prot_Ecto-sp13_S_contig7470.18657.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7470.18657.1
Unique Nameprot_Ecto-sp13_S_contig7470.18657.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length219
Homology
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: D8LEC4_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEC4_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 1.100e-129
Identity = 212/216 (98.15%), Postives = 214/216 (99.07%), Query Frame = 0
Query:    1 MGDRLEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVK 216
            MGDRLEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXV DWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRV LLVALRDITDGKIYVEAERAKLTR+LAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKV+
Sbjct:    1 MGDRLEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVEDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVLLLVALRDITDGKIYVEAERAKLTRMLAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVR 216          
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: A0A835ZAZ9_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ9_9STRA)

HSP 1 Score: 264 bits (675), Expect = 1.280e-83
Identity = 146/216 (67.59%), Postives = 175/216 (81.02%), Query Frame = 0
Query:    1 MGDRLEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVK 216
            M DRLEERKDFT ++  K+PEA +L EGGKL + LD++M+LER CRVGND        XXXXXXXXX       N T TL++KRRGQ  + +TAMVQE + WLDETPDK T+++L+VALRDITDGKI+VE ERA+LTR+LA IKE+DGDVAGA EVLQEV VETYGAL KKEK DFILEQ+RLTL KKD+VRALIQSRKINRK++  +DMQ++KV+
Sbjct:    1 MSDRLEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVR 216          
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: A0A7S2V6L0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6L0_9STRA)

HSP 1 Score: 256 bits (653), Expect = 3.700e-80
Identity = 135/211 (63.98%), Postives = 166/211 (78.67%), Query Frame = 0
Query:    5 LEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKV 215
            LE +KDFT EV+ KLP A KL+EGG+L + LD +  +E+ CR+GND  NLKE+I           DW QLN TLTL+SKRR Q +KAV  MVQEA+GW++ETP  + +++LL  LRDITDGKI++EAERA+LTR LA + E  G V  AA+VLQEVHVETYG+L K+EKA+FILEQIRLTLAKKD+VRALIQSRKI+RKVL +EDMQDIK+
Sbjct:    3 LEIKKDFTKEVSEKLPIAIKLSEGGQLTEALDSLAGVEKKCRLGNDTKNLKEIILTMVKMCRKCEDWEQLNATLTLVSKRRSQSTKAVLGMVQEAMGWIEETPTPEAKLALLNTLRDITDGKIFLEAERARLTRQLAALHEAAGRVDQAADVLQEVHVETYGSLDKREKAEFILEQIRLTLAKKDYVRALIQSRKISRKVLEEEDMQDIKI 213          
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: A0A7S3XTB1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTB1_HETAK)

HSP 1 Score: 249 bits (635), Expect = 8.070e-80
Identity = 124/212 (58.49%), Postives = 168/212 (79.25%), Query Frame = 0
Query:    5 LEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVK 216
            LEE+KDF+ EV  KLP A KLAE G+L   L+++ S+E+ CR+GND  NLKEVI           +W QLN+TLT++SKRR Q++KA+T MV+ ++ W+ ETP KD +V+L++ LRDITDGKI++EAERA+LTRILA + E DGDV  A + + EVHVETYGA+ KKEKA+FILEQ+RLTLA++D+VRA+I SRK+NRK+L +++MQ+IKV+
Sbjct:   20 LEEKKDFSKEVGEKLPAATKLAEAGQLEPALELLTSVEKKCRLGNDVANLKEVILTMVRLCRKAENWEQLNSTLTVLSKRRSQNTKAITGMVRTSMEWVPETPSKDAKVALVITLRDITDGKIFLEAERAQLTRILADVYEADGDVQAACDCMGEVHVETYGAVGKKEKAEFILEQLRLTLAREDYVRAVINSRKLNRKILKEDEMQEIKVR 231          
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: A0A7S1UA35_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA35_9STRA)

HSP 1 Score: 228 bits (580), Expect = 6.540e-69
Identity = 123/213 (57.75%), Postives = 160/213 (75.12%), Query Frame = 0
Query:    5 LEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVS-LLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVK 216
            L+E+KD++AEV ++LP A+ LAEGG+L + +D +M LE+ CR+GND  +LK+++          GDW  +NTTL  ISKRR Q   A+ AM  EA+ +LDE     T V  LL  LR++TDG+I+VEAERAKLT+ LA IKEEDG V  A ++LQEVHVETYGALTKKEKA+FILEQIRL+L K+DFVRALI SRK+N+KVL ++ M D+K+K
Sbjct:   28 LKEKKDYSAEVESRLPGAQALAEGGQLREAIDGLMGLEKACRLGNDNISLKKLVLAMVKMCHAAGDWDMVNTTLLTISKRRSQSKVAIIAMTNEAMTYLDEPGLARTEVQKLLETLREVTDGRIFVEAERAKLTKRLADIKEEDGLVDEACDILQEVHVETYGALTKKEKAEFILEQIRLSLKKRDFVRALINSRKVNKKVLEEDGMDDLKLK 240          
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: A0A7S2RAT1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAT1_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.030e-66
Identity = 109/212 (51.42%), Postives = 160/212 (75.47%), Query Frame = 0
Query:    5 LEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVK 216
            +E+++D++      +PEA  L++ G+L+  +D+++SLE+ CR+GND   LK  +          GDWA+LN+ L  I+KR  Q   AV A+V   +GW+D TPDK T+V LLVALR++TDGKIYVEAERA++TR LA+IKE DGD+AGA +VL +V+VETYGAL+K+EK DFILEQIR+T+AK+D+VR LI ++K+ +K++ + D+QD+K++
Sbjct:   37 IEKKEDYSELAGTLVPEATLLSQNGELSKAVDMLLSLEKKCRLGNDVSTLKLTVTTICELCRGQGDWAKLNSALGTIAKRHQQSKYAVMAVVNLCMGWIDTTPDKATKVDLLVALREVTDGKIYVEAERARITRQLAEIKEADGDIAGACDVLLDVYVETYGALSKREKVDFILEQIRMTIAKQDWVRVLIVAKKVQKKIIDEPDLQDLKMR 248          
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: A0A4D9CRV0_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRV0_9STRA)

HSP 1 Score: 219 bits (558), Expect = 4.160e-66
Identity = 116/220 (52.73%), Postives = 163/220 (74.09%), Query Frame = 0
Query:    1 MGDRLEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVG--WLDETPDKDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDED--MQDIKVK 216
            M  +L E+KD +A V A LPEAK LA+ GKLA+ +++++ +E+  R+GND  +LKEV+           DW Q+NTTLT +SKRR Q+  A++AMVQEA+G  +LD TPD +++  L+V LRDITDGKI+VE ERA+LTR L+ + E +G VA A +++Q+VHVETYG+L K+EK +FILEQIRLTLAKKDF+R  I ++K+ +K+L  ED  +Q +K+K
Sbjct:    1 MDGQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNTTLTQLSKRRSQNKAAISAMVQEAMGPSYLDATPDAESKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLK 220          
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: A0A7S2GQN4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQN4_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.410e-61
Identity = 108/212 (50.94%), Postives = 146/212 (68.87%), Query Frame = 0
Query:    5 LEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVK 216
            +E+ +DFT     ++ EA+ L + G+L   +++++SLE+ CR+G D  NLK+ +          GDW +LN TL +ISKR  Q   A++A+V +   WLDETPDK+T+V LL  L ++T GKIYVE ERA LTR LA IKE DGDV GA   + EV+VETYGAL K+EK DFILEQIRL + KKD VRA I S+K++RK L D + QD+K++
Sbjct:   35 IEKTEDFTELAKTQIAEAQLLVDNGELQKAIELLLSLEKKCRLGLDIANLKQTVTAMTLLCRKTGDWDKLNATLLVISKRHQQSKHAISAVVAQGSSWLDETPDKETKVKLLKTLLEVTVGKIYVEGERATLTRQLAAIKEADGDVDGACAAMLEVYVETYGALNKREKIDFILEQIRLCILKKDMVRAYIVSKKVSRKSLDDNEHQDLKLR 246          
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: A0A7S2XQT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQT3_9STRA)

HSP 1 Score: 200 bits (509), Expect = 8.970e-60
Identity = 117/226 (51.77%), Postives = 155/226 (68.58%), Query Frame = 0
Query:    2 GDRLEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGW---------LDETPD--KDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVK 216
            G +LEER D T E  AKL +++ L     L + L ++  LE+ CR+GND PNL  V           GD A +  TL  ++ RR Q +KA++A+V + + W         L  T D  K++R+ L+VALRDITDGK+++EAERA+LTR LA IKEEDGDVAGAAEVLQ+VHVETYG+L+K+EK +FILEQ+RLTLAK+DF+RA I S KINRK + +E M+ +K K
Sbjct:   11 GGQLEERVDLTKETDAKLAQSQSLP----LKEALALLGGLEKQCRIGNDLPNLVRVCEASMQLAKDSGDDAVVVQTLEHLASRRSQKTKAISALVAKCLPWVLTEKSHVPLAVTSDEQKESRLKLVVALRDITDGKLFLEAERARLTRALATIKEEDGDVAGAAEVLQDVHVETYGSLSKREKVEFILEQMRLTLAKQDFIRASIVSGKINRKNISEEGMEALKTK 232          
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Match: UPI0016033A9D (26S proteasome non-ATPase regulatory subunit 12-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016033A9D)

HSP 1 Score: 199 bits (506), Expect = 3.860e-59
Identity = 101/207 (48.79%), Postives = 148/207 (71.50%), Query Frame = 0
Query:   10 DFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVK 216
            D++A V  KLP  + LA+ GKL + LDI++SLE+  R   D  +   ++           +W  LN  +TL+SKRR Q  +A+T MVQEAV ++D+TP+ +T++ L+  LR +T+GKIYVE ERA+LTRILAKIKE++G++  AA VLQ++ VET+G++ KKEK +FILEQ+RL LAKKD++R  I S+KIN KV  ++D +++K+K
Sbjct:   14 DYSATVDEKLPLCENLAKEGKLQEALDILLSLEKQTRTAADMHSTARILVKVAQLCFECNNWEALNENITLLSKRRSQLKQAITKMVQEAVTYVDKTPNMETKLKLIDTLRTVTEGKIYVEIERARLTRILAKIKEDEGNITEAANVLQDLQVETFGSMEKKEKVEFILEQMRLCLAKKDYIRTQIISKKINTKVFSEKDTEELKLK 220          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7470.18657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEC4_ECTSI1.100e-12998.15PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZAZ9_9STRA1.280e-8367.59PCI domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2V6L0_9STRA3.700e-8063.98Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XTB1_HETAK8.070e-8058.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1UA35_9STRA6.540e-6957.75Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2RAT1_9STRA1.030e-6651.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CRV0_9STRA4.160e-6652.73PCI domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2GQN4_9STRA2.410e-6150.94Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2XQT3_9STRA8.970e-6051.77Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
UPI0016033A9D3.860e-5948.7926S proteasome non-ATPase regulatory subunit 12-li... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4PANTHERPTHR1085526S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4coord: 6..216
IPR03529726S Proteasome non-ATPase regulatory subunit 12PANTHERPTHR10855:SF126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12coord: 6..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7470contigEcto-sp13_S_contig7470:12..3113 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7470.18657.1mRNA_Ecto-sp13_S_contig7470.18657.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7470 12..3113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7470.18657.1 ID=prot_Ecto-sp13_S_contig7470.18657.1|Name=mRNA_Ecto-sp13_S_contig7470.18657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp
MGDRLEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGND
FPNLKEVILTAARLCRQVGDWAQLNTTLTLISKRRGQHSKAVTAMVQEAV
GWLDETPDKDTRVSLLVALRDITDGKIYVEAERAKLTRILAKIKEEDGDV
AGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKI
NRKVLLDEDMQDIKVKRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040134PSMD12/CSN4
IPR035297PSMD12