mRNA_Ecto-sp13_S_contig7446.18629.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: D7FIZ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ4_ECTSI) HSP 1 Score: 565 bits (1456), Expect = 9.680e-202 Identity = 295/300 (98.33%), Postives = 299/300 (99.67%), Query Frame = 1
Query: 1 MKSALATMAVSATAASIASAFVGSPLPLRALTSKPSCSTSAYRARPTRMTAEDDEVEPKVYYASEVTDGNKKTTFNREMGEQPLPENTATTRSDRYGPADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDMKAKVKASTMVQESKARQRNAWGGGSTGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTIEDNTSKWKRGGRSSYFDNINAAPEEAVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVEDTVQCISTSGRPGHA 900
MKSALATMAVSATAAS ASAFVGSPLPLRALTS+PSCSTSAYRARPTRMTAEDDEVEPKVYYASEVTDGNKKTTFNREMGEQPLPENTATTRSDRYGPADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDM+AKVKASTMVQESKARQRNAWGGGS+GYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGT+EDNTSKWKRGGRSSYFDNINAAPEEAVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVEDTVQCISTSGRPGHA
Sbjct: 1 MKSALATMAVSATAASFASAFVGSPLPLRALTSRPSCSTSAYRARPTRMTAEDDEVEPKVYYASEVTDGNKKTTFNREMGEQPLPENTATTRSDRYGPADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDMRAKVKASTMVQESKARQRNAWGGGSSGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTVEDNTSKWKRGGRSSYFDNINAAPEEAVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVEDTVQCISTSGRPGHA 300
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: A0A835YTJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ3_9STRA) HSP 1 Score: 191 bits (486), Expect = 3.950e-55 Identity = 121/248 (48.79%), Postives = 155/248 (62.50%), Query Frame = 1
Query: 169 EPKVYYASEVTDGNKKTTFNREMGEQPLP--ENTATTRSDRYGPADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDMKAKVKASTMVQESKARQRNAWGGGSTGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTIEDNTSKWKRGGRSSYFDNINA-APEEAVDQSWNKYSAPVASGMK-DGTEWGETTLTGNEKVEDTVQCISTSGRPGHA 900
E +V+ SE+T+GN F E ++ + E+T T GP Y G VD + FDGGDGQVG VGDG NA+++FD +V VK +TMV+ESKARQ NAWG STGYA+ LKE+GM GED+ VRRQQ EN+RNQQE+ QRA ++A+TG E+N WKRG SY DN++ AP E + +WN++ P A+ K DGT W LTG EK+ TVQCIS+SGRPG+A
Sbjct: 48 EGEVFVVSEITEGNVPNKFQEEFMDKGVATTEDTWTAGDANAGPQTYTGLVDGDTFDGGDGQVGCVGDGDNALDKFDSRSV---------VKGATMVKESKARQMNAWGS-STGYAESLKEKGMQKI-INGEDMLAVRRQQLENWRNQQELQASQRAKIQQLDAITGQ---ENNPVGWKRGASRSYMDNLSGGAPAE--ESAWNEFKPPTAADAKSDGTSWDHVKLTGKEKITATVQCISSSGRPGYA 279
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: A0A7S2UY32_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY32_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.170e-30 Identity = 85/170 (50.00%), Postives = 104/170 (61.18%), Query Frame = 1
Query: 274 RSDRYGPADYEGFVDS--EGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDMKAKVKASTMVQESKARQRNAWGGGSTGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTIEDNTSKWKRGGRSSYFDNINAAPEEAVDQSWNKY 777
+++ +GP DY GF D FDGGDGQVGVVGDG N ME+FD+S V +KAS++V+ESK RQRNAWG STGYA++LK+QGM N GED KVRRQQ EN+ NQQE+ R Q A M AM G N K YF + A EE +++WN Y
Sbjct: 134 QTNNHGPVDYRGFSDKGDSDFDGGDGQVGVVGDGKNNMEEFDRSQV---------IKASSIVKESKQRQRNAWGT-STGYAEKLKDQGMTKINKYGEDEMKVRRQQLENWSNQQELKRAQNAVVREMAAMEGIDPALANQRSSK-----DYFGGFSKAQEE--EEAWNVY 286
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: A0A8J2WTM2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTM2_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.860e-25 Identity = 82/199 (41.21%), Postives = 117/199 (58.79%), Query Frame = 1
Query: 178 VYYASEVTDGNKKTTF----NREMGEQPLPENTATTRSD-RYGPADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDMKAKVKASTMV-QESKARQRNAWGGGSTGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTIEDNTSKWKRGGRSSYFDNINAAPEEAV 756
V Y SEV D +KK + + + E ++T +D YGP +YEGF+D++GFDGGDGQVGVVGDG N ME+FD SA ++ +K K + M +ESK +NAWG +TGYADEL ++GMV + GED RRQQ EN+RNQ+E+ R + D+ + E + G +++ SY + P++ V
Sbjct: 35 VSYLSEVEDADKKKKWWDQDDPDREESNPRDHTGIGEADSNYGPTNYEGFIDADGFDGGDGQVGVVGDGKNHMEEFDMSAED-SRGLKGGRKLNQMGGRESKLNAKNAWGT-TTGYADELAKRGMVEIDEYGEDKLARRRQQLENWRNQEEL--RMKKDHQMAELASLQGK------EYRHFNHGSYLQQFDNGPKDEV 223
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: A0A7S3NIJ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIJ0_9STRA) HSP 1 Score: 108 bits (270), Expect = 8.990e-24 Identity = 82/189 (43.39%), Postives = 110/189 (58.20%), Query Frame = 1
Query: 292 PADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDMKAKVKASTMV-QESKARQRNAWGGGSTGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTIEDNTSKWKRGGRSSYFDNINAAPEEAVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVE 855
P +Y+GF+DS+GFDGGDGQVGVVGDG NAME FD S Q +K+ ++++ + ESK Q+ AWG STGYAD+L ++GMV + GED K RRQQ EN++NQ EI +++A + + + G GG SYFD I A PE K +AP S GT + E T + +E
Sbjct: 75 PENYDGFIDSDGFDGGDGQVGVVGDGTNAMETFDTS-----QSVKSNLRSNAIGGTESKQTQKVAWGY-STGYADDLAKKGMVDIDEYGEDRLKARRQQLENWQNQNEIRAQKQAQMNELAQLQGKSLSS--------GGAQSYFDVI-AGPE--------KKAAPAPSTT--GTIYLEPKATSDGHIE 238
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: A0A7S2AVT2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AVT2_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.320e-21 Identity = 90/249 (36.14%), Postives = 122/249 (49.00%), Query Frame = 1
Query: 166 VEPKVYYASEVTDGNKKTTFNR-EMGEQPLP----ENTATTRSDRYGPADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDMKAKVKASTMV-QESKARQRNAWGGGSTGYADELKE-QGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTIEDNTSKWKRGGRSSYFDNINAAPEEAVDQSWNKYSAPVASGMKDGTEWGETTLTGNEKVEDTVQCISTSGRP 891
++ +V Y SE+ D +KK E GE+P E + P +Y+ F+D +GFDGGDGQVGVVG NAME FD S + + +V + + ESK Q+N +G STGYA+EL E + MV + GED RRQQYEN+RNQ+E+ N +ME G R G SSYF+ +NA + + WN G KD T + G K + T T+ P
Sbjct: 39 IKTQVSYLSELEDDDKKKEREAAEGGEKPYEKYEREQYGVPQKGALQPENYDSFIDDDGFDGGDGQVGVVGSEDNAMETFDMSQAVGTSNARGRVFDNAIGGTESKMTQKNVFGR-STGYAEELAENEDMVDIDEYGEDRLSARRQQYENWRNQRELK-----GNQIMELEDLAGVTGQKYDP--RSGSSSYFEALNAGTNQDTKE-WNMI------GGKDATTFSTEAAVGLSKGDITAVIEMTANFP 272
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: A0A7S1U0C9_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0C9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.620e-19 Identity = 79/170 (46.47%), Postives = 102/170 (60.00%), Query Frame = 1
Query: 271 TRSDRYGPA-DYEGFVD-SEGFDGGDGQVGVVGDGGNAMEQFDQS----------AVGRAQDMKA----KVKASTMVQESKARQRNAWGGGSTGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTIEDNTSKWKRGGRSSYFDNI 732
T SD G A + + FVD +EGFDGGDGQVGVVGDG NAME FD+S V A+D+K +++ S +V +SK+ Q ++G TGYA+ELK +GM S GED KVRRQQ EN+ QQ + QR M+A+TG E +K KRGG YFD++
Sbjct: 100 TESDAQGAASNMDAFVDFAEGFDGGDGQVGVVGDGSNAMETFDRSEVVSGDSSRNTVMMAKDLKQSASERLERSKLVADSKSTQILSFGAEGTGYAEELKAKGM-SKMKDGEDQLKVRRQQLENWHQQQGLRSAQRQRLDDMDALTGG---EAYAAK-KRGGSRGYFDDL 264
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: L1IQJ4_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IQJ4_GUITC) HSP 1 Score: 83.2 bits (204), Expect = 1.880e-14 Identity = 61/139 (43.88%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 298 DYEGFVDSEGFDGGDGQVGVVGDGGNAMEQF-DQSAVGRAQDMKAKVKASTMVQESKARQR-NAWGGGSTGYA--DELKEQGMVSYNA-AGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTIEDNTSKWK 699
DY+GF+D EGFDGGDGQVGVVGDG NAME+F D+ + + + K + ++ +R NAWG ST + D+LK GMV + GED +V+RQQYEN+ NQQ+ + +R MEA+ G + +T +K
Sbjct: 77 DYKGFIDGEGFDGGDGQVGVVGDGKNAMEEFEDRMVIDNSIGGAGRGKVAGGSSGNRIDKRWNAWGADSTDNSVKDQLKADGMVDIDIFTGEDKKQVQRQQYENWFNQQKQWQAERKLRDQMEALNN-GKRQKDTDDYK 214
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: A0A1E7FB47_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB47_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 7.610e-13 Identity = 50/131 (38.17%), Postives = 74/131 (56.49%), Query Frame = 1
Query: 289 GPADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRAQDMKAKVKASTMVQESKARQRNAWGGGSTGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITRRQRADNSVMEAMTGTGTIED 681
GP D++ +V+ + FDGGDGQ+GV GDG +++FD S + +++ M AK NAWG +TGYAD L EQG+ D S+ QQ EN+ NQQE+ ++++A S+ E + ED
Sbjct: 39 GPGDWDSYVEFDEFDGGDGQMGVAGDGNKGLDKFDMSTIAKSKSMSAK---------------NAWGT-NTGYADTLIEQGV--------DTSRA--QQLENWHNQQEVLQKRKAQRSLTEDFDSVDSTED 143
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Match: A0A7S1BSJ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSJ0_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.960e-11 Identity = 52/130 (40.00%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 241 EQPLPENTATTRS--DRYGPADYEGFVDSEGFDGGDGQVGVVGDGGNAMEQFDQSAVGRA-QDMKAKVKASTMVQESKARQRNAWGGGSTGYADELKEQGMVSYNAAGEDISKVRRQQYENYRNQQEITR 621
E+ L EN + DRYGP + FV+ + +DGGDGQ G VGDG +EQ Q + A+VK ++ + + NAWG STGYAD+L+EQG+ + R QQ ENY NQQE+ +
Sbjct: 93 EEELAENNQMAKDEIDRYGPGNLNDFVEFDEYDGGDGQTGCVGDGKGKLEQIGSDTQATIIQPVSARVKTTSRERSA----TNAWGT-STGYADQLREQGVET----------ARAQQLENYANQQELNK 207 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7446.18629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7446.18629.1 >prot_Ecto-sp13_S_contig7446.18629.1 ID=prot_Ecto-sp13_S_contig7446.18629.1|Name=mRNA_Ecto-sp13_S_contig7446.18629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp MKSALATMAVSATAASIASAFVGSPLPLRALTSKPSCSTSAYRARPTRMTback to top mRNA from alignment at Ecto-sp13_S_contig7446:2934..7498+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7446.18629.1 ID=mRNA_Ecto-sp13_S_contig7446.18629.1|Name=mRNA_Ecto-sp13_S_contig7446.18629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4565bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7446:2934..7498+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7446:2934..7498+ >mRNA_Ecto-sp13_S_contig7446.18629.1 ID=mRNA_Ecto-sp13_S_contig7446.18629.1|Name=mRNA_Ecto-sp13_S_contig7446.18629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7446:2934..7498+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |