mRNA_Ecto-sp13_S_contig7438.18617.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7438.18617.1
Unique NamemRNA_Ecto-sp13_S_contig7438.18617.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: D7FQZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ0_ECTSI)

HSP 1 Score: 896 bits (2316), Expect = 1.050e-315
Identity = 480/539 (89.05%), Postives = 488/539 (90.54%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAEDAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKK--------VQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGGEGGGVTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFNNAFLRTQPSVSATDRAFYVSMKDRLCKARAHPSEALPPTGGGDNEPAAPIPSSA 1593
            DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRA RPPPIT DPCSNDNGNGGAPSTA CVAPPAATGKPRGG DA VAPA+PEDSG V GAGAAEPSLDSV+GDASGSLTTSP+SSTAVQQGKKTAEVVGAGAEDA                                         VQPSAKREGFATVPGVSWSDVGALASVREEL LSILEPIAYPERFE+LGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGGEGGGVTERVVNQLLTEMDGLEARKNVFVVAATNR ELIDQAMLRPGRLDRLLYVPLPSA+DRVSILKALSATVSLGPDVDLHA+GH+PKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNF+NAFLRTQPSVSATDRAFYVSMKDRLCKARAHPSEALPP GGGDNEPAAPIPSSA
Sbjct:  428 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRATRPPPITGDPCSNDNGNGGAPSTAPCVAPPAATGKPRGGQDATVAPAHPEDSGSVSGAGAAEPSLDSVVGDASGSLTTSPASSTAVQQGKKTAEVVGAGAEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQPSAKREGFATVPGVSWSDVGALASVREELGLSILEPIAYPERFEKLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGGEGGGVTERVVNQLLTEMDGLEARKNVFVVAATNRPELIDQAMLRPGRLDRLLYVPLPSASDRVSILKALSATVSLGPDVDLHAVGHNPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFDNAFLRTQPSVSATDRAFYVSMKDRLCKARAHPSEALPPAGGGDNEPAAPIPSSA 966
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: A0A835ZH15_9STRA (Putative ribosome biogenesis ATPase RIX7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH15_9STRA)

HSP 1 Score: 536 bits (1382), Expect = 4.990e-177
Identity = 316/559 (56.53%), Postives = 380/559 (67.98%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSV-LGDASGSLTTSPSSSTAVQQGKKTAE--VVGAGAEDAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGGEGGG-VTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFNNAFLRTQPSVSATDRAFYVSMKDRLCKARAHPSEALPPTGGGDNEPAAPIPSSA*GRSD-PRARLGGGGRGKMAASRQ 1662
            DREICLGVPD   R RILEVM  +M L+G+ D+  IAK+TPGFVGADLSSLTKEAAV+AINRIF ++ +     I  D    D                                               E  +D+  L D  G++  +P+   A   G   AE  ++ + A+ A +        P  +   +   +TM+DFL AVKKVQPSAKREGFATVP V+W D+GALA+VREELSLS+LEPIA+PERF RLGL++PAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEK+VRQVFQRARASSPCI+FFDELD+LCP+RG GG+GGG V+ERVVNQLLTEMDGLE R++VFVVAATNR ELID AMLRPGRLD+LL+VPLP A DRVSIL+AL+ + +L  DVDL A+G  PKAEG+SGADL+ALLREAG+DVLR+LK+RE   G   Y   GA  + MA NF  AF RT  SVS  DR  Y++M+ RL +ARAH ++   P G   +  A P+  +  G  D P ++ G GG G   A  +
Sbjct:  312 DREICLGVPDQQGRQRILEVMCGRMRLSGEFDYGAIAKRTPGFVGADLSSLTKEAAVIAINRIFRQVLSCMLT-IKVDKSGTD-----------------------------------------------EVEVDAAPLSDVEGNMKEAPAPE-AESNGLVEAEAPLIESTADTAPQ--------PFGSRTRSGACITMDDFLEAVKKVQPSAKREGFATVPDVTWGDIGALAAVREELSLSLLEPIAHPERFARLGLSMPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKAVRQVFQRARASSPCIVFFDELDSLCPRRGSGGDGGGGVSERVVNQLLTEMDGLEERRHVFVVAATNRPELIDPAMLRPGRLDKLLFVPLPGAEDRVSILRALAKSATLSGDVDLAAVGSHPKAEGYSGADLSALLREAGVDVLRRLKAREAAEGVAVYDTPGAVCIGMA-NFEAAFERTARSVSDRDRRRYLTMQSRLRRARAHDTDDTAPEGAAADGVAEPVSKTRNGMGDEPGSKFGLGGAGGAHAGAE 812
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: H3GCX9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCX9_PHYRM)

HSP 1 Score: 482 bits (1240), Expect = 5.960e-156
Identity = 280/514 (54.47%), Postives = 343/514 (66.73%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAEDAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGGEG----GGVTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMAT---NFNNAFLRTQPSVSATDRAFYVSMKDRLCKARA 1521
            DREICLG+PD  AR +IL V+A KMTL GD DF  +A++TPG+VGADL SLTKEAAV A+NRIFT +   R                                K +  GDAA   A  E S  V    A E  +D+   +        P+ +T      K AE   + A+D    V      P + AQLAPLS+TM DF  A+ KVQPS+KREGFAT+P V+W D+GAL  VR+ELSL+IL+PIA+PERF  LGL++PAGVLLYGPPGCGKTLLAKAIA+ESGANFIS+KGPELLDKYVGESE+SVRQVFQRARASSPC++FFDELDAL P+R GG  G     GV+ERVVNQLLTEMDGL+ R+NVFV+AATNR ++ID AMLRPGRLD+LLYVPLP A++R  ILK +SA  ++ P V L ++   P+ EGFSGADL+AL+REAG+  LR+    +L        E GA TV +     +F +AF R  PSVS  D+  +  MK  L K+R+
Sbjct:  314 DREICLGIPDEEAREKILRVLARKMTLEGDFDFAALARRTPGYVGADLVSLTKEAAVGAVNRIFTNINTER--------------------------------KVKSEGDAASVSAETETSDAVTSEDAME--VDATYDN--------PAETT------KDAEETPSAADDLRAQVE-----PFTEAQLAPLSITMADFEAAIPKVQPSSKREGFATIPDVTWDDIGALTEVRDELSLAILQPIAHPERFAALGLSMPAGVLLYGPPGCGKTLLAKAIAHESGANFISIKGPELLDKYVGESERSVRQVFQRARASSPCVVFFDELDALAPRRSGGAGGDSGGNGVSERVVNQLLTEMDGLDGRRNVFVIAATNRPDIIDPAMLRPGRLDKLLYVPLPRASERHQILKTISAKCAMAPSVQLESVAADPRCEGFSGADLSALVREAGITALRETDFSKL--------EAGA-TVTLGIEHHHFISAFDRVFPSVSRADQRMFDRMKKNLRKSRS 765
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: A0A8K1C7Y3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y3_PYTOL)

HSP 1 Score: 481 bits (1237), Expect = 1.080e-155
Identity = 273/511 (53.42%), Postives = 332/511 (64.97%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAEDAAEAVGGFLAG--PLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGGE--GGGVTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFNNAFLRTQPSVSATDRAFYVSMKDRLCKARA 1521
            DREICLG+PD  AR RIL+V+++KM L+GD DF+ IA+KTPGFVGADL SLTKEAAV+A+NRIF+ +  A P P T                                                                    + T+ S+ T ++ G + A V      DAA    G  +   P +A QL PLS+TM DFL A+ KVQPS+KREGFAT+P V+W+D+GALASVREEL LSIL+PI +PERFE LGL +PAGVLLYGPPGCGKTLLAKAIANESGANFIS+KGPELLDKYVGESE++VRQVFQRARASSPC++FFDELDAL P+R G G   G GVTERVVNQLLTEMDGL++RKNVFV+AATNR ++ID AMLRPGRLD+LLYV LP  +DRV IL  ++    L P+V+L  I   P+ EGFSGADL+AL REAG+  LR++            T +G    +   +F  AF    PSVS  D+  +  MK  L ++RA
Sbjct:  334 DREICLGIPDEDARERILQVLSAKMKLSGDFDFKAIARKTPGFVGADLVSLTKEAAVIAVNRIFSSMLTAPPKPSTP-------------------------------------------------------------------IETAVSTDTPMENGDEAAAV------DAASTADGIRSKVTPFTAKQLEPLSITMADFLAAIVKVQPSSKREGFATIPDVTWADIGALASVREELVLSILQPIQHPERFEALGLKMPAGVLLYGPPGCGKTLLAKAIANESGANFISIKGPELLDKYVGESERAVRQVFQRARASSPCVVFFDELDALVPRRSGAGSEAGNGVTERVVNQLLTEMDGLDSRKNVFVIAATNRPDIIDPAMLRPGRLDKLLYVSLPVPSDRVQILTTVTKKSRLHPNVNLAEIAMDPRCEGFSGADLSALAREAGISALREIDIA---------TAQGDDLTIQQRHFYAAFETVFPSVSRADQRMFEKMKKNLRRSRA 762
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: A0A7S4IVS2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IVS2_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 1.290e-155
Identity = 269/462 (58.23%), Postives = 312/462 (67.53%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAEDAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRG--GGGEGGGVTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKG 1380
            DREI LGVPD  AR  I+ VM   M L+GD+D+  +AKKTPGFVGAD+ SLT+EAAV AINRIF  L  A                                                   GL + +GA   +    +    GS+      S+    GK           DAA         PL+  QLAP SVTM DFL AV +VQPS+KREGFATVP VSWSD+GAL+SVREEL+LS+LEPI++PERFE LGLT+PAGVLLYGPPGCGKTLLAKA+ANESGANFISVKGPELLDKYVGESE++VR VF RAR+SSPC++FFDELD+LCPKRG  GG  GGGV+ERVVNQLLTEMDGL+ R++VFVVAATNR ELID AM+RPGRLD+LLYVPLP   DR SIL AL   + LG DVDL +IG   +AEG+SGAD AALLREAGL VLR+ +   L+V KG
Sbjct:   50 DREITLGVPDEKAREGIVRVMTRDMRLSGDMDYALLAKKTPGFVGADVRSLTREAAVEAINRIFRSLGLA---------------------------------------------------GLGISSGAEVEAGAGAMEKGDGSMADGAVVSSDASNGKDA---------DAAAIASPRRRSPLNPTQLAPHSVTMSDFLAAVPRVQPSSKREGFATVPDVSWSDIGALSSVREELALSVLEPISHPERFEALGLTLPAGVLLYGPPGCGKTLLAKAVANESGANFISVKGPELLDKYVGESERAVRVVFDRARSSSPCVVFFDELDSLCPKRGSDGGSGGGGVSERVVNQLLTEMDGLDDRRSVFVVAATNRPELIDPAMMRPGRLDKLLYVPLPCPDDRASILNALGKKIRLGDDVDLDSIGRCHRAEGYSGADCAALLREAGLAVLREQRGT-LLVDKG 450
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: A0A2D4BYX5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYX5_PYTIN)

HSP 1 Score: 479 bits (1233), Expect = 8.280e-155
Identity = 275/511 (53.82%), Postives = 332/511 (64.97%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAEDAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGG----EGGGVTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFNNAFLRTQPSVSATDRAFYVSMKDRLCKARA 1521
            DREICLG+PD AAR RIL+V++SKM LAGD DF+ IA++TPGFVGADL SLTKEAAV+A+NRIF+ + A                      TA      AAT           AP              AE S +                       + TA+ + +               P + AQLAPLS++M+DF+ A+ KVQPS+KREGFAT+P V+W+D+GALASVR+EL LSIL+PI +PERFE LGL +PAGVLLYGPPGCGKTLLAKAIANESGANFIS+KGPELLDKYVGESE++VRQVFQRARASSPC++FFDELDAL P+R GG      G GVTERVVNQLLTEMDGL+ARKNVFV+AATNR ++ID AMLRPGRLD+LLYVPLP+  DRV IL+ ++    L  DVDL AI   P+ EGFSGADL+AL REAG+  LR++            T       +   +F  AF    PSVS  D+  +  MK  L +AR+
Sbjct:  336 DREICLGIPDEAARERILQVLSSKMKLAGDFDFKAIARRTPGFVGADLVSLTKEAAVIAVNRIFSTMLA----------------------TASSARSAAAT-----------APTQXXXXXXXXXXXXAESSNNH----------------------QSTADEIRSQVT------------PFTPAQLAPLSISMQDFVAAISKVQPSSKREGFATIPDVTWADIGALASVRDELVLSILQPIQHPERFEALGLKMPAGVLLYGPPGCGKTLLAKAIANESGANFISIKGPELLDKYVGESERAVRQVFQRARASSPCVVFFDELDALAPRRSGGAGGSDSGNGVTERVVNQLLTEMDGLDARKNVFVIAATNRPDIIDPAMLRPGRLDKLLYVPLPTPEDRVQILRTVTKASRLHADVDLAAIASDPRCEGFSGADLSALSREAGIAALREIDLA---------TASADALAIQHRHFEQAFETVFPSVSRADQRLFDKMKKNLRRARS 770
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: A0A1W0ACE8_9STRA (Ribosome biogenesis ATPase RIX7 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACE8_9STRA)

HSP 1 Score: 476 bits (1226), Expect = 9.110e-155
Identity = 268/507 (52.86%), Postives = 311/507 (61.34%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAEDAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGGEGGGVTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFNNAFLRTQPSVSATDRAFYVSMKDRLCKARA 1521
            DREICLG+PD  AR +IL V+ASKM LAGD+DF+ +A++TPG+VGADL SLTKEAAV+A+NR+FT L    P P       ND     AP T                                                                                               QL PLSV MEDFL AV KVQPS+KREGFAT+P V+W DVGAL  VR EL LSIL P+ +PERFE LGLT+PAGVLLYGPPGCGKT+LAKAIANESGANFISVKGPELLDKYVGESE++VRQVF+RARASSPCI+FFDELDALCP+RG    G GV+ERVVNQLLTEMDGL+ RKNV V+AATNR ++ID AMLRPGRLD+LLYVPLP A+DR  IL  LS    L P +DL  I   P+ E FSGADL+AL+REAG+ VLR+             T +  G  +   +FN AFL   PSVS  D+  +  MK  L K+RA
Sbjct:  307 DREICLGIPDAEAREKILCVLASKMRLAGDIDFKDLARRTPGYVGADLVSLTKEAAVLAVNRVFTTLLTDTPKPDAEQASINDEIRSFAPFTQE---------------------------------------------------------------------------------------------QLEPLSVCMEDFLLAVPKVQPSSKREGFATIPDVTWKDVGALVEVRAELVLSILHPLQHPERFEALGLTMPAGVLLYGPPGCGKTMLAKAIANESGANFISVKGPELLDKYVGESERAVRQVFERARASSPCIVFFDELDALCPRRGMSDGGNGVSERVVNQLLTEMDGLDTRKNVVVIAATNRPDIIDPAMLRPGRLDKLLYVPLPQASDRFQILTTLSKKCKLDPSLDLQQIAADPRCESFSGADLSALVREAGVAVLREADQ----------THQDTGLCIQMKHFNTAFLTVFPSVSKADQKIFEKMKKNLRKSRA 710
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: B8CDA1_THAPS (Nuclear vcp-like-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDA1_THAPS)

HSP 1 Score: 472 bits (1214), Expect = 1.130e-154
Identity = 278/508 (54.72%), Postives = 332/508 (65.35%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIF-TRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAEDAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGG-GGEGGGVTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQ--LKSRELIVGKGAYTEKGAGTVVMAT--NFNNAFLRTQPSVSATDRAFYVSMKDRL 1506
            DREI LG PD  AR  IL VM + M +AG +D++ +AKKTPGFVGAD+ SLTKEAAV+AINRIF T L +       +D      G G                               E   +      AEP  D    +   ++T                                    PL+  QL PL +TM+DFLTA+  VQPS+KREGFATVP VSW+D+GAL+ +REEL+LS+LEPIA+PE+FE LGL +PAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESE+SVR VF+RAR+SSPCIIFFDELD+LCPKRG  GG GGGV+ERVVNQLLTEMDGL++R++VFV+AATNR ELID AMLRPGRLD+LLYVPLPS  DR+SIL+ALS  + L PDVDLHAI + P + GFSGAD AALLREAGL VLR   L   +   G     +K    ++  T  +F  AF    PSVS  D+A Y  +++R+
Sbjct:  171 DREIVLGAPDEKAREGILRVMTASMRVAGTLDYKVLAKKTPGFVGADVRSLTKEAAVLAINRIFRTDLLSESKKKTATD------GEG-------------------------------ESMEVDNEKAEAEPPKDDGNSNDIRTIT------------------------------------PLTDTQLQPLYITMDDFLTAIPHVQPSSKREGFATVPDVSWNDIGALSDIREELTLSVLEPIAHPEKFEALGLPLPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESERSVRVVFERARSSSPCIIFFDELDSLCPKRGSDGGGGGGVSERVVNQLLTEMDGLDSRRSVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPSPTDRLSILRALSTKIKLAPDVDLHAIANDPHSNGFSGADCAALLREAGLAVLRDGVLNRTKDKDGNEVVDKKTEIKLLQITAYHFRYAFDHVLPSVSKKDQARYDRLRERM 605
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: A0A024U825_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024U825_9STRA)

HSP 1 Score: 476 bits (1225), Expect = 2.950e-154
Identity = 272/506 (53.75%), Postives = 325/506 (64.23%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAEDAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGGEGGGVTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFNNAFLRTQPSVSATDRAFYVSMKDRLCKAR 1518
            DREICLG+PD  +R RIL V+ASKM L+GD+DF+ +A++TPGFVGADL SLTKEAAV+A+NR+F+ L A                   AP+T H V                       D G   GA  A+                           K+T         D   +V      P +A Q+ PL V M DFL A+ KVQPS+KREGFAT+P VSWSDVGAL  VR EL LSIL P+ +PERF  LGL +PAGVLLYGPPGCGKTLLAKAIANESGANFIS+KGPELLDKYVGESE++VRQVF+RARASSPCI+FFDELDALCP+RG    G GV+ERVVNQLLTEMDGL+ARKNV V+AATNR ++ID AMLRPGRLD+LLYVPLP+A DR  ILK L+A  SL P +DL  + H P+ + FSGADL+AL+REAG+ VLR+             T       ++A +F  AF    PSVS  D+  +  MK  L K+R
Sbjct:  315 DREICLGIPDEPSRERILRVLASKMRLSGDMDFKDLARRTPGFVGADLVSLTKEAAVLAVNRVFSTLLATP-----------------APATPHGV-----------------------DFGDDTGANEAD---------------------------KRTVN-------DEIRSVA-----PFTAEQMEPLRVDMSDFLNALPKVQPSSKREGFATIPDVSWSDVGALVQVRAELVLSILHPLQHPERFTALGLKMPAGVLLYGPPGCGKTLLAKAIANESGANFISIKGPELLDKYVGESERAVRQVFERARASSPCIVFFDELDALCPRRGMSDGGNGVSERVVNQLLTEMDGLDARKNVVVIAATNRPDIIDPAMLRPGRLDKLLYVPLPTATDRYHILKTLAAKCSLDPSLDLEKVAHDPRCDSFSGADLSALVREAGVSVLRES------------TVHTTELKILAKHFEQAFQTVFPSVSKADQKIFEKMKQNLRKSR 729
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BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Match: A0A225WI79_9STRA (Ribosome biogenesis ATPase RIX7 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WI79_9STRA)

HSP 1 Score: 477 bits (1227), Expect = 3.980e-154
Identity = 275/511 (53.82%), Postives = 339/511 (66.34%), Query Frame = 1 
Query:    1 DREICLGVPDLAARARILEVMASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAARPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPEDSGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAEDAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPGVSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCGKTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCIIFFDELDALCPKRGGGGEG----GGVTERVVNQLLTEMDGLEARKNVFVVAATNRAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHAIGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFNNAFLRTQPSVSATDRAFYVSMKDRLCKARA 1521
            DREICLG+PD  AR +IL V+A KMTL GD DF  +A++TPG+VGADL SLTKEAAV A+NRIFT + AA+   +  D  S              VA    T  P G  D A+   + +D+                                  ++ KK A+   + A+D    V      P + AQLAPLS+ M DF  A+ KVQPS+KREGFAT+P V+W D+GAL  VR+ELSL++L+PIA+PERF  LGL++PAGVLLYGPPGCGKTLLAKAIA+ESGANFIS+KGPELLDKYVGESE+SVRQVFQRARASSPC++FFDELDAL P+R GG  G     GV+ERVVNQLLTEMDGL+ R+NVFV+AATNR ++ID AMLRPGRLD+LLYVPLP A++R  ILK +SA  +L P V L  I   P+ EGFSGADL+AL+REAG+  LR+    +L  G    T  G    +   +F +AF R  PSVS  D+  +  MK  L K+R+
Sbjct:  306 DREICLGIPDEEAREKILRVLAKKMTLEGDFDFAALARRTPGYVGADLVSLTKEAAVGAVNRIFTNINAAKKEAVEVDSTS--------------VAVQTETSDP-GTSDDAMTVDDTQDN----------------------------------EKKKKEAQESPSAADDLRAQVE-----PFTEAQLAPLSINMADFDAAIPKVQPSSKREGFATIPDVTWDDIGALNEVRDELSLAVLQPIAHPERFAALGLSMPAGVLLYGPPGCGKTLLAKAIAHESGANFISIKGPELLDKYVGESERSVRQVFQRARASSPCVVFFDELDALAPRRSGGAGGDAGGNGVSERVVNQLLTEMDGLDGRRNVFVIAATNRPDIIDPAMLRPGRLDKLLYVPLPQASERHQILKTISAKCALAPSVQLEVIAADPRCEGFSGADLSALVREAGITALRETDFSKLDAG---VTTLG----IEHHHFISAFDRVFPSVSRADQRMFDRMKKNLRKSRS 755
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7438.18617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQZ0_ECTSI1.050e-31589.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZH15_9STRA4.990e-17756.53Putative ribosome biogenesis ATPase RIX7 n=1 Tax=T... [more]
H3GCX9_PHYRM5.960e-15654.47Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8K1C7Y3_PYTOL1.080e-15553.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S4IVS2_9STRA1.290e-15558.23Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A2D4BYX5_PYTIN8.280e-15553.82Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1W0ACE8_9STRA9.110e-15552.86Ribosome biogenesis ATPase RIX7 n=1 Tax=Thraustoth... [more]
B8CDA1_THAPS1.130e-15454.72Nuclear vcp-like-like protein (Fragment) n=1 Tax=T... [more]
A0A024U825_9STRA2.950e-15453.75Uncharacterized protein n=9 Tax=Aphanomyces TaxID=... [more]
A0A225WI79_9STRA3.980e-15453.82Ribosome biogenesis ATPase RIX7 n=1 Tax=Phytophtho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7438contigEcto-sp13_S_contig7438:3..6334 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score860.1
Seed ortholog evalue5.1e-247
Seed eggNOG ortholog2880.D7FQZ0
Model size2266
KEGG koko:K14571
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000502,GO:0000731,GO:0002020,GO:0002082,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005829,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006914,GO:0006919,GO:0006950,GO:0006974,GO:0007034,GO:0007041,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010918,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016504,GO:0016567,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019985,GO:0022411,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030162,GO:0030163,GO:0030177,GO:0030234,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030970,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031593,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032984,GO:0032991,GO:0033036,GO:0033554,GO:0034098,GO:0034214,GO:0034404,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034976,GO:0035639,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036435,GO:0036503,GO:0036513,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043531,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045732,GO:0045838,GO:0045862,GO:0045935,GO:0045937,GO:0045981,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051788,GO:0051881,GO:0052547,GO:0052548,GO:0055086,GO:0060255,GO:0060828,GO:0061134,GO:0061136,GO:0061857,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070647,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0071218,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0080090,GO:0090085,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0098772,GO:0098796,GO:0098827,GO:0140030,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902494,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903862,GO:1904288,GO:1904949,GO:1905368,GO:1905369,GO:1990381,GO:1990730,GO:2000058,GO:2000060,GO:2000116,GO:2000152,GO:2000158,GO:2001056,GO:2001169,GO:2001171
Exons9
EggNOG free text desc.preribosome binding
EggNOG OGsCOG0464@1,KOG0733@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-09_003210.2
Cds size1536
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7438.18617.1prot_Ecto-sp13_S_contig7438.18617.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7438 568..5664 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464012.6545155-UTR-Ecto-sp13_S_contig7438:2..591681464012.6545155-UTR-Ecto-sp13_S_contig7438:2..59Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7438 3..59 +
1681464012.6797087-UTR-Ecto-sp13_S_contig7438:564..5671681464012.6797087-UTR-Ecto-sp13_S_contig7438:564..567Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7438 565..567 +
1681464012.7779722-UTR-Ecto-sp13_S_contig7438:5664..63341681464012.7779722-UTR-Ecto-sp13_S_contig7438:5664..6334Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7438 5665..6334 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464012.691571-CDS-Ecto-sp13_S_contig7438:567..11221681464012.691571-CDS-Ecto-sp13_S_contig7438:567..1122Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7438 568..1122 +
1681464012.703141-CDS-Ecto-sp13_S_contig7438:1337..14661681464012.703141-CDS-Ecto-sp13_S_contig7438:1337..1466Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7438 1338..1466 +
1681464012.7152286-CDS-Ecto-sp13_S_contig7438:2356..24831681464012.7152286-CDS-Ecto-sp13_S_contig7438:2356..2483Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7438 2357..2483 +
1681464012.725187-CDS-Ecto-sp13_S_contig7438:3047..32141681464012.725187-CDS-Ecto-sp13_S_contig7438:3047..3214Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7438 3048..3214 +
1681464012.7342265-CDS-Ecto-sp13_S_contig7438:3572..37181681464012.7342265-CDS-Ecto-sp13_S_contig7438:3572..3718Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7438 3573..3718 +
1681464012.744226-CDS-Ecto-sp13_S_contig7438:4350..44441681464012.744226-CDS-Ecto-sp13_S_contig7438:4350..4444Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7438 4351..4444 +
1681464012.7552419-CDS-Ecto-sp13_S_contig7438:4764..48821681464012.7552419-CDS-Ecto-sp13_S_contig7438:4764..4882Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7438 4765..4882 +
1681464012.7663648-CDS-Ecto-sp13_S_contig7438:5464..56641681464012.7663648-CDS-Ecto-sp13_S_contig7438:5464..5664Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7438 5465..5664 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7438.18617.1

>prot_Ecto-sp13_S_contig7438.18617.1 ID=prot_Ecto-sp13_S_contig7438.18617.1|Name=mRNA_Ecto-sp13_S_contig7438.18617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=512bp
MASKMTLAGDVDFQQIAKKTPGFVGADLSSLTKEAAVVAINRIFTRLRAA
RPPPITSDPCSNDNGNGGAPSTAHCVAPPAATGKPRGGGDAAVAPANPED
SGLVLGAGAAEPSLDSVLGDASGSLTTSPSSSTAVQQGKKTAEVVGAGAE
DAAEAVGGFLAGPLSAAQLAPLSVTMEDFLTAVKKVQPSAKREGFATVPG
VSWSDVGALASVREELSLSILEPIAYPERFERLGLTIPAGVLLYGPPGCG
KTLLAKAIANESGANFISVKGPELLDKYVGESEKSVRQVFQRARASSPCI
IFFDELDALCPKRGGGGEGGGVTERVVNQLLTEMDGLEARKNVFVVAATN
RAELIDQAMLRPGRLDRLLYVPLPSAADRVSILKALSATVSLGPDVDLHA
IGHSPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTV
VMATNFNNAFLRTQPSVSATDRAFYVSMKDRLCKARAHPSEALPPTGGGD
NEPAAPIPSSA*
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mRNA from alignment at Ecto-sp13_S_contig7438:3..6334+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7438.18617.1 ID=mRNA_Ecto-sp13_S_contig7438.18617.1|Name=mRNA_Ecto-sp13_S_contig7438.18617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6332bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7438:3..6334+ (Ectocarpus species13 EcNAP12_S_4_19m)
GACCGCGAGATCTGCCTGGGCGTACCGGACCTCGCTGCACGTGCACGCAT
CTTGGAGGTATGTAGGCAGCGACGTTCCACATGATCCTGTTGTTGCGGTA
GTAAATAGTGTTGCAGTAGTAGCAGTAAGAGGCGCAGCTCGTTGTCTTTG
GCTGAGCCGTCGTTGCGCGAGTGATCGAATCCCCTTAGACCGACTCTAAT
GGACAGATTTTCCACACACAAGGGGGTGCGAAATCCAGCAGATACAGCAC
GTCAACCAAAACCCTTCCTTGTCGGCGGTGATGCTCTCTCGGTCGTGGAG
TGATGGAGAATTTGAAGGTCTGCTTGGAGGGGGTGCGATTACCCGCGTAG
ATACCATGTGTTTTATTTCTTAGGTTTTCTTCGTGAGCGGTGGTGTTTTT
CGCACACCACCCACTTTCAGCAACTGCACAGTCTTTTTCTCGTTAATTTG
CTCTCTATGCCTCGTCAAGTTCCACTATGGGCATCTACATACTCGGGAAT
TGGATTGCCTTCTTGTGACACCTTTTGCTCCCTCGACGGTTTCCCTGCGC
TGAGAACAAAAGGTCATGGCGTCGAAGATGACCCTAGCAGGGGATGTTGA
CTTCCAGCAGATCGCCAAGAAGACCCCCGGCTTCGTCGGCGCCGACCTGT
CCTCGCTCACAAAGGAGGCCGCCGTCGTAGCGATCAACCGCATCTTCACC
CGCCTCCGCGCCGCGAGACCTCCTCCCATCACCAGCGACCCATGCAGCAA
CGACAACGGCAACGGCGGCGCCCCCAGCACTGCGCACTGTGTAGCACCAC
CAGCAGCGACGGGCAAACCACGCGGGGGGGGGGACGCGGCAGTCGCACCA
GCAAACCCGGAGGACTCGGGTTTGGTTTTAGGAGCAGGGGCGGCAGAACC
ATCTCTGGACAGTGTTTTGGGCGACGCGAGCGGATCCCTTACTACGTCGC
CGTCGTCTTCGACAGCGGTGCAGCAAGGCAAGAAGACGGCGGAGGTCGTT
GGTGCAGGCGCAGAGGATGCGGCGGAGGCGGTGGGGGGGTTCCTTGCGGG
GCCGCTGTCCGCCGCCCAGCTCGCACCACTCAGCGTCACGATGGAGGACT
TTTTGACGGCCGTGAAGAAGGTGATTCAGCACACACCGGGTTCTGATGAT
GTCGCCTTGTGCTTTTTTCATGTTGTGTTTTCTGTGTCGTCCACAACACA
CAGCTCTGTTGTTGCAACGTGGACCCTCTCGCGCCACTTAGGTATCTACA
AGAGTTCTCCATGTGATGACTGATATCCACAACACAACACTCGGCACTGG
AATCTTTTGCGAAACGTATCGACAACGCATCACAGGTCCAGCCATCGGCG
AAGAGGGAGGGTTTCGCTACCGTGCCTGGCGTTTCATGGAGCGATGTCGG
TGCTCTAGCTTCCGTCCGCGAGGAACTCAGCCTCTCCATCTTGGAACCTA
TAGCATACCCGGAGGTGTGCAAGAGCTTCCATGAGTCGATCCGCCGTGTA
TGCCCCCCAGTCTTGTCTATCGTGGACGTTTTCCCGCTTCATTGAGCGAA
TCTCCGACAACTCGTATGCACAGCGGCTACCGGTTGGAAGAGCGCAGCGA
GCGGGTGTTCAGTGCGTACGAGCGACCAACATCGGTGTCGCACTGGAACT
TGAACCAACTGAAACCAAAACAGTCTAGCGATCGTTTTGACCTGCCACGA
CGCGCTCTGAAGCGTGCAGCAGCGTAACTACCAGCAGCTACCATGGGTGA
CCGTGTTGGGAATGAGAAATGTGCGGTGTGGGTCCAGTGTTGGGCCTAGA
GACGGAAGATCATGCGCAAAACACCATCAAGTACACTCACTCCCAGCAGT
TTTTTGTAGAGCTTGCCCAACGCACGCGATAGCTTCGTGGTAGGCTTGCT
GGTATTGATTGATCTCGAGGTCGAGACCCCTCGCACAGGAGGCCCAGCCT
GAGCCCGGTGTAGAAGAGTAGTGGAGATTGGAGTCTTTGGTTTTCGAAGG
TGTGATTATGAAGAGGTATACCGGAAAGGAGTGTTTAGGAGGAAGCTCTT
TGACGCTCTTGTTTCAATCGATTCCCAGCCTGGAAAAAAGGAAGAAGCGT
CGCGCTCAGAGGACGTCTGCTTGATAGTTTTGTCTTGCATTACTGTACGA
TAGATATGTAGATGGCTTTTTACCTTTTACAATTTCGAAAGTAGGAAAAG
ACAATACATGTAATTTTTTTTCCTCTCAACGGATTCAGCCGTCTTGTCCC
AGCCACGATCTGCTGCATACGGGTGATTTTTTTCTGTGGTTTTCTGCCGC
ACACCAAACGTTTTGCGCTTTCTTGGGCACATCCGCACTGGTGCTGCTGT
GCAGAGGTTCGAGAGGCTGGGCCTGACGATTCCGGCTGGCGTGCTGTTGT
ACGGGCCCCCTGGTTGTGGTAAGACCCTGCTGGCGAAAGCCATCGCCAAC
GAGAGCGGGGCCAACTTCATCTCTGTCAAAGGTGCGCGATCGTTGTCGGC
AAGGACAGATCCAATAGTTTGACCTCGACCGTTACAAGGCCATCGATCAC
CAAATGACGGCGCAACGACCACCTCAATTGCATTTTTTTGCAGCCGGCCC
TGGTCTTGGTCTAGCACCTGGTCACCGTCGATGATGTTTTTACGTTCCGA
GCCCCCCAGGGTATGATGAGCTGAGTACTTTACCTTGGCGTGAACGAAGA
ACCATTAATCCTGAACTTGGCAACCCTCTCCCCTCCCCGCGAAGATCGAA
GTCCCTTGGCGGTGCTTCAAGTTAGTCGTGCCTCCCGAATGCGAAGCGTT
TGTTTAGACGGGATGTCCAATAAACCCATGACATGCTCATCCTTGTGAAA
CGTAGCATGGATCGGTGAAAGGCGACATATCACTCCGTCCTGGCATTTGC
AGGGATGCGAGGTGAATGGTCTAAGTACTCCCGCATGCGTGTACATCGGT
ACTACCCCCCTCCCCCCCCCACGAGTAATGTAACGAATTGCGTCGAGAAG
ACAACACTAAAGACGACTTACAGAAATAACACCAAACCTTTTTAGGTCCG
GAACTTCTAGACAAATATGTCGGAGAGTCGGAGAAATCCGTCCGCCAAGT
CTTCCAGAGGGCGAGGGCGTCCTCCCCATGCATCATTTTCTTCGACGAGC
TGGATGCTCTGTGCCCGAAGCGCGGGGGTGGGGGCGAGGGGGGCGGGGTC
ACCGAGCGGGTGGTGAGTATTCTCTCTCCTTTTGAGGCATGCTCAGCTGT
AGGGCCAAGGGTTGGCTGTCCTTCTCGGGACTTTCTTTGGCATCAAGGCA
TTCTCACAGGGCTTTAGTCGTCGGACGCCTTTGGTTGGGGGCGACGGAGG
CCGTCCAGCGAGTGTTGCGTGTAAACAGTCTAGCTTGCGGCGCATCCGTC
GCTTGCCGTCTTCAAATATTATCAACGGGGTTGATCGCTTGGGGAAAGGC
CCAAGAATGCCCTTGGTTATGGGGACAGACAGCAGCTAGACAGAAAACCA
AAACGGTCACGGTAGGCTCTCTCATCTCTTGTCCTGCTGTGCCGTCTCCT
TGCCGCATGATTCGCGTCAGGTGAACCAACTGCTGACAGAGATGGACGGG
TTGGAGGCTAGAAAGAACGTCTTCGTGGTTGCCGCCACCAACCGGGCGGA
GCTCATCGACCAGGCCATGCTTCGTCCTGGCCGGCTTGACCGTCTTCTGT
ACGTTCCTCTGCCGAGGTGAGAGAACCGACCGTAAATACATCCCCCATCG
CCTAGCGTTTGGAGATTCTCTCGCGGTATGCATGCTTGAAAAAACCCGGT
GAAATTGGCATCGCTCACTTTTCTCTGTGTTTTGGCTCTTCTCTTGGTGC
TCTTTTTTTGTTTTGTGGCTGGACGTTTTTTCGGCGATTTTGTCGACATA
CATGTTGTATTGGCGACAGAGATCGATGCACCAGGGTGTGACCGTTGACT
GGTCCAAGGAACCGTGCTGGTGCGAGCGTAACCGCAGTAGTTACCCATGA
TGGCACGAGTTTTCTCTACGCTGCCACTCGCGATCGTCGTTTAGAGGTAG
ATTAACATGCGTCGACCTCAGCTTACCTGCGCACGTAGCCCCCCTCGCTT
GTTGGTCCCCCTTCTTGCTAGTTTCAGTGCTGCCCACCGTCTTCCCTGTG
TACCTGCTGTTTCTTGCCTCTTCAATCGCCATGCAGGCTACAGGGTGTAC
CTTGAGAGCGGTGGGGGACGGTGTGTCGTATTTTCCGTCAGGGTGGTTTT
CAAGTACATGCTCCTTGTTGCTTGGCCCAACGTTGTTCCACGGCTTGATT
TACTCCGCTTCCTCCCTCTTTGTGTGGATGTATTTTTCTTTCCCGCAGCG
CCGCTGATCGCGTGTCCATCTTGAAGGCGTTGTCCGCCACCGTTTCTCTT
GGCCCCGACGTCGACCTCCATGCGATTGGCCACAGTCCCAAGGTAGGCTA
CCGTGATTTGATGTGTCGGTTAAGTATCACGACAACTTCTAGATAACACC
ACCCATCACAAAGCAGCACTCCCGTTGTGCAGACATGAGCATCGTGTGGA
TACAGCTTTATTGGGCTCCTTCATACCACTGTGTTTCTGTACGGCGACGA
CCATTTCAAGTCTGTACTTGTCACGCACACCTGGATGCGGAGAGGTTTGG
GCTGCTCCGAGCCTGATGCGGTGCGTCTTGTCTTTGAAGGGTTTTCATTT
TTCGGCAAAGTTGCATTGGTTCGGATAATTGATGAGAACGCACATTCTTG
ACAACGCTACAGGCGGAAGGCTTCAGCGGAGCCGACTTGGCGGCGCTTCT
GCGGGAGGCCGGGCTGGACGTCCTGCGACAGCTCAAGAGCCGCGAGCTAA
TCGTGGGCAAGGGCGCTTACACAGAAAAGGGTGAGCCCAGCTTGCGTCAT
ACGCTCCCCCCCGCGAGTTTGAGGCACTTGTAGATTTCTGAGCATGTGTC
CTTCCGCATTGGCTGGAGTATCTTTCCTGTTTGGTAGCCAGCGCAGGCGT
AGAACATGGGTCACACAGCGATGTTGTGAGAAAACACCAACTTTATGGAG
GGGGGCGTACTTCGCCCAAGCCACGCATTCAGCAAGTGTATGCTGGCTGG
CTTCGGAGGCTGGCATGCTCTGCCTGTATCCGCTGAATCCCCCGATTGAT
TTTGCAAATGCTTCTGGGTTTGATCAAAAATTGCGAGAGTTTTGAGGTTC
GGAGAGGTGTGGTGTACTATGTTTCCCCAGCGTTGAGAATTGTTTTGTCT
CTGTGGCACACATGGCATGCCCACGGTACCTTCTTCACGAATTGTCTTTT
TGAGAACATAAAGCAGAGCCGTCCCTCCCAGACCGCACGCACCTATGGAC
AGCGCCAACAATGTCACCTGTTCCGACCTTTCAAGATTCGCAGTAACACA
GCAATCTGGCGTGCTTTTTCCTCTTGTGCTCACCCTGCTACTTTCCTTGA
CGGACCCCACAGGAGCTGGAACGGTAGTGATGGCGACAAACTTCAACAAC
GCCTTCCTCCGGACGCAGCCTTCAGTGTCTGCCACCGATCGTGCCTTTTA
CGTCAGCATGAAGGATCGCCTCTGCAAAGCAAGGGCACACCCTTCGGAAG
CGCTTCCGCCTACCGGCGGTGGCGATAACGAGCCGGCAGCACCAATACCA
TCTTCGGCGTAAGGACGGAGTGATCCTCGTGCGAGGTTAGGTGGTGGAGG
CCGTGGCAAGATGGCGGCTTCGAGGCAAACGGAATGTGGAAATTAAGGCT
CGGTTTGGGGATTGATCAGTACTGAAGGCCGTGCGTGCGCCGCGTCTTCC
ACGCGCGTCGGTTATCTCAGGATTCATCTGTGCACGCGAGACCCACGCGA
TTGGTGCTGCCTTTGACGTTCGGAACACGTGGCGGGAAGGATAACAGACT
TGTTCCCAGAACAGTGTGATGTTTATTGGGGGTGCCGCGTTTGGTAAGTC
GGTGGCTAGATTGGGGATCAGTCACACCACGCTTAGACCCTCGTGGAACG
ATGTGCACGATTCGGAGATCCGTGAGTTGGGATGTTGTCTTGGATGCGAG
CATTTCGTTAGCGGTCCGTGGTACGCAAGGAGTTTTTTACCTTGTTTTTG
CCCGTGATCGTTTGTGAAGAAAATGTCTAGAGTCCAAGCTTTGCTGCTAG
TAGCGTGAGGCTGAGGTGGTGGTCGTTGTTGCAGCCGACAAGGATTGTTG
TATGTACCAGCAGTCCGTTAGTTTAAAGCATGCCTTGGATCTTGCTTGAG
TCAGGCCATTTAGTTGCCCTATGGGGTAGAAGGGTCAAGAACCCCCACCA
ACGAGAGTTTTGCATCGGGGGGGGAGAGGCAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7438:3..6334+

>mRNA_Ecto-sp13_S_contig7438.18617.1 ID=mRNA_Ecto-sp13_S_contig7438.18617.1|Name=mRNA_Ecto-sp13_S_contig7438.18617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1536bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7438:3..6334+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGTCGAAGATGACCCTAGCAGGGGATGTTGACTTCCAGCAGATCGC
CAAGAAGACCCCCGGCTTCGTCGGCGCCGACCTGTCCTCGCTCACAAAGG
AGGCCGCCGTCGTAGCGATCAACCGCATCTTCACCCGCCTCCGCGCCGCG
AGACCTCCTCCCATCACCAGCGACCCATGCAGCAACGACAACGGCAACGG
CGGCGCCCCCAGCACTGCGCACTGTGTAGCACCACCAGCAGCGACGGGCA
AACCACGCGGGGGGGGGGACGCGGCAGTCGCACCAGCAAACCCGGAGGAC
TCGGGTTTGGTTTTAGGAGCAGGGGCGGCAGAACCATCTCTGGACAGTGT
TTTGGGCGACGCGAGCGGATCCCTTACTACGTCGCCGTCGTCTTCGACAG
CGGTGCAGCAAGGCAAGAAGACGGCGGAGGTCGTTGGTGCAGGCGCAGAG
GATGCGGCGGAGGCGGTGGGGGGGTTCCTTGCGGGGCCGCTGTCCGCCGC
CCAGCTCGCACCACTCAGCGTCACGATGGAGGACTTTTTGACGGCCGTGA
AGAAGGTCCAGCCATCGGCGAAGAGGGAGGGTTTCGCTACCGTGCCTGGC
GTTTCATGGAGCGATGTCGGTGCTCTAGCTTCCGTCCGCGAGGAACTCAG
CCTCTCCATCTTGGAACCTATAGCATACCCGGAGAGGTTCGAGAGGCTGG
GCCTGACGATTCCGGCTGGCGTGCTGTTGTACGGGCCCCCTGGTTGTGGT
AAGACCCTGCTGGCGAAAGCCATCGCCAACGAGAGCGGGGCCAACTTCAT
CTCTGTCAAAGGTCCGGAACTTCTAGACAAATATGTCGGAGAGTCGGAGA
AATCCGTCCGCCAAGTCTTCCAGAGGGCGAGGGCGTCCTCCCCATGCATC
ATTTTCTTCGACGAGCTGGATGCTCTGTGCCCGAAGCGCGGGGGTGGGGG
CGAGGGGGGCGGGGTCACCGAGCGGGTGGTGAACCAACTGCTGACAGAGA
TGGACGGGTTGGAGGCTAGAAAGAACGTCTTCGTGGTTGCCGCCACCAAC
CGGGCGGAGCTCATCGACCAGGCCATGCTTCGTCCTGGCCGGCTTGACCG
TCTTCTGTACGTTCCTCTGCCGAGCGCCGCTGATCGCGTGTCCATCTTGA
AGGCGTTGTCCGCCACCGTTTCTCTTGGCCCCGACGTCGACCTCCATGCG
ATTGGCCACAGTCCCAAGGCGGAAGGCTTCAGCGGAGCCGACTTGGCGGC
GCTTCTGCGGGAGGCCGGGCTGGACGTCCTGCGACAGCTCAAGAGCCGCG
AGCTAATCGTGGGCAAGGGCGCTTACACAGAAAAGGGAGCTGGAACGGTA
GTGATGGCGACAAACTTCAACAACGCCTTCCTCCGGACGCAGCCTTCAGT
GTCTGCCACCGATCGTGCCTTTTACGTCAGCATGAAGGATCGCCTCTGCA
AAGCAAGGGCACACCCTTCGGAAGCGCTTCCGCCTACCGGCGGTGGCGAT
AACGAGCCGGCAGCACCAATACCATCTTCGGCGTAA
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