRRAVVSSGGRVGATKRAGDGCIPPSRAFACRPGQIKNVRG
RRRAASSRGDDNRTR*
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