prot_Ecto-sp13_S_contig743.18610.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig743.18610.1
Unique Nameprot_Ecto-sp13_S_contig743.18610.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length558
Homology
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 845 bits (2183), Expect = 2.420e-305
Identity = 503/558 (90.14%), Postives = 519/558 (93.01%), Query Frame = 0
Query:    1 MTALIADTSPILRNIPSDPADRRSFEFSPSPMPAQYLSEGAASQDHRRHSPSPHSYTAREVPALYPHRYGYNMGGPFAHSDPDMPVAAEKQQQQPAFKPSSSCRCQQRQCSCNSSCSKTAQKDSSSSESPHAMWRNSKGGDANMTTARPGLFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAHNQQQHSSRVMPRTIELTSSPSKKSDWENLLGAVDLELRAQQRSEFVPDSTSATPVPSHHYAHAINAAHLHHQHQPLDDAPPLLGRGGCGSSXXXXXXYTQQQPAAASVSPEFGPIKTAPAPGARHXXXXXXXXXXXXXXXXXYSGSTADAACLLATLPQRMLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GMMPPALVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSGRPFATAGAGGAAAPRSCTPPAAYPEGNASAXXXXXALPSPCAKRSRKTAFGDHDEDGWAREDGPWHPSRR 557
            MTALIADTSPILRNIPSDPADRRSFEFSPSPMP+QYLSEG A QDHRRHSPSPH+YTAREVPALYPHRYGYN+GG FAHSDP++P  AEKQQQQ AFKP+SSCRCQ+RQCSCNSS S+TAQKDSSSSE PHAMWRNSKGGDANMTTARP  FHGEAPAQQPPAAVSVSAPSRSPSPSAAILA N+QQHSSRV+PRTIELTSSPSKKSDWENLLGAVDLELRAQQRS+FVPDST ATPVPSHHYA AINAAHLH+QHQPLDDAPPLL  GG          YTQQQ AAASVSPEFGP+KTAPAP  RHXXXXXXXXXXXXXXXX YSGSTADAACLLATLPQRMLDR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+MPPALVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSGRPFATAGAGGAAAPRSCTPPA Y EG+A+A     ALPSP AKRSRKTAFGDHDEDGWAREDGPWHPSRR
Sbjct:    1 MTALIADTSPILRNIPSDPADRRSFEFSPSPMPSQYLSEGTARQDHRRHSPSPHNYTAREVPALYPHRYGYNIGGSFAHSDPEVPAVAEKQQQQLAFKPTSSCRCQRRQCSCNSSPSETAQKDSSSSEPPHAMWRNSKGGDANMTTARPSFFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAQNRQQHSSRVLPRTIELTSSPSKKSDWENLLGAVDLELRAQQRSKFVPDSTPATPVPSHHYARAINAAHLHYQHQPLDDAPPLLTGGG----------YTQQQRAAASVSPEFGPVKTAPAPAGRHXXXXXXXXXXXXXXXX-YSGSTADAACLLATLPQRMLDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGIMPPALVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSGRPFATAGAGGAAAPRSCTPPATYLEGDAAAAP---ALPSPTAKRSRKTAFGDHDEDGWAREDGPWHPSRR 544          
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 611 bits (1576), Expect = 1.150e-214
Identity = 365/487 (74.95%), Postives = 367/487 (75.36%), Query Frame = 0
Query:    1 MTALIADTSPILRNIPSDPADRRSFEFSPSPMPAQYLSEGAASQDHRRHSPSPHSYTAREVPALYPHRYGYNMGGPFAHSDPDMPVAAEKQQQQPAFKPSSSCRCQQRQCSCNSSCSK--TAQKDSSSSESPHAMWRNSKGGDANMTTARPGLFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAHNQQQHSSRVMPRTIELTSSPSKKSDWENLLGAVDLELRAQQRSEFVPDSTSATPVPSHHYAHAINAAHLHHQHQPLDDAPPLLGRGGCGSSXXXXXXYTQQQPAAASVSPEFGPIKTAPAPGARHXXXXXXXXXXXXXXXXXYSGSTADAACLLATLPQRMLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMMPPALVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSV 485
            MTALIADTSPILRNIPSDPADRRSFEFSPSPMPAQYLSEG ASQDHRRHSPSPHSYTAREVPALYPHRYGYNMGG FAHSDP +PVA EK                              TAQKDSSSSE PHAMWRNSKGGDANMTTARPGLFHGEAPAQQPPAAVSVSAPSRSPSPSAAILA NQQQHSSRVMPRTIELTSSP+KKSDWENLLGAVDLELRAQQRSEFVPDST ATPVPSHHYAHAINAAHLHHQHQPLDDAPPLL        XXXXXXYTQ QPAAASVSPEFGPIKTAPA  ARHXXXXXXXXXXXXXX   YSGSTADAACLLA                                                                    SGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISS 
Sbjct:    1 MTALIADTSPILRNIPSDPADRRSFEFSPSPMPAQYLSEGTASQDHRRHSPSPHSYTAREVPALYPHRYGYNMGGSFAHSDPQVPVAVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAQKDSSSSEPPHAMWRNSKGGDANMTTARPGLFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAQNQQQHSSRVMPRTIELTSSPAKKSDWENLLGAVDLELRAQQRSEFVPDSTPATPVPSHHYAHAINAAHLHHQHQPLDDAPPLLTGXXXXXXXXXXXXYTQHQPAAASVSPEFGPIKTAPA--ARHXXXXXXXXXXXXXXGPAYSGSTADAACLLA--------------------------------------------------------------------SGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSA 417          
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: D7FLT6_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT6_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.790e-28
Identity = 64/87 (73.56%), Postives = 72/87 (82.76%), Query Frame = 0
Query:  409 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSGRPFATAGA 495
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSEFDAARAYDAAA  H   G++LN PD IER+L ++S+  G+PFATAGA
Sbjct:  304 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAARVH-CPGSQLNNPDQIERELYELSAADGKPFATAGA 389          
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: A0A6H5KY97_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY97_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 7.680e-28
Identity = 63/87 (72.41%), Postives = 74/87 (85.06%), Query Frame = 0
Query:  409 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSGRPFATAGA 495
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSEFDAARAYDAAA + +  G++LN PD IER+L+++S+  G+PFATAGA
Sbjct:  421 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAA-RVYCPGSQLNNPDQIERELHELSAADGKPFATAGA 506          
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 119 bits (298), Expect = 1.130e-26
Identity = 57/95 (60.00%), Postives = 74/95 (77.89%), Query Frame = 0
Query:  403 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGI--------ERQLNDISSVSGRP 489
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD +A+++F +GA LNFPDG         ERQ   ++  S  P
Sbjct:  137 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDGRHTVVETDGERQTTVVNKASPMP 231          
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: A0A835Z3I9_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.270e-26
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0
Query:  405 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLN 470
            QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGV+DSE  AARAY+ +AL+HF  GAKLN
Sbjct:  227 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVYDSELQAARAYNDSALEHFGAGAKLN 292          
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 119 bits (298), Expect = 1.510e-26
Identity = 57/95 (60.00%), Postives = 74/95 (77.89%), Query Frame = 0
Query:  403 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGI--------ERQLNDISSVSGRP 489
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD +A+++F +GA LNFPDG         ERQ   ++  S  P
Sbjct:  150 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDGRHTVVETDGERQTTVVNKASPMP 244          
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: A0A835YVU4_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVU4_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 3.320e-17
Identity = 50/78 (64.10%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  406 ASGRRGPRGQSRFKGVCITRAGKWRAVI-------------YIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLN 470
            A  RRGPRGQSRFKGVCITRAGKWRAVI             +IGR+QKYLGVFDSE  AA AY+ +A Q F   AKLN
Sbjct:  187 AKSRRGPRGQSRFKGVCITRAGKWRAVICEWLAAVAEFLHNHIGRRQKYLGVFDSEVQAAVAYNESAKQFFGAEAKLN 264          
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.410e-16
Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 0
Query:  391 LVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 471
            L SAS P     R   + RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA  HF   A +NF
Sbjct:    4 LASASSPIKGGPRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84          
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.370e-15
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:  418 FKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 471
            ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA QHF + A +NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig743.18610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQM0_9PHAE2.420e-30590.14AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D8LFR4_ECTSI1.150e-21474.95Pathogenesis-related transcriptional factor and ER... [more]
D7FLT6_ECTSI1.790e-2873.56AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KY97_9PHAE7.680e-2872.41AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A6V1UZI2_HETAK1.130e-2660.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z3I9_9STRA1.270e-2686.36AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S3Y6J2_HETAK1.510e-2660.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YVU4_9STRA3.320e-1764.10AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CI56_9STRA2.410e-1656.79AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CH07_9STRA2.370e-1566.67AP2/ERF domain-containing protein (Fragment) n=1 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 417..478
e-value: 1.4E-8
score: 44.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 416..461
e-value: 3.2E-5
score: 24.1
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 417..472
score: 13.762
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 416..473
e-value: 2.4E-12
score: 48.5
NoneNo IPR availablePANTHERPTHR32467FAMILY NOT NAMEDcoord: 399..471
NoneNo IPR availablePANTHERPTHR32467:SF94FLORAL HOMEOTIC PROTEIN APETALA 2coord: 399..471
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 416..473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig743contigEcto-sp13_S_contig743:9766..12197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig743.18610.1mRNA_Ecto-sp13_S_contig743.18610.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig743 9597..12772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig743.18610.1 ID=prot_Ecto-sp13_S_contig743.18610.1|Name=mRNA_Ecto-sp13_S_contig743.18610.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=558bp
MTALIADTSPILRNIPSDPADRRSFEFSPSPMPAQYLSEGAASQDHRRHS
PSPHSYTAREVPALYPHRYGYNMGGPFAHSDPDMPVAAEKQQQQPAFKPS
SSCRCQQRQCSCNSSCSKTAQKDSSSSESPHAMWRNSKGGDANMTTARPG
LFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAHNQQQHSSRVMPRTIELT
SSPSKKSDWENLLGAVDLELRAQQRSEFVPDSTSATPVPSHHYAHAINAA
HLHHQHQPLDDAPPLLGRGGCGSSGGSGGGYTQQQPAAASVSPEFGPIKT
APAPGARHHRRGGGSGDHYSGGGPAYSGSTADAACLLATLPQRMLDRAST
SSSSKNHDHHHQTANSAAAAAAAAAAATMGGGGVGMMPPALVSASGPPVT
PVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFD
AARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSGRPFATAGAGGAAA
PRSCTPPAAYPEGNASAAAAAAALPSPCAKRSRKTAFGDHDEDGWAREDG
PWHPSRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf