mRNA_Ecto-sp13_S_contig746.18645.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: D7FPE5_ECTSI (SET and MYND domain containing 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE5_ECTSI) HSP 1 Score: 880 bits (2275), Expect = 5.200e-316 Identity = 456/536 (85.07%), Postives = 468/536 (87.31%), Query Frame = 3
Query: 291 MVDLVDESASESSPPTKSFGDGDPTQYARRTANLDARVEVRFDPKRGRGLFALRDIPSGTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAGCKKSGTVGVLGGVHKSATRELTKELNTMCATSVGVDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCTHLFKTLVDTNISDEDVQAMYRRQAVVITRNAHTVSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCVAESSSPEGRPVVKQVLRSIRNICAGDELCYSYLSSGSAVGTVSERRELLMGWGFRCACARCQSEAEEEKRLRRQRTPTDERALKMLERLAQISALGQRPHAIWSSGQQTTVDEATLVTKHFYIRKILPHVFTRPTYCLVDSRKNALALREEAYMPDLQIIAEFYSREKGKRLSPMLQYRVAVLMMEVTALVGATNLFFRFMVCGFAADELSELRNAMAITCRQQQYMFATKVEVCDLGEAQVTKKLEGIRAVGKFARTDARQLHELYYGGQSK 1898
MVDLVDESASESSP T+S DGDPT+YARRTANLDARVEVRFDPKRGRGLFALRDIP+GTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCA CKK+ TVG + GVH SAT ELTKELNT+CATS G+DKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCT LFKTLVDTNISDEDVQAMYRR ITRNAHTVSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCV ESSSPEGRPVVKQVLRSIRNI AGDELCYSYLSSGSAVGTVSERR+LLMGWGFRCACARC SEAEEEKRLRRQRTP DERALKMLERLAQISALGQR +NA ALREEAYMPDLQ+IAEFYSREKGK LSPMLQYRVAVLMMEVTAL+GATNLFFRFMVCGFAADELSELRNAMAITCRQQQYMFATKVEVCDLGE Q TKKLEGIRAVGKFAR DAR+LHELYYGGQSK
Sbjct: 1 MVDLVDESASESSPETRSSSDGDPTRYARRTANLDARVEVRFDPKRGRGLFALRDIPAGTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAACKKATTVGGVSGVHNSATCELTKELNTICATSGGIDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCTRLFKTLVDTNISDEDVQAMYRR----ITRNAHTVSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCVTESSSPEGRPVVKQVLRSIRNIRAGDELCYSYLSSGSAVGTVSERRDLLMGWGFRCACARCLSEAEEEKRLRRQRTPIDERALKMLERLAQISALGQR--------------------------------------------ENAPALREEAYMPDLQLIAEFYSREKGKLLSPMLQYRVAVLMMEVTALIGATNLFFRFMVCGFAADELSELRNAMAITCRQQQYMFATKVEVCDLGETQATKKLEGIRAVGKFARNDARRLHELYYGGQSK 488
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: A0A397UIR2_9GLOM (Uncharacterized protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UIR2_9GLOM) HSP 1 Score: 80.5 bits (197), Expect = 5.030e-12 Identity = 79/319 (24.76%), Postives = 139/319 (43.57%), Query Frame = 3
Query: 402 VEVRFDPKRGRGLFALRDIPSGTEVMRVPAAAAVLLDRSRKGSCSGCL-LPTDTVGSLEACHGFPLSFC-AGCKKSGTVGVLGGVHKSATRELTKELNTMCATSVGVDKDSLR---LAADVFVRRKAGLFDDSEWGLLNSLESHDN-------EAHTMSLAPAELHKCTHLFKTLVDTNISDEDVQAMYRRQAVV----ITRNAHTVSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCVAESSSPEGRPVVKQVLRSIRNICAGDELCYSYLSSGSAVGTVSERRELLMGWGFRCACARCQSE------AEEEKRL 1292
+ + +P R L L+ IP G+ ++ P+ A + C+ CL +P + + + CH +C C+K + H + K+ S +D++ LR L + ++++K+ + ++E L L N +H P +L K FK++ SD D+Q + + + + + N + N P FG +G + G+L+NHSC PN + G Q+LRSI NI AG+E+ SY+ A+ S ++ L + F+C C RC S+ EEE+++
Sbjct: 13 LSLEENPTTYRALKTLKHIPKGSTIITSPSLACFPIPSMINVRCNNCLEIPIEPLKTCSRCH--KTFYCNVKCQK-----LAWSAHHKILCPIYKKEGNKTLDSDYMDEEMLRRIALRIEKYLKKKS--YHETETVSLTGLNEKVNCETFLTLMSHREKRTPEQLEK----FKSIAKNVFSDLDLQNITQDELITYLCRFSCNNFNLDDNQLFP-FG--EGTYSIGSLINHSCRPNAIMMYSIGQQTNSG----SQILRSIENIKAGEEITISYIDV--AMSRTSRQKLLNEKYFFKCQCPRCSSDNVSIDITEEERKV 309
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: A0A7S1AGI2_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AGI2_NOCSC) HSP 1 Score: 76.6 bits (187), Expect = 4.800e-11 Identity = 94/341 (27.57%), Postives = 139/341 (40.76%), Query Frame = 3
Query: 429 GRGLFALRDIPSGTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAGCKKSGTV-----GVLGGVHKSATRELTKE-LNTMCATSVGVDKDSLRLAADVFV------RRKAGLF-----DDSEWGLLNSLES---HDNEAHTMSLAPAELHKCTHLFKTLVDTNISD-------------------EDVQAMYRRQAVVITRNAHTVSPN-------TSKPG----FGSVQGLFPCGALVNHSCLPNTFFHCVAESSSPEGRPVVKQVLRSIRNICAGDELCYSYLSSGSAVGTVSERRE-LLMGWGFRCACARCQSEAEEEKRLRR 1298
GR A R++ +G V+R AA L DR CS C PTD V CH FC+ C KS G V + + T+ L +S G LRLA + R K L D EW + S + HD+ L+P L L + + +DV + R I+ NA T++P TS FG GL+P GA++NHSC P+ + + + ++ + LR +R G+EL +YL GTV++RR LL +GF C C+ C++E+ +K+++R
Sbjct: 16 GRCYLATRNVSAGETVLRCAPIAAALHDRDVPKRCSRCFAPTDGVPCT--CHAI---FCSTCAKSSDAKREHRGECMAVKLALSDRKTRNALGLKSKSSTGTATTFLRLAVRLLSVRARHSRSKPVLLLGDPDGDGEW--IPSADEDVIHDSWEDVEELSPETDEALEALLARLQKGRVEELEGGVNAVRLLSGSRRASWDDVFRLLCR----ISMNAMTLAPEAQVRRALTSSKSRWKDFGI--GLYPSGAMLNHSCFPSCLWFVRSGT-------LIVETLRVVRR---GEELTIAYLPVS---GTVTQRRRRLLHAFGFHCVCSHCEAESNLQKKVQR 330
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: A0A834Y2W5_9HYME (SET domain-containing protein n=2 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834Y2W5_9HYME) HSP 1 Score: 72.0 bits (175), Expect = 2.030e-9 Identity = 78/287 (27.18%), Postives = 113/287 (39.37%), Query Frame = 3
Query: 408 VRFDPKRGRGLFALRDIPSGTEVMR-VPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAG-CKKSGTVGVLGGVHKSATRELTKELNTMCATSVGVDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCTHLFKTLVDTNISDEDVQAMYRRQAVVITRNAHTVSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCVAESSSPEGRPVVKQVLRSIRNICAGDELCYSYLSSGSAVGTVSERRELLMGWGFRCACARC 1262
V++ GRGL A+RDI G + P C C T+ S + G P+ C+ C+ S H ++ + L C + S+ L V R L DD E LLN +E HD H + L K + I+++D + M + + T TV K S++GLFP GAL NHSC PNT + + + ++ R+I AG+EL +Y + T RR L+ F C C RC
Sbjct: 29 VKYSSLGGRGLHAIRDIKQGELIFTDKPLIIGPRCYNKYLPMCINCYKSDCTLFSCDNGCGLPI--CSNDCENSIK-------HINSECKYLNNLQVTCGSMW-----SMELLQTVVPIRALSLNDD-EKKLLNGMECHDGPGHGREIE---------LLKKNISNIINEDDEKYMKKVCRIFDTNAFETVLIIDGKTSI-SLRGLFPLGALQNHSCTPNTRHYFTNNNV---------MITKASRDIKAGEELTMTY--TDLLWDTSLRRRYLIASKHFECNCKRC 279
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: A0A1Y2D3F3_9FUNG (SET domain-containing protein (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2D3F3_9FUNG) HSP 1 Score: 69.7 bits (169), Expect = 1.240e-8 Identity = 83/304 (27.30%), Postives = 125/304 (41.12%), Query Frame = 3
Query: 426 RGRGLFALRDIPSGTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSF-----------CAGCKK-----SGTVGVLGGVHKSATRELTKELNTMCATSVGVDKDSLRLAADVFVRRK------AGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCTHLFKTLV--DTNISDEDVQAMYRRQAVVITRNAHTVSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCVAESSSPEGRPVVKQVLRSIRNICAGDELCYSYLSSGSAVGTVSERRELLMGWGFRCACARCQ 1265
+GR + A D+ +GT V+ A+A LL S C CL P + + A L CA C K S T + E+ ++L + A + VD +RL V V+R A + +++ L+ L SH LA E +C F + + I D+ ++ R I N+H + T G+FP A++NHSC PN F SS G K ++R++R + G+ELC SY+ R +LL F CAC+RC+
Sbjct: 7 KGRHVKAAADLVAGTNVVVETASALALLKHSTDELCLCCLRPLPSESTTRAGERINLLGGSSSSKTSAIKCARCIKQAFYCSDTCKNDDAKRHALECEVLRDLPGITAAA-NVDYTLMRLVLAVLVQRSMELSGAAAVRENTSADLVFDLLSHRKTCDPKWLACVE--ECAEDFAQHLPPELAIPVSDIVSLACR----INSNSHGIIDPTGNTNGEVGVGMFPLVAMLNHSCAPNCSF-----VSSTHG----KMIVRTLRPVKEGEELCVSYVDL--CTPRDERRGKLLETKHFWCACSRCE 292
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: A0A7S1HKR9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HKR9_HEMAN) HSP 1 Score: 66.2 bits (160), Expect = 7.940e-8 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 3
Query: 1014 GLFPCGALVNHSCLPNTFFHCVAESSSPEGRPVVKQVLRSIRNICAGDELCYSYLSSGSAVGTVSERRELLMGWGFRCACARC 1262
G++P GA++NHSC PN + + +QV+R+I + GDELC+SY+ + SA ER L + +GF+CAC RC
Sbjct: 235 GVYPLGAILNHSCAPNCVLYYEPRTH--------RQVIRAISAVREGDELCHSYIDAASATPQRLER--LSICYGFQCACQRC 307
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: UPI0005AC6280 (protein msta, isoform B-like n=1 Tax=Fopius arisanus TaxID=64838 RepID=UPI0005AC6280) HSP 1 Score: 66.6 bits (161), Expect = 1.120e-7 Identity = 77/292 (26.37%), Postives = 112/292 (38.36%), Query Frame = 3
Query: 429 GRGLFALRDIPSGTEV-MRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAGCKKSGTVGVLGGVHKSATRELTKELNTMCATSVGVDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCTHLFKTLVDTNISDEDVQAMYRRQAVVITRNAHTVSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCVAESSSPEGRPVVKQVLRS--IRNICA------GDELCYSYLSSGSAVGTVSERRELLMGWGFRCACARCQSEAE 1277
GRGLFA RDI G E+ + P + C C T+ + G P+ A C+ S H + K+ C + D L V R L DD + L+ +++ H+ E H + L K V I+ +D + M + V+ T T +P S++GL+P GA+ NHSC PNT + RS + +ICA +EL +YL+ T RR L+M F C C RC +E
Sbjct: 37 GRGLFAARDIIQGEEIAVDAPLILGPRCYKKYPPMCVNCYKTGITLFPCDRGCGLPICSDA-CENSKD-------HVERECDQLKKWRPTCGSMFSKD-----LLLSVLPVRSLALGDDDK-ELVMAMKGHEGELHGREIE---------LLKRNVGEEINRKDEEFMLKVCRVMDTNAMETGTPADESRTI-SLRGLYPLGAMQNHSCTPNT-----------------RHYFRSNDLMSICATVDIKKDEELTMTYLNP--LWDTYIRRRYLMMSKHFDCRCRRCSDPSE 285
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: A0A482R4M8_9EURY (SET domain-containing protein-lysine N-methyltransferase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A482R4M8_9EURY) HSP 1 Score: 65.5 bits (158), Expect = 3.420e-7 Identity = 90/340 (26.47%), Postives = 128/340 (37.65%), Query Frame = 3
Query: 402 VEVR-FDPKRGRGLFA------LRDIPSGTEVMRVPAAAAVLLDRSRKGSCSGCLL---PTDTVGSLEACHGFPLSFCAGCKKSGTVGV------------------LGGVHKSATRELTKELNTMCATSVGVDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTM----------SLAPAELHKCTHLFKTLVDTNISDEDVQAMYRRQAVVITRNAHTVSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCV---------------AESSSPEGRPVVKQVLRSIRNICAGDELCYSYLSSGSAVGTVSERRELLMGWGFRCACARC 1262
+EVR + GRG+FA R +P+GT ++ AA L S G C C+L P AC+ AG K G L + K T+ L K T ATSV ++ + + + V +A L + G + +E+H E+ + S P + + H +T N D M+ R A G+FP GAL+NHSC PN CV A+ P P+V QV R+ R + AG++LC+SY+ A R EL +GF C C C
Sbjct: 27 IEVRECEDGSGRGVFARATDAAARCMPAGTLILANAPAAVASLPTS--GYCDTCILQRAPNRCARCKVACYCSRACQLAGWKGEGHAAACTSTAALSHSLPHHALVKLKTIQKLMTKSLLKSAFT--ATSVKLETHGVYVPSWADVAAQATLPARAAVG--DDVEAHGAESDALLRVALENKWVSSEPGLVEEARHALRTFDCNNFMVVD-DLMHPRGA-----------------------GVFPAGALLNHSCAPN----CVPMYLPSTHPEVVALQAKDMPPLVAPLV-QVFRTTRAVSAGEQLCHSYVEL--AATQQQRRHELQDAYGFTCCCTVC 329
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: A0A835YND3_9STRA (SET domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YND3_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 3.560e-7 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 3
Query: 951 ITRNAHTVSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCVAESSSPEGRPVVKQVLRSIRNICAGDELCYSYLSSGSAVGTVSERRELLMG-WGFRCACARC 1262
I NAH + + S G GLFP +++NHSC+PN C + + PV+ R++RNI AG+ELCYSY+ T ++RR +L + F C C RC
Sbjct: 115 IQSNAHAMVDDRSSSIRGL--GLFPLASMLNHSCIPNVAL-CFSFGTE-HNVPVL--TFRALRNISAGEELCYSYVD---LYQTTAQRRHMLQAAYHFTCGCVRC 210
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Match: A0A835T5G6_CHLIN (SET domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T5G6_CHLIN) HSP 1 Score: 65.1 bits (157), Expect = 5.070e-7 Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 3
Query: 1014 GLFPCGALVNHSCLPNTFFHCVAESSSPEGRPVVKQVLRSIRNICAGDELCYSYLSSGSAVGTVSERRELLMGWGFRCACARCQSE 1271
GL+ AL+NHSC P +CV + V+R++R I AG+E+C SYL A RR LL +GF CAC+RC+ E
Sbjct: 377 GLWTEHALINHSCAPAVCQYCVGRT----------MVVRAVRRIRAGEEVCDSYLGPELAAPLQVRRRALLAQYGFTCACSRCRLE 452 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig746.18645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig746.18645.1 >prot_Ecto-sp13_S_contig746.18645.1 ID=prot_Ecto-sp13_S_contig746.18645.1|Name=mRNA_Ecto-sp13_S_contig746.18645.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=607bp MPSFHEGCLVLYRSTGLLYRVVRWDQETELLQLAPAASRPNNGKSSRNAAback to top mRNA from alignment at Ecto-sp13_S_contig746:10066..14303- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig746.18645.1 ID=mRNA_Ecto-sp13_S_contig746.18645.1|Name=mRNA_Ecto-sp13_S_contig746.18645.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4238bp|location=Sequence derived from alignment at Ecto-sp13_S_contig746:10066..14303- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig746:10066..14303- >mRNA_Ecto-sp13_S_contig746.18645.1 ID=mRNA_Ecto-sp13_S_contig746.18645.1|Name=mRNA_Ecto-sp13_S_contig746.18645.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1821bp|location=Sequence derived from alignment at Ecto-sp13_S_contig746:10066..14303- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |