prot_Ecto-sp13_S_contig7480.18669.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7480.18669.1
Unique Nameprot_Ecto-sp13_S_contig7480.18669.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length493
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7480.18669.1 vs. uniprot
Match: A0A6H5JY66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY66_9PHAE)

HSP 1 Score: 932 bits (2410), Expect = 0.000e+0
Identity = 462/493 (93.71%), Postives = 475/493 (96.35%), Query Frame = 0 
Query:    1 GLFGERSGQHATGRNLAACSNGYWIKMPTGGGYPLFAVADCAAYPEEIASSSTWMIITCEGCVGTEATSAQTITCATGADAFVATPSPVSPVVAGGEETVTLPGAGPSTCEAVTVTGPRAGGYTVGGSINGAADVYSDDGLWRMFFASPAPALSRRARRSLYFSADGGDAGPLSTELAPDTGDMLDRRGLQTCDGYWYITPVDDRYPAYAVMDCGEHPVDIVSSDWLYLDCEDCEVVTADSKSDAFCTGAPANLKRGGSFNTPAPVALDFVGTPGPGSSSSGSSSTTCTELYVTGDFPGNYTANGTYRGKLDFFNDDGTVNLYFELADSSRRLLSSAGDEREGERRLLPGEVMASALEERYHASAASRRLAICTSGYWIITQVAGDGYPVLGVPDCADHPVDIRANTWLVASCESCGVQEAPSFVAPTIACASGAAGGGAGGVTPAPALPALCGTVYVTGPAAGVYVQQGEYGTRGDFFSGNNAWNMYWTFYA 493
            GLFGERS Q ATGRNLAACSNGYWIKMPTGGGYPLFAVADCAAYPEEIASSSTWMI+TCEGCVGTEATS+QTITCATGADAFVATPSPVSPVVAGG ET+TLPGAGPSTCEAVTVTGPRAGGYTVGGSINGAADVYSDDGLWRMFFASPAPALSRRARRSL+FSADGGDAGPLS ELAPDT D  DRRGLQTCDGYWYITPVDDRYPAYAVMDCGEHPVDIVSSDWLYLDCEDCEVVTADSK DA CTGAPAN+KRGGSFNTPAPV LDFVGTPGP +SSSGS+STTCTELYVTG+FPGNYTANGTYRGKLDFFNDDGTVNLYFELADSSRRLLSSAG+EREG RRLLPGE+MASALEERYHA AASRRLAICTSGYWIITQVAGDGYPVLGVPDCADHPVDIRANTWLVASCESCGVQEAPSFVAPTIACASGAAG    G TP+PALPA+CGTVYVTGPAAGVYVQQG+YGTRGDFFSGNNAWNMYWTFYA
Sbjct:  297 GLFGERSAQQATGRNLAACSNGYWIKMPTGGGYPLFAVADCAAYPEEIASSSTWMIVTCEGCVGTEATSSQTITCATGADAFVATPSPVSPVVAGGGETITLPGAGPSTCEAVTVTGPRAGGYTVGGSINGAADVYSDDGLWRMFFASPAPALSRRARRSLHFSADGGDAGPLSAELAPDTRDTHDRRGLQTCDGYWYITPVDDRYPAYAVMDCGEHPVDIVSSDWLYLDCEDCEVVTADSKPDASCTGAPANIKRGGSFNTPAPVVLDFVGTPGPDTSSSGSASTTCTELYVTGEFPGNYTANGTYRGKLDFFNDDGTVNLYFELADSSRRLLSSAGEEREGGRRLLPGELMASALEERYHALAASRRLAICTSGYWIITQVAGDGYPVLGVPDCADHPVDIRANTWLVASCESCGVQEAPSFVAPTIACASGAAGXXXXGATPSPALPAICGTVYVTGPAAGVYVQQGDYGTRGDFFSGNNAWNMYWTFYA 789
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BLAST of mRNA_Ecto-sp13_S_contig7480.18669.1 vs. uniprot
Match: D7G5Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q9_ECTSI)

HSP 1 Score: 829 bits (2141), Expect = 3.170e-297
Identity = 416/447 (93.06%), Postives = 422/447 (94.41%), Query Frame = 0 
Query:    1 GLFGERSGQHATGRNLAACSNGYWIKMPTGGGYPLFAVADCAAYPEEIASSSTWMIITCEGCVGTEATSAQTITCATGADAFVATPSPVSPVVAGGEETVTLPGAGPSTCEAVTVTGPRAGGYTVGGSINGAADVYSDDGLWRMFFASPAPALSRRARRSLYFSADGGDAGPLSTELAPDTGDMLDRRGLQTCDGYWYITPVDDRYPAYAVMDCGEHPVDIVSSDWLYLDCEDCEVVTADSKSDAFCTGAPANLKRGGSFNTPAPVALDFVGTPGPGSSSSGSSSTTCTELYVTGDFPGNYTANGTYRGKLDFFNDDGTVNLYFELADSSRRLLSSAGDEREGERRLLPGEVMASALEERYHASAASRRLAICTSGYWIITQVAGDGYPVLGVPDCADHPVDIRANTWLVASCESCGVQEAPSFVAPTIACASGAAGGGAGGVTPAP 447
            GLFGERSGQ ATGRNLAACSNGYWIKMPTGGGYP FAVADCAAYPEEIASSS WMI+TCEGCVGTEATSAQ ITCATG DAFVATPSPVSPVVAGGEETVTLPGAGPSTCEA+TVTGPRAGGYTV GSINGAAD YSDDGLWRMFFA PA ALSRRARRSLYFSA+GGDA PLSTELAPDT D  DRRGLQTCDGYWYITPVDDRYPAYAVMDCGEHPVDIVSSDWLYLDCEDCEVVTADSK DA CTGAPANLKRGGSFNTPAPVALDFVGTPGPGSSSSGSSSTTCTELYVTGDFPGNYTANGTYRG+LDFF+DDGT NLYFELADSSRRLLSSA +EREGERRLLPGEVMASALEERYHA AASRRLAICTSGYWIITQVAGDGYPVLG PDCADHPVDIR NTWLVASCESCGVQEAPSFVAPTI CASGAAGGGAG   P P
Sbjct:  230 GLFGERSGQQATGRNLAACSNGYWIKMPTGGGYPFFAVADCAAYPEEIASSSAWMIVTCEGCVGTEATSAQAITCATGTDAFVATPSPVSPVVAGGEETVTLPGAGPSTCEAITVTGPRAGGYTVEGSINGAADAYSDDGLWRMFFAPPASALSRRARRSLYFSAEGGDAVPLSTELAPDTRDTHDRRGLQTCDGYWYITPVDDRYPAYAVMDCGEHPVDIVSSDWLYLDCEDCEVVTADSKPDASCTGAPANLKRGGSFNTPAPVALDFVGTPGPGSSSSGSSSTTCTELYVTGDFPGNYTANGTYRGRLDFFSDDGTFNLYFELADSSRRLLSSADEEREGERRLLPGEVMASALEERYHAWAASRRLAICTSGYWIITQVAGDGYPVLGAPDCADHPVDIRTNTWLVASCESCGVQEAPSFVAPTITCASGAAGGGAGWRDPLP 676
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7480.18669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JY66_9PHAE0.000e+093.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5Q9_ECTSI3.170e-29793.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7480contigEcto-sp13_S_contig7480:479..7137 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7480.18669.1mRNA_Ecto-sp13_S_contig7480.18669.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7480 479..7139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7480.18669.1 ID=prot_Ecto-sp13_S_contig7480.18669.1|Name=mRNA_Ecto-sp13_S_contig7480.18669.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=493bp
GLFGERSGQHATGRNLAACSNGYWIKMPTGGGYPLFAVADCAAYPEEIAS
SSTWMIITCEGCVGTEATSAQTITCATGADAFVATPSPVSPVVAGGEETV
TLPGAGPSTCEAVTVTGPRAGGYTVGGSINGAADVYSDDGLWRMFFASPA
PALSRRARRSLYFSADGGDAGPLSTELAPDTGDMLDRRGLQTCDGYWYIT
PVDDRYPAYAVMDCGEHPVDIVSSDWLYLDCEDCEVVTADSKSDAFCTGA
PANLKRGGSFNTPAPVALDFVGTPGPGSSSSGSSSTTCTELYVTGDFPGN
YTANGTYRGKLDFFNDDGTVNLYFELADSSRRLLSSAGDEREGERRLLPG
EVMASALEERYHASAASRRLAICTSGYWIITQVAGDGYPVLGVPDCADHP
VDIRANTWLVASCESCGVQEAPSFVAPTIACASGAAGGGAGGVTPAPALP
ALCGTVYVTGPAAGVYVQQGEYGTRGDFFSGNNAWNMYWTFYA
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