prot_Ecto-sp13_S_contig7452.18638.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7452.18638.1
Unique Nameprot_Ecto-sp13_S_contig7452.18638.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length236
Homology
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: D7G481_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G481_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 1.740e-143
Identity = 207/230 (90.00%), Postives = 216/230 (93.91%), Query Frame = 0
Query:    1 MCDPLLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGIDGLALAGVERVLADARCLCTLTIRHCGLARLPRLHSGSIEVLDLSNNAIESAAGLETLFRLKELDLAGNRIRTLSGLRPLVPLGTGRLQDLNLESNPVQNTPRYRESVLAVFPSIQLLDGIAKSQNWRMRTATMTNTVREEGHNRRACSTSPRVRNAFAEGYFSHVATGNSTKAGLAEFSKCGWETQTSQ 230
            MCDPLLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGIDGL LAGVERVLADARCLCTLTIRHC LARLPRL SGSIEVLD+SNNAIESAAGLETLFRLKEL+LAGNRIRTLSGLRPLVPLGTGRL++LNL+SNPVQNTPRYRESVLAVFPSIQLLDGIAKSQ WRMRTAT TNTV EEGH+RRACST PRVRNAF+EGYFS  AT NS +AGLAE+S CG ET TSQ
Sbjct:    1 MCDPLLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGIDGLTLAGVERVLADARCLCTLTIRHCRLARLPRLQSGSIEVLDISNNAIESAAGLETLFRLKELNLAGNRIRTLSGLRPLVPLGTGRLRELNLDSNPVQNTPRYRESVLAVFPSIQLLDGIAKSQKWRMRTATKTNTVGEEGHDRRACSTPPRVRNAFSEGYFSDGATWNSRRAGLAEYSTCGSETHTSQ 230          
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: A0A6H5KR55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR55_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 1.780e-138
Identity = 203/235 (86.38%), Postives = 215/235 (91.49%), Query Frame = 0
Query:    1 MCDPLLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGIDGLALAGVERVLADARCLCTLTIRHCGLARLPRLHSGSIEVLDLSNNAIESAAGLETLFRLKELDLAGNRIRTLSGLRPLVPLGTGRLQDLNLESNPVQNTPRYRESVLAVFPSIQLLDGIAKSQNWRMRTATMTNTVREEGHNRRACSTSPRVRNAFAEGYFSHVATGNSTKAGLAEFSKCGWETQTSQVGYVM 235
            MCD LLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHG DGLALAG+ERVLADARCLCTLTIR CGLARLPRL SGSIEVLD SNNAIESAAGLETLFRL+EL+LAGNRIRTLS LRPL+PLGTGRL++LNLE+NPVQ++PRYRESVLAVFPSIQLLDGIAKSQ WRMRTAT  N   EEGHNRRACST PRVRNAFAEGYFS  AT NS +AGL E+SKCG E QTSQVG+VM
Sbjct:   85 MCDLLLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGTDGLALAGIERVLADARCLCTLTIRDCGLARLPRLQSGSIEVLDFSNNAIESAAGLETLFRLQELNLAGNRIRTLSDLRPLLPLGTGRLRELNLENNPVQDSPRYRESVLAVFPSIQLLDGIAKSQKWRMRTATKPNMAGEEGHNRRACSTPPRVRNAFAEGYFSDGATWNSRRAGLKEYSKCGSEAQTSQVGHVM 319          
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: A0A482RN05_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RN05_9ARCH)

HSP 1 Score: 57.8 bits (138), Expect = 9.550e-7
Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 0
Query:   78 SIEVLDLSNNAIESAAGLETLFRLKELDLAGNRIR---TLSGLRPLVPLGTGRLQDLNLESNPVQNTPRYRESVLAVFPSIQLLDGIAKSQNWRMRTATMTNTVREEGH 183
            +I  L +SNNA+ S  G+E    L  L ++ N IR    L+GLR L       L+ L+L+ NPV   P YR+ V+ + P++++LDG+  S    +R   M N  + + H
Sbjct:   45 AIRSLLVSNNALTSVEGVEQFANLDTLSVSNNLIRYMEDLAGLRSL-----SHLKKLSLQGNPVAKLPFYRDFVITLCPTLEVLDGLRISDG--LRAVCMVNMRQVQVH 146          
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: A0A074ZR27_9TREM (Uncharacterized protein n=2 Tax=Opisthorchiidae TaxID=6196 RepID=A0A074ZR27_9TREM)

HSP 1 Score: 59.3 bits (142), Expect = 1.630e-6
Identity = 40/111 (36.04%), Postives = 57/111 (51.35%), Query Frame = 0
Query:   58 LCTLTIRHCGLARLPRLHSGSIEVLDLSNNAIESAAGLETLFRLKELDLAGNRIRTLSGLRPLVPLGTGRLQDLNLESNPVQNTPRYRESVLAVFPSIQLLDGIAKSQNWR 168
            L  L I HC L  LP L +  ++ LDLS+N + +   L +L RLK L++  N +  L      +     +LQDLNL+ NP +     R  V A  PSI+ +DG   + N R
Sbjct:  699 LTVLFINHCRLRVLPTLANLPLQSLDLSHNLLPTLTNLNSLPRLKVLNVNYNILTNLFQDVITISNSCTKLQDLNLQFNPWKVPTEVRLFVAAYLPSIETIDGYLVTANDR 809          
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: A0A2D4BFH3_PYTIN (Protein phosphatase 1 regulatory subunit 7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFH3_PYTIN)

HSP 1 Score: 57.8 bits (138), Expect = 5.420e-6
Identity = 47/131 (35.88%), Postives = 66/131 (50.38%), Query Frame = 0
Query:   54 DARCLCTLTIRHCGLARLPRLHS--GSIEVLDLSNNAIESA-AGLETLFRLKELDLAGNRIRTLSGLRPLVPLGT-----------------GR-----LQDLNLESNPVQNTPRYRESVLAVFPSIQLLD 159
            ++R L  L +   GL  +P L S  G +EVL LSNN + +  + L+ L RLK LD+A N++  L  L  L+ L +                 GR     L+ ++L SNPV  T RYR+ VL   P +Q LD
Sbjct:  849 ESRRLVCLDLSGLGLECVPDLSSLRGHLEVLLLSNNKLHTMESSLKELVRLKRLDVASNQLSRLGDLETLMTLTSVDASCNKLASLEDILSFGRCRGSVLKSIDLRSNPVCFTKRYRQLVLRHMPGLQELD 979          
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: A0A3R7D324_CLOSI (Poly(A)-specific ribonuclease (Fragment) n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=A0A3R7D324_CLOSI)

HSP 1 Score: 57.8 bits (138), Expect = 5.600e-6
Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = 0
Query:   58 LCTLTIRHCGLARLPRLHSGSIEVLDLSNNAIESAAGLETLFRLKELDLAGNRIRTLSGLRPLVPLGTGRLQDLNLESNPVQNTPRYRESVLAVFPSIQLLDGIAKSQNWR 168
            L  L+I HC L  LP L +  ++ LDLS+N + +   L +L RLK L++  N +  L      +     +LQDLNL+ NP +        V A  PSI+ +DG     N R
Sbjct: 1808 LTVLSINHCRLRVLPALANLPLQSLDLSHNLLPTLTNLNSLPRLKVLNVNYNMLTNLFLDVITISNSCTKLQDLNLQFNPWKALTEVHLFVAAYLPSIKTVDGYLVPDNDR 1918          
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: A0A4S2MFB7_OPIFE (Uncharacterized protein n=1 Tax=Opisthorchis felineus TaxID=147828 RepID=A0A4S2MFB7_OPIFE)

HSP 1 Score: 57.4 bits (137), Expect = 7.210e-6
Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 0
Query:   58 LCTLTIRHCGLARLPRLHSGSIEVLDLSNNAIESAAGLETLFRLKELDLAGNRIRTLSGLRPLVPLGTGRLQDLNLESNPVQNTPRYRESVLAVFPSIQLLDGIAKSQNWRMRTATMTNTVRE 180
            L  L+I HC L  LP L +  ++ LDLS+N + +   L +L RLK L++  N +         +     +L+DLNL+ NP +     R  V A  PSI  +DG     N R+    +++  R+
Sbjct:  703 LTILSINHCRLRVLPTLANLPLQSLDLSHNLLPTLTNLNSLPRLKVLNVNYNMLTNAFPDVIAISNACTKLRDLNLQFNPWKAPTEVRLFVAAYVPSINTIDGYMVPDNDRVCAGNISHQRRD 825          
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: A0A8C4RWA0_ERPCA (Protein phosphatase 1 regulatory subunit 42 n=4 Tax=Polypteridae TaxID=8289 RepID=A0A8C4RWA0_ERPCA)

HSP 1 Score: 56.2 bits (134), Expect = 1.010e-5
Identity = 33/97 (34.02%), Postives = 57/97 (58.76%), Query Frame = 0
Query:   74 LHSGS--IEVLDLSNNAIESAAGLETLFRLKELDLAGNRIRTLSGLRPLVPLGTGRLQDLNLESNPVQNTPRYRESVLAVFPSIQLLDGIAKSQNWR 168
            LHS S  + VL++SNNAI+    L  L  L +   A N+++ +  L  +    T +LQ L+L  NPV + P+YR+ ++ +  S+++LDG   ++ +R
Sbjct:  141 LHSLSTYLSVLNISNNAIDEITELSVLHNLTQFYAANNKLQDVKELELVFSKWT-KLQKLDLSGNPVCHKPKYRDHLIMICKSLEVLDGKEINETFR 236          
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: A0A0L0SBP9_ALLM3 (Uncharacterized protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SBP9_ALLM3)

HSP 1 Score: 54.7 bits (130), Expect = 5.490e-5
Identity = 50/160 (31.25%), Postives = 75/160 (46.88%), Query Frame = 0
Query:    5 LLWSLTFRQCQLESLLPVAGLLHHLDGLIGLG-IHGIDGLALAGVERVLADARCLCTLTIRHCGLARLPRLHSGSIEVLDLSNNAIESAAGLETLFRLKELDLAGNRIRTLSGLRPLVPLGTGRLQDLNLESNP-VQNTPRYRESVLAVFPSIQLLDGIA 162
            L+ SL+ R CQL ++ P+A L H  +  IG   +  ID LA   +  + A    +  + +     A+L  L+        LS+N + S   + TL R+ EL LA N +     +  L  L    L  L+L  N  +   P YR  V+   P IQ+LDG+A
Sbjct:  576 LVTSLSLRNCQLTTVSPLADLAHLEELFIGGNRLTRIDDLAHLPLRVLDASCNAITAVDVPARAFAKLTHLN--------LSSNRLTSLDMVRTLPRVTELYLAHNHVTDSGHMNALAVLPA--LHVLDLTGNAFIGAVPHYRAYVIYCVPLIQVLDGVA 725          
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Match: A0A7J8B4M3_PIPKU (Rab geranylgeranyltransferase subunit alpha n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J8B4M3_PIPKU)

HSP 1 Score: 52.4 bits (124), Expect = 6.330e-5
Identity = 35/97 (36.08%), Postives = 52/97 (53.61%), Query Frame = 0
Query:   61 LTIRHCGLARLPRLHSG--SIEVLDLSNNAIESAAGLETLFRLKELDLAGNRIRTLSGLRPLVPLGTGRLQDLNLESNPVQNTPRYRESVLAVFPSI 155
            L + H  L  LP   +    +EVL  S+NAIES  G+  L RL+EL L  NR++  + L+P+      +L  LNL+ NP+  T    E +  + PS+
Sbjct:   67 LDLSHNRLRALPPALAALRCLEVLQASDNAIESLGGVTNLPRLQELSLCNNRLQQPAALQPVA--SCPKLVLLNLQGNPLCQTAGTSEHLAELLPSV 161          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7452.18638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G481_ECTSI1.740e-14390.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KR55_9PHAE1.780e-13886.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482RN05_9ARCH9.550e-734.86Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A074ZR27_9TREM1.630e-636.04Uncharacterized protein n=2 Tax=Opisthorchiidae Ta... [more]
A0A2D4BFH3_PYTIN5.420e-635.88Protein phosphatase 1 regulatory subunit 7 n=1 Tax... [more]
A0A3R7D324_CLOSI5.600e-635.14Poly(A)-specific ribonuclease (Fragment) n=1 Tax=C... [more]
A0A4S2MFB7_OPIFE7.210e-631.71Uncharacterized protein n=1 Tax=Opisthorchis felin... [more]
A0A8C4RWA0_ERPCA1.010e-534.02Protein phosphatase 1 regulatory subunit 42 n=4 Ta... [more]
A0A0L0SBP9_ALLM35.490e-531.25Uncharacterized protein n=2 Tax=Allomyces macrogyn... [more]
A0A7J8B4M3_PIPKU6.330e-536.08Rab geranylgeranyltransferase subunit alpha n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14580LRR_9coord: 79..160
e-value: 3.9E-8
score: 33.0
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 27..173
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 48..166
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 43..171
e-value: 2.6E-23
score: 84.0
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 78..99
score: 7.774
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 100..121
score: 8.836
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 127..148
score: 5.486

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7452contigEcto-sp13_S_contig7452:3549..4888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7452.18638.1mRNA_Ecto-sp13_S_contig7452.18638.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7452 3549..4888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7452.18638.1 ID=prot_Ecto-sp13_S_contig7452.18638.1|Name=mRNA_Ecto-sp13_S_contig7452.18638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
MCDPLLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGIDGLALAGVER
VLADARCLCTLTIRHCGLARLPRLHSGSIEVLDLSNNAIESAAGLETLFR
LKELDLAGNRIRTLSGLRPLVPLGTGRLQDLNLESNPVQNTPRYRESVLA
VFPSIQLLDGIAKSQNWRMRTATMTNTVREEGHNRRACSTSPRVRNAFAE
GYFSHVATGNSTKAGLAEFSKCGWETQTSQVGYVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt