prot_Ecto-sp13_S_contig7437.18616.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7437.18616.1
Unique Nameprot_Ecto-sp13_S_contig7437.18616.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length580
Homology
BLAST of mRNA_Ecto-sp13_S_contig7437.18616.1 vs. uniprot
Match: D7FNQ2_ECTSI (Guanylate-binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ2_ECTSI)

HSP 1 Score: 825 bits (2130), Expect = 5.220e-290
Identity = 493/584 (84.42%), Postives = 509/584 (87.16%), Query Frame = 0
Query:    1 MVDGEGQDQSPAAHLDGALGVSGVGTVKDAFDRFFVRTNAARLPYPVNDLEKLQDLDPMRYSDLSDAYRGGVKTAVDLIVPECAPKELGGKTMDGTALATFLRKLTRVMNVPVVAGNDRFSTLLDVLETGELQAAEAAYRAEWERGENNYQGLPTGAENLIAKHSECVKRAELVADPRSSSXXXXXXXGGAVQDGDEAGASDGRSLRRPGFVQALHAALSGLYREYCLINVRLWSDGEIFGADEDLRALLKENQEEQRSGPGEQGDGDPELPPPPPEYSHVTAVFDSRRQRWNGDLVPDIIRSHPDMEALLVVRGDDSAMPGTGELTAEHVEALWHVVDSFLEQSLATATQQASEAFEDRMNDLDAEVRDLPRPPHLADVEMLSSNAKTAALDAYLAVKLAVGDDKAKETAAAQGWAGQAEAATRRWMTEAQQAVRGAGNGGGXXXDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------LAERVLRESHAPCVEKVTLKTNHVEKCLAKCRKIADEEWAQGREESDKQELLDERKPMVLDNAMDEKESEHA 577
            MVDGEGQDQSPAAHLDGALGVSGVGTVKDAFDRFFVRTNAARLPYPVNDLEKLQDLDPMRYSDLSDAYRGGVKTAVDLIVPECAPKELGGKTMDGTALATFLRKLTRVMNVPV AGNDRFSTLLDVLE GELQAAE AYRAEWE GENNY+GLPTGAENL AKHS+CV+RAELVADPRS+S       G A QDGD+ GASDGRSLRRPGFVQALHA LSGLYREYC+ NVRLWSD EIFGA+EDL ALLKE QE+QRSGPGEQ            EYSHVTAVFDSR QRWNGD+VPDII SH DMEALLVVRGDDSAMP TGELTA H  ALW VVDSFLE+SLA ATQQA EAFED+M++LDAEVRDLPRPPHLADVEMLSS AKTAALDAYLAVKLAVGDDKA ETA AQGWAGQAEAAT RWM+EAQQAVRGAGN G XXX  XXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX                LAERVL+E HAPCVEKVTLKTNHVEK LAKCRKIA+EEWAQGREESDKQELLDERKP VLD AMDEKESEHA
Sbjct:  273 MVDGEGQDQSPAAHLDGALGVSGVGTVKDAFDRFFVRTNAARLPYPVNDLEKLQDLDPMRYSDLSDAYRGGVKTAVDLIVPECAPKELGGKTMDGTALATFLRKLTRVMNVPVTAGNDRFSTLLDVLEGGELQAAEVAYRAEWEPGENNYEGLPTGAENLKAKHSKCVERAELVADPRSASSSSSGTGGVAGQDGDQEGASDGRSLRRPGFVQALHAVLSGLYREYCIANVRLWSDAEIFGANEDLGALLKEKQEQQRSGPGEQXXXXXXXXXXXXEYSHVTAVFDSRSQRWNGDIVPDIISSHADMEALLVVRGDDSAMPPTGELTAGHTGALWRVVDSFLEKSLAIATQQAQEAFEDQMDNLDAEVRDLPRPPHLADVEMLSSKAKTAALDAYLAVKLAVGDDKATETAIAQGWAGQAEAATGRWMSEAQQAVRGAGNDGDXXXXXXXXXXXXAGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXGGDGGDGGVGVDEAVALAERVLKERHAPCVEKVTLKTNHVEKSLAKCRKIANEEWAQGREESDKQELLDERKPTVLDKAMDEKESEHA 856          
BLAST of mRNA_Ecto-sp13_S_contig7437.18616.1 vs. uniprot
Match: A0A6H5L2D9_9PHAE (GBP domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D9_9PHAE)

HSP 1 Score: 785 bits (2026), Expect = 1.880e-272
Identity = 470/581 (80.90%), Postives = 489/581 (84.17%), Query Frame = 0
Query:    1 MVDGEGQDQSPAAHLDGALGVSGVGTVKDAFDRFFVRTNAARLPYPVNDLEKLQDLDPMRYSDLSDAYRGGVKTAVDLIVPECAPKELGGKTMDGTALATFLRKLTRVMNVPVVAGNDRFSTLLDVLETGELQAAEAAYRAEWERGENNYQGLPTGAENLIAKHSECVKRAELVADPRSSSXXXXXXXGGAVQDGDEAGASDGRSLRRPGFVQALHAALSGLYREYCLINVRLWSDGEIFGADEDLRALLKENQEEQRSGPGEQGDGDPELPPPPPEYSHVTAVFDSRRQRWNGDLVPDIIRSHPDMEALLVVRGDDSAMPGTGELTAEHVEALWHVVDSFLEQSLATATQQA----SEAFEDRMNDLDAEVRDLPRPPHLADVEMLSSNAKTAALDAYLAVKLAVGDDKAKETAAAQGWAGQAEAATRRWMTEAQQAVRGAGNGGGXXXDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAERVLRESHAPCVEKVTLKTNHVEKCLAKCRKIADEEWAQGREESDKQELLDERKPMVLDNAMDEKESEHA 577
            MVDGEGQ+QSP AHLDGALGVSGVGTVKDAFDRFFVRTNAARLPYPVNDLEKLQDLD MRYSDLSDAYRG VK AVD+IVPECAPKELGGKTMDGTALATFLRKLTRVMNVPVVAGNDRFSTLLDVLE GEL+AAEAAYRAEWERGENNY+GLPTGAENL A+H+E V+RAELVADPRSSSXXXXXXX    QDGD+AGASD RSLRRPGFVQALH  L GLY EYCL NVRLWSD EIFGA+EDL AL +E QE+QRSG                EYSHV AVF+ RRQRWNGD+VPDII SHPDMEALLVV GDDSA P TGELTA H+EALW VVDSFLEQSLATATQQA     EAFEDRM+DLDAEVRDLP PPHLADV+MLSS A T ALDAYL VKLAVGDDKAKETA AQGWAGQAEAATRRW+ EA +AVR AGN GG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       LAERVL+E HAPCVEKVTLKTNHVEK LAKCRKIADEEWAQGREESDKQELLDERKP VLD AMDEKESEHA
Sbjct:  276 MVDGEGQEQSPTAHLDGALGVSGVGTVKDAFDRFFVRTNAARLPYPVNDLEKLQDLDRMRYSDLSDAYRGDVKAAVDVIVPECAPKELGGKTMDGTALATFLRKLTRVMNVPVVAGNDRFSTLLDVLEAGELRAAEAAYRAEWERGENNYEGLPTGAENLKARHNEYVRRAELVADPRSSSXXXXXXXXXXGQDGDQAGASDVRSLRRPGFVQALHTVLRGLYWEYCLTNVRLWSDAEIFGANEDLGALRREKQEQQRSGXXXXXXXXXXXXXXXXEYSHVKAVFERRRQRWNGDIVPDIISSHPDMEALLVVMGDDSATPRTGELTAVHIEALWRVVDSFLEQSLATATQQAIHSAQEAFEDRMDDLDAEVRDLPMPPHLADVDMLSSKANTTALDAYLVVKLAVGDDKAKETAIAQGWAGQAEAATRRWIMEAHEAVRRAGNDGGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVA--------------------LAERVLKERHAPCVEKVTLKTNHVEKSLAKCRKIADEEWAQGREESDKQELLDERKPTVLDKAMDEKESEHA 836          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7437.18616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNQ2_ECTSI5.220e-29084.42Guanylate-binding protein, putative n=1 Tax=Ectoca... [more]
A0A6H5L2D9_9PHAE1.880e-27280.90GBP domain-containing protein (Fragment) n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10751GUANYLATE BINDING PROTEINcoord: 28..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7437contigEcto-sp13_S_contig7437:1031..7368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7437.18616.1mRNA_Ecto-sp13_S_contig7437.18616.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7437 1028..7368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7437.18616.1 ID=prot_Ecto-sp13_S_contig7437.18616.1|Name=mRNA_Ecto-sp13_S_contig7437.18616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=580bp
MVDGEGQDQSPAAHLDGALGVSGVGTVKDAFDRFFVRTNAARLPYPVNDL
EKLQDLDPMRYSDLSDAYRGGVKTAVDLIVPECAPKELGGKTMDGTALAT
FLRKLTRVMNVPVVAGNDRFSTLLDVLETGELQAAEAAYRAEWERGENNY
QGLPTGAENLIAKHSECVKRAELVADPRSSSSSSSGTGGGAVQDGDEAGA
SDGRSLRRPGFVQALHAALSGLYREYCLINVRLWSDGEIFGADEDLRALL
KENQEEQRSGPGEQGDGDPELPPPPPEYSHVTAVFDSRRQRWNGDLVPDI
IRSHPDMEALLVVRGDDSAMPGTGELTAEHVEALWHVVDSFLEQSLATAT
QQASEAFEDRMNDLDAEVRDLPRPPHLADVEMLSSNAKTAALDAYLAVKL
AVGDDKAKETAAAQGWAGQAEAATRRWMTEAQQAVRGAGNGGGGGGDAGG
GGDAGGKDAGAGNDGGAGGGGGGDSGDGGDGGDGGDGGDGGGGGDGGVGV
DEAVALAERVLRESHAPCVEKVTLKTNHVEKCLAKCRKIADEEWAQGREE
SDKQELLDERKPMVLDNAMDEKESEHADR*
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