prot_Ecto-sp13_S_contig74411.18624.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig74411.18624.1
Unique Nameprot_Ecto-sp13_S_contig74411.18624.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: D7FNF5_ECTSI (Possible ferredoxin (2Fe-2S) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNF5_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 1.130e-31
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    1 TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            TCIVAIDEGLESTTIRS+DESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGA QWTR
Sbjct:  276 TCIVAIDEGLESTTIRSVDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGAAQWTR 333          
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: A0A835Z6S1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.450e-20
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    1 TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            TCIV +    ++ TI+S+DE STLR NPP+YRLSCVTN+Y D+TV +FPP+G DQWTR
Sbjct:  235 TCIVDVAGASDACTIKSVDERSTLRSNPPSYRLSCVTNVYKDITVQIFPPIGRDQWTR 292          
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: A0A6S9LXT1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LXT1_HETAK)

HSP 1 Score: 87.4 bits (215), Expect = 2.430e-19
Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    1 TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            TCIV + EG ++T+ R IDE+STLRDNPP YRLSCVTNM+ D+TV  +P +GA QWTR
Sbjct:  234 TCIVNVAEGFDNTSRRGIDEASTLRDNPPTYRLSCVTNMHGDLTVETYPEIGAYQWTR 291          
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: A0A7S2XYE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYE9_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.300e-19
Identity = 36/58 (62.07%), Postives = 48/58 (82.76%), Query Frame = 0
Query:    1 TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            TCIV + EGL + T++S+DE++ LR+NPP+YRLSCVT++Y D TV +FP VGA QWTR
Sbjct:  252 TCIVEVTEGLNNLTLKSVDEATVLRENPPSYRLSCVTDIYGDATVKIFPAVGAAQWTR 309          
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: A0A7S3TKK5_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TKK5_9SPIT)

HSP 1 Score: 83.2 bits (204), Expect = 4.720e-18
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    1 TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            TCIV + EG+E  T RS+DE+STLR+NP  Y+L+C+TN+Y DVTV + P VGA QWTR
Sbjct:  185 TCIVDVVEGIEGCTRRSLDEASTLRENPETYKLACITNLYGDVTVKLMPKVGAAQWTR 242          
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: A0A8J5X6J6_DIALT (PDZ domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X6J6_DIALT)

HSP 1 Score: 81.6 bits (200), Expect = 2.650e-17
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    2 CIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            CIV +  GL++ + RSIDESSTLR+NPP+YRLSC+T ++ D+TV V  PVGA QWTR
Sbjct:  210 CIVDVTAGLDACSRRSIDESSTLRENPPSYRLSCITQVHGDITVAVQTPVGAAQWTR 266          
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: A0A7S2A528_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A528_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.150e-17
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            TCIV + EG  +T  +S+DE+STLR+NP  YRLSCVT  YDDVTV  FPP+ A QWTR
Sbjct:  186 TCIVNVKEGGMNTNRKSMDEASTLRENPDTYRLSCVTFAYDDVTVETFPPIKAAQWTR 243          
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: K0RAN8_THAOC (2Fe-2S ferredoxin-type domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAN8_THAOC)

HSP 1 Score: 80.5 bits (197), Expect = 7.350e-17
Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            TCIV + EG   T  +SIDESSTLR+NP +YRLSCVT  Y DVTV  FPP+ A QWTR
Sbjct:  210 TCIVNVKEGGADTNRKSIDESSTLRENPESYRLSCVTFAYGDVTVETFPPIKAAQWTR 267          
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: A0A1Z5KR35_FISSO (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR35_FISSO)

HSP 1 Score: 79.3 bits (194), Expect = 2.990e-16
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            TCIV I +G   T  +S+DE+STLR+NP +YRLSCVT  YDD+TV  FPP+ A QWTR
Sbjct:  243 TCIVNITKGSLGTNRKSMDEASTLRENPDSYRLSCVTFAYDDITVETFPPIKAAQWTR 300          
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Match: A0A7S1GJ01_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJ01_CYCTE)

HSP 1 Score: 76.3 bits (186), Expect = 4.160e-16
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPPVGADQWTR 58
            TCIV I EG   T  +S+DE+STLR+NP +YRLSCVT  Y DVTV  FPPV   QWTR
Sbjct:   99 TCIVNIKEGGLLTNRKSMDEASTLRENPDSYRLSCVTFAYGDVTVETFPPVNPAQWTR 156          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig74411.18624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FNF5_ECTSI1.130e-3196.55Possible ferredoxin (2Fe-2S) n=2 Tax=Ectocarpus Ta... [more]
A0A835Z6S1_9STRA6.450e-2063.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9LXT1_HETAK2.430e-1965.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XYE9_9STRA4.300e-1962.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3TKK5_9SPIT4.720e-1862.07Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A8J5X6J6_DIALT2.650e-1763.16PDZ domain-containing protein n=2 Tax=Diacronema l... [more]
A0A7S2A528_9STRA5.150e-1763.79Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0RAN8_THAOC7.350e-1765.522Fe-2S ferredoxin-type domain-containing protein (... [more]
A0A1Z5KR35_FISSO2.990e-1662.072Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S1GJ01_CYCTE4.160e-1663.79Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 1..54
e-value: 2.7E-5
score: 25.8
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig74411contigEcto-sp13_S_contig74411:473..649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig74411.18624.1mRNA_Ecto-sp13_S_contig74411.18624.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig74411 473..649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig74411.18624.1 ID=prot_Ecto-sp13_S_contig74411.18624.1|Name=mRNA_Ecto-sp13_S_contig74411.18624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
TCIVAIDEGLESTTIRSIDESSTLRDNPPNYRLSCVTNMYDDVTVTVFPP
VGADQWTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0360102Fe-2S_ferredoxin-like_sf