prot_Ecto-sp13_S_contig7431.18613.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7431.18613.1
Unique Nameprot_Ecto-sp13_S_contig7431.18613.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length536
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7431.18613.1 vs. uniprot
Match: A0A6H5J7K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K4_9PHAE)

HSP 1 Score: 791 bits (2043), Expect = 9.310e-282
Identity = 454/536 (84.70%), Postives = 472/536 (88.06%), Query Frame = 0 
Query:    1 SEDVCLLNFCVFMLWDYLPTVWLLLVMEGTTGEHVGTSVVKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQCVSYSSWLSTEQSPRTS-GLRDPNHFKNVPAAPYNAQGGGGSYPSSVHSSRENLSQSGGXXXXXXXXXXXXXXXXXXXXXAATAGQVSSVGSSLGGMAFVTSHSSCSLESHDRQNRRGPFSWLLGWRRSATAEAXXXXXXXRGVSDGRXXXXXXXXXXXXXXXXXXSPFLWQASMNCGSSSYNQGSSXXXXXXXXXXXQRENANETSKASNGGGMGATVSRWWRRVLEGKREGSAPEQAGEAASLWQSSVADAPDNWYPGFGELSRAEVTYSLRGYRGPATRQERAISDDSSLGGGXXXXXIGGVWEGYRSETGPVRQTRRREEASVETAEHEGRQILAPPRREAVVREDYGSSGGDGGLGRPARINDRPGQTVDVGDGTFLKGRGGHDLRYPGQGEHGRSHRGGEELENRQGGTVRTEVARGGAQVVGGGRAWGERTGEGMYRPYHVPG 535
            SED+CLLNF VFMLWDY+PTVWLLLVMEGTTGEHVGTSVVKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQ +S SSWLSTEQSPRT+ GLRDPNHFKNVPAAPYNAQGGGGSYPSSVHSSRENLSQSG  XXXXXXXXXXXXXXXXXXXXAATAGQVSSVGSSLGGMAFV S SSCSLESHDRQNRRGPFSWLLGWRRSATAEA       RGVSDGR        XXXXXXXXXXSPFLWQASM+CGSSSY +GSS           +REN NE SK S+GGGMG TVSRWWRRVLEG+REGSAP+QA E ASLWQSS ADAPD W PGFGELSRAEV YSLRGYRGPATRQERAISDDSSLGGG     +GGVW+GYRSETGPVRQTRRREEASV+TAEH+GRQILAP RRE VVR+DYGSSG DGGLG+PAR +DRP QTVDVGDGTF +GRGGHD RYPG  EHGRSHRGGEELEN QGGTVRTEVARGGAQVV GG A GERTGE MYRPYHVPG
Sbjct:  190 SEDICLLNFSVFMLWDYVPTVWLLLVMEGTTGEHVGTSVVKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQYISSSSWLSTEQSPRTTCGLRDPNHFKNVPAAPYNAQGGGGSYPSSVHSSRENLSQSGVGXXXXXXXXXXXXXXXXXXXXAATAGQVSSVGSSLGGMAFVASPSSCSLESHDRQNRRGPFSWLLGWRRSATAEAEAGSGAVRGVSDGRARGHHRSGXXXXXXXXXXSPFLWQASMDCGSSSYIKGSSSS---------RRENENEMSKTSDGGGMGKTVSRWWRRVLEGRREGSAPDQAEETASLWQSSDADAPDKWSPGFGELSRAEVMYSLRGYRGPATRQERAISDDSSLGGGGAGG-MGGVWQGYRSETGPVRQTRRREEASVKTAEHKGRQILAPLRRETVVRQDYGSSGVDGGLGKPARSDDRPAQTVDVGDGTFSEGRGGHDPRYPG--EHGRSHRGGEELENWQGGTVRTEVARGGAQVVRGGLAGGERTGERMYRPYHVPG 713
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BLAST of mRNA_Ecto-sp13_S_contig7431.18613.1 vs. uniprot
Match: D7FSN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN3_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 2.980e-65
Identity = 111/116 (95.69%), Postives = 113/116 (97.41%), Query Frame = 0 
Query:    1 SEDVCLLNFCVFMLWDYLPTVWLLLVMEGTTGEHVGTSVVKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQCVSYSSWLSTEQSPRT-SGLRDPNHFKNVP 115
            SEDVCLLNFCVFMLWDY+PTVWLLLVMEGTTG+HVGTSVVKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQ  SYSSWLSTEQSPRT SGLRDPNHFKNVP
Sbjct:  245 SEDVCLLNFCVFMLWDYIPTVWLLLVMEGTTGDHVGTSVVKAVHPANYGDDLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQYFSYSSWLSTEQSPRTTSGLRDPNHFKNVP 360
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7431.18613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7K4_9PHAE9.310e-28284.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSN3_ECTSI2.980e-6595.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7431contigEcto-sp13_S_contig7431:2981..7508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7431.18613.1mRNA_Ecto-sp13_S_contig7431.18613.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7431 2981..7508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7431.18613.1 ID=prot_Ecto-sp13_S_contig7431.18613.1|Name=mRNA_Ecto-sp13_S_contig7431.18613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=536bp
SEDVCLLNFCVFMLWDYLPTVWLLLVMEGTTGEHVGTSVVKAVHPANYGD
DLRNLPDYGVFREIKAAAARDAARAERAWSGASTGQCVSYSSWLSTEQSP
RTSGLRDPNHFKNVPAAPYNAQGGGGSYPSSVHSSRENLSQSGGGGGGGG
SSSNGYGFYGYGSGSAATAGQVSSVGSSLGGMAFVTSHSSCSLESHDRQN
RRGPFSWLLGWRRSATAEAEAGSGAARGVSDGRARGHHRSGSGSRGGGGG
GSPFLWQASMNCGSSSYNQGSSSSYNKGSSSSSQRENANETSKASNGGGM
GATVSRWWRRVLEGKREGSAPEQAGEAASLWQSSVADAPDNWYPGFGELS
RAEVTYSLRGYRGPATRQERAISDDSSLGGGGGAGGIGGVWEGYRSETGP
VRQTRRREEASVETAEHEGRQILAPPRREAVVREDYGSSGGDGGLGRPAR
INDRPGQTVDVGDGTFLKGRGGHDLRYPGQGEHGRSHRGGEELENRQGGT
VRTEVARGGAQVVGGGRAWGERTGEGMYRPYHVPG*
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