mRNA_Ecto-sp13_S_contig746.18646.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: D7FPE6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE6_ECTSI) HSP 1 Score: 700 bits (1807), Expect = 2.220e-247 Identity = 428/459 (93.25%), Postives = 433/459 (94.34%), Query Frame = 2
Query: 26 MATATA-VAAQPGDPGSSGTSSLGGQYEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVPQDLDMLRAKVLEELQVPHQRRVSLLEAEVERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRQLEEAEAVKSQLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKEACAGKDRVALEARAEARHAAERLALEWGREKAELKAANEGLIKRIALAERRSREASDQAANRFRAAQTVEERVRSETGKEASTLRESLSRLEAEVERLXXXXXXVGSSXXXXXXXXXXXXXXXXXXXXRVLREKEALRER 1399
MATATA VAAQPG + SLGGQYEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVPQDLDMLRAKV EELQVPHQRRV LEAEVER RQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRR+LEEAEAVK+QLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKEACAGKDRVALEARAE RHAAERLALEWGREKAELKAANEGLIKRIALAERRSREAS+QAANRFRAAQ VEERVRSETGKE S LRESLS+LEAEVERL VGSS XXXXXXXXXXXXXXXXXX LREKEALRER
Sbjct: 1 MATATAAVAAQPGXXXXXXSGSLGGQYEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVPQDLDMLRAKVQEELQVPHQRRVGSLEAEVERHRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRKLEEAEAVKAQLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKEACAGKDRVALEARAEVRHAAERLALEWGREKAELKAANEGLIKRIALAERRSREASEQAANRFRAAQQVEERVRSETGKETSALRESLSQLEAEVERLRLEGERVGSSAQXXXXXXXXXXXXXXXXXXXXLREKEALRER 459
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: A0A835YNG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG1_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.270e-66 Identity = 147/318 (46.23%), Postives = 206/318 (64.78%), Query Frame = 2
Query: 92 GGQYEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVPQDLDMLRAKVLEELQVPHQRRVSLLEAE------VERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRQLEEAEAVKSQLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKEACAGKDRVALEARAEA 1027
G +Y+++L TV LQGDLQR +GVCQSL +N+ LK NY+ ++ EL+ R+K++ RKQLLEAVE++++ D+ TE +VHKW+VQLE RT+ELE+L+++LVPQDLDMLR ++ EE++ PH+RR++ +EAE V+RQ QMF RRD ERC+AEYEQ TID RE E + QHK+E L+MR+ +LEA+ AD + L E++AVR+++E E+ERH+LVLAHQ E AA + L+A+K AL RRC E +T ++L+ A A K+R A EARA+A
Sbjct: 6 GSRYDQMLNTVTGLQGDLQRALGVCQSLREENETLKVNYDTIKGELLRTRDKYSAQRKQLLEAVEAKIEGDRTTEAVVHKWRVQLEARTKELESLRSQLVPQDLDMLRMQMQEEIEGPHKRRLAAVEAEAEKHRRVQRQLQMFFNVRRDLERCRAEYEQSTIDHTREAETVAAQHKSEVAALRMRLAELEATAADXXXXXXXXXXXXXXXXXXXADAHLRQELSAVRADKEKLEVERHRLVLAHQGEVAAARAAAAALDAEKAALARRCEELVETAQXXXXXXXXXXXXXXXXXXXXARLRGAVAAKERAANEARADA 323
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: A0A7S4DKB8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKB8_HETAK) HSP 1 Score: 148 bits (373), Expect = 6.240e-38 Identity = 91/194 (46.91%), Postives = 126/194 (64.95%), Query Frame = 2
Query: 62 DPGSSGTSSLGGQ-YEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVPQDLDMLRAKVLEELQVPHQRRVSLLEAEVERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDL 640
+P SSG SS Q YE+LL TV SLQGDLQRT+ VCQ+L S N+ LK NYEAVR E+I +REK+ RKQ +A E+++ A++ + W+ +L + E E LQ KL PQD++ LR + EEL+ + + + E EVE+ RQMF RR++E+ K EY Q+T D +EME LH Q KAE+ L+ ++ L
Sbjct: 3 NPDSSGLSSSSSQRYEQLLKTVSSLQGDLQRTLAVCQNLKSDNEILKKNYEAVRGEIIGVREKYQKARKQAAQATEAKLLAERDVFEQIANWENKLHRKVLEYEELQKKLAPQDINALRVDIKEELEKEFETKQRITEDEVEKWRQMFYNVRREYEKIKTEYGQFTADSSKEMELLHDQAKAEAAALRGEIEAL 196
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: A0A8J2SAS7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAS7_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.360e-37 Identity = 115/279 (41.22%), Postives = 159/279 (56.99%), Query Frame = 2
Query: 65 PGSSGTSSLGGQYEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVPQDLDMLRAKVLEELQVPHQRRVSLLEAEVERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRQLEEA----EAVKSQLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEA 889
P + T G Y LL TV SLQ DLQ+T+ C SL QN L+ +++ R E++ REK R +L+E +++++AD+ TE LV KWKVQL+ RTRELE +Q KLVPQDLDMLR ++ EEL+VPHQ+++S LEAE +QMF RR+ ER K E+ YT Q + H AE L+ RV +LEA+ AD +G L+R LE E +L E +R E + A +++ V ++ A L+ D L+RR AEA
Sbjct: 9 PNGTPTGDDGAAYATLLNTVESLQADLQQTITTCHSLREQNAILQRDHDKAREEVLRQREKVAANRTELVEQAKAKIEADRATEALVAKWKVQLDSRTRELEEVQKKLVPQDLDMLRIQIQEELEVPHQQKISDLEAEARSFQQMFFNVRRELERSKTEFAAYTEHQEAARASDRATHDAEHRGLRRRVVELEAAAADGP---DGADLQRGLEAKVLALEVKCRELMKENDDLRREHDGAIGDKNAAVQGRAEDACAAKALTGQLKTDVVGLERRLAEA 284
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: A0A833T0I5_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T0I5_PHYIN) HSP 1 Score: 131 bits (329), Expect = 4.020e-29 Identity = 106/323 (32.82%), Postives = 174/323 (53.87%), Query Frame = 2
Query: 26 MATATAVAAQPGDPGSSG----TSSLGGQYEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVP-QDLDMLRAKVLEELQVPHQRRVSLLEAEVERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRQLEEAEAVKSQLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKE 979
M A + AA P P S G ++ G +Y+ LL + L DLQ+T Q+L + D + ++ E+ L E+++ + L++ E ++++D++ E L+ KWK QLE + R E+LQ K P +DL+ LR K+ EEL+ P+Q+R+ L+ E+ERQR M RR+ E K EYEQ++IDQG EME + + ++ + L+ ++Q E + A++ E+ R L +Q E A+ L E VR E + + A + A R +TL+ D KA R+ A+D + R + D A+++L + E L+E
Sbjct: 1 MEAAASAAAPPVTPASLGGFSEAANAGSRYDALLRQIVQLNTDLQKTAAFSQTLQRERDDAQQISTKLKGEVKRLHERYDKMQLVLMQETEQKIESDRKHEELIGKWKKQLEAKVRAFESLQKKFAPPRDLEQLRIKIQEELEGPYQQRIDNLQDEMERQRLMSFDMRREFETLKTEYEQFSIDQGNEMECVQETYELTLNDLRRKLQAAEDAAANSQHAEKARRLEQQREAAQIEIKALRNEARDVREELQRVSEQSENEKSACELRLADEATRNATLDLDLKACGRQLTRAKDEYESIRSKWDHAQNKLLELTSESESLRE 323
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: A0A813AST6_9DINO (CEP83 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AST6_9DINO) HSP 1 Score: 126 bits (316), Expect = 4.280e-28 Identity = 86/232 (37.07%), Postives = 137/232 (59.05%), Query Frame = 2
Query: 101 YEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVP-QDLDMLRAKVLEELQVPHQRRVSLLEAEVERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRQLEEAEAV-------KSQLHAEMAAVRSEREAA 772
Y++LL + LQ DL RT+ V QSL ++ND L++ YE V+ EL ++ KH+ R+Q ++ E+ ++ +Q+ E LV +WK Q A+Q ++ P +DLD+LR ++ EEL+VPHQ+RV+ LEA +E+ R ++ ++R+ E KAE+EQ + D + EA H A+ LK R+ DLE D +GR L A+A +++L AE +R +R+AA
Sbjct: 25 YDRLLQQINELQSDLGRTLSVAQSLRTENDSLRAGYEKVKQELTRMKGKHDAVRQQYMD--EAELELEQKHEELVSEWKQQXXXXXXXFLAMQEQMAPPRDLDVLRVRIQEELEVPHQKRVAELEAAIEKHRALYFTSKREAELLKAEFEQSSADHAADAEATAAAHTAQVKTLKRRIADLEERL-----DGDGRTAADALRAAQAAADDAAVARARLAAEATEMREQRDAA 249
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: A0A6A3ZHS8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZHS8_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.040e-27 Identity = 109/320 (34.06%), Postives = 171/320 (53.44%), Query Frame = 2
Query: 41 AVAAQPGDPGSSG----TSSLGGQYEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVP-QDLDMLRAKVLEELQVPHQRRVSLLEAEVERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRQLEEAEAVKSQLHAEMAAVRS--EREAAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKE 979
A AA P P S+G + + G +Y+ LL + L DLQ+TV + Q+L + D + ++ E L E+ + + L++ E ++++D++ E L+ KWK QLE + R E+LQ K P +DL+ LR K+ EEL+ P+Q+R+ L+ EVE+ RQM RR+ E K EYEQ++IDQG EME +H+ ++ + L+ +Q E S A + EE R L +Q E A+ L E +R + E K AH+ A R +TLE D KA R+ A+ + R + D +++L + E L+E
Sbjct: 4 AAAAPPVAPASAGGFSESGNAGSRYDALLRQIVQLNTDLQKTVALSQTLQRERDDAQQLNAKLKGEAKRLHERCDKMQLVLMQETEQKIESDRKHEELIAKWKKQLEVKARAFESLQKKFAPPRDLEQLRIKIQEELEGPYQQRIENLQDEVEQHRQMSFDMRREFEALKTEYEQFSIDQGNEMECIHETYEVTLNDLRRNLQLAEESAAHSQHTEELRRLEQQREAAQIEIKALREEXXXXXXXXQRVCEQSENDKS--AHELRLADEATRNATLELDIKACSRQLTRAKHECESIRSKWDHVQNKLLELASESEGLRE 321
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: A0A067CPA0_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPA0_SAPPC) HSP 1 Score: 125 bits (315), Expect = 2.630e-27 Identity = 103/311 (33.12%), Postives = 164/311 (52.73%), Query Frame = 2
Query: 95 GQYEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVP-QDLDMLRAKVLEELQVPHQRRVSLLEAEVERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRQLEEAEAVKSQLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVS---------TLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKEACAGKD 997
G+YE LL V L DL +TV + QSL ++ D L+ + ++ EL +K LL E +V +D++ E L+HKWK QLE + RE EALQ L P +DLD LR K+ +++++PH++RV L+ ++E+ R MF ARRD+E K E+EQ + G E+E+L H + LK +++ E D E R L ++ E +L AE+ +R+ + A L H SE+ AT + S LE + K+L R+ D ++ Q D+ +L+DA ++ ++ ++ KD
Sbjct: 13 GRYEYLLQQVVQLNTDLHKTVAMSQSLKAERDSLQELSDKLKHELQRAEDKCEKMHAILLNETEHKVASDRKHEQLMHKWKQQLEAKAREFEALQKSLAPPKDLDQLRMKIQDDIELPHRQRVQSLQMDIEKYRDMFFHARRDYEILKTEHEQILMQHGSELESLMATHTILTQDLKRKLEVAEEKADDMTMVERVRKLDQERETILLENQKLRAELEQLRTAKHA---------LFHASEAQATKLHASIAELTLARTNLELELKSLTRQNQRQTDDLEKSIIQRDELEKKLRDANDDAARARDQLKQKD 314
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: A0A7S3JYT2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYT2_9STRA) HSP 1 Score: 124 bits (312), Expect = 6.240e-27 Identity = 83/215 (38.60%), Postives = 130/215 (60.47%), Query Frame = 2
Query: 101 YEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKL-VPQDLDMLRAKVLEELQVPHQRRVSLLEAEVERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRQLE----EAEAVKSQL 730
Y L+ TV SLQ DLQ T+ C L + + Y+ R+E+ LRE TTR QL+EA ++++AD+ TE +V KWK QL+ RT ELE +QAKL PQDLDMLR ++ EEL++PHQ+++S +EA++E + + +++R+ ER KA+ EQ + Q + ++ + E + + ++ + E A D R R + E E EA+KS++
Sbjct: 19 YSTLMRTVESLQSDLQETIATCHELRQGKESAEKGYDTARSEVEKLREALRTTRSQLVEATTAKIEADRNTELVVTKWKSQLDERTSELETVQAKLGAPQDLDMLRIEIQEELEIPHQQKISDIEAQLEATQTAYFESKRELERYKAKSEQEIMLQSSAFQGEKERIQNEIEMYREQLNENEKRLAQISTDGPLREARNRAEALAVEIEALKSEI 233
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Match: T0PK38_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PK38_SAPDV) HSP 1 Score: 124 bits (310), Expect = 1.170e-26 Identity = 102/306 (33.33%), Postives = 171/306 (55.88%), Query Frame = 2
Query: 95 GQYEKLLATVGSLQGDLQRTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVP-QDLDMLRAKVLEELQVPHQRRVSLLEAEVERQRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRQLEEAEAVKSQLHAEMAAVRSERE----AAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKEACAGKD 997
G+YE LL V L DL +TV + QSL ++ D L+ + ++ EL +K + LL E +V +D++ E L+HKWK QLE + RE +ALQ L P +DLD LR K+ +E+++PH++RV L+ ++E+ R MF ARRD+E K E+EQ + G E+E+L H + LK +++ E D E R L ++ E +L E+ +R+ ++ ++E++ KL H S + AT R + LE + K+L R+ D ++ Q D+ + +L+DA ++ +++++ KD
Sbjct: 13 GRYEYLLQQVVQLNTDLHKTVAMSQSLKAERDGLQELSDKLKHELERAEDKCDKMHAILLNETEHKVASDRKHEQLMHKWKQQLEAKAREFDALQKSLAPPKDLDQLRMKIQDEVELPHRQRVQSLQMDIEKFRDMFFHARRDYEILKTEHEQILVQHGSELESLMATHTILTQDLKRKLEVAEEKAEDMTMVERVRKLDQERETILLENQKLRVELEHLRTAKQDLFHSSEVQATKL---HASIADATLARTN-LELELKSLTRQNQRQTDELEKCAVQRDELQKKLRDAHDDATRVRDQLKQKD 314 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig746.18646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig746.18646.1 >prot_Ecto-sp13_S_contig746.18646.1 ID=prot_Ecto-sp13_S_contig746.18646.1|Name=mRNA_Ecto-sp13_S_contig746.18646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=458bp MATATAVAAQPGDPGSSGTSSLGGQYEKLLATVGSLQGDLQRTVGVCQSLback to top mRNA from alignment at Ecto-sp13_S_contig746:14467..20924+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig746.18646.1 ID=mRNA_Ecto-sp13_S_contig746.18646.1|Name=mRNA_Ecto-sp13_S_contig746.18646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6458bp|location=Sequence derived from alignment at Ecto-sp13_S_contig746:14467..20924+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig746:14467..20924+ >mRNA_Ecto-sp13_S_contig746.18646.1 ID=mRNA_Ecto-sp13_S_contig746.18646.1|Name=mRNA_Ecto-sp13_S_contig746.18646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1374bp|location=Sequence derived from alignment at Ecto-sp13_S_contig746:14467..20924+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |