mRNA_Ecto-sp13_S_contig7410.18595.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7410.18595.1
Unique NamemRNA_Ecto-sp13_S_contig7410.18595.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: A0A6H5K0T5_9PHAE (Mur_ligase_M domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0T5_9PHAE)

HSP 1 Score: 498 bits (1281), Expect = 1.080e-172
Identity = 289/356 (81.18%), Postives = 296/356 (83.15%), Query Frame = 1
Query:    1 GRLDGTNILKPALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRGVAESRGCPFHRWTDAFPEGTNAGDDEDYDEENTRLAEAGLILLGRSHPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXX----VVTVVLDVAHNPPAIVRFFQKVAKEFPGRRIRVVAAFSGDKDSKDCLSTILTSAAPERIHLAEASLAATRRATSVDVLASRLSELSGGTFDSSSSRVRRGDESVRQALRDAIAEASVSGGGGEGSERDVVVVCGTVFMMVDIREELGFDEPRD-----------------NLARTGTDG 1005
            GRLD TNILKPALTVVTS  L  DHT+ILGDTVE+IALEKAGIFKPGVP LVGDGCPVDIMRGVAESRGCPFHR TDA PEGTNAGDD+DYDEENTRLAEAGLILLGRSHP+ CVNEDALRRGVTQRPPCRFEVLQVDA AA                     XXXXXXXXXX    VVTVVLDVAHNPPAIVR FQKVAKEFPGRRIRVVAAFSGDKDS+DCLST+LT +APERIHLAEASLAATRRATSVDVLASRLSELSGG FDSSSSRVRRGDESVRQALRDAIAEASVSG G E  ERDVVVVCGTVFMM DIREELGFDEPRD                 NLARTGTDG
Sbjct:  145 GRLDATNILKPALTVVTSVGL--DHTRILGDTVERIALEKAGIFKPGVPALVGDGCPVDIMRGVAESRGCPFHRCTDALPEGTNAGDDQDYDEENTRLAEAGLILLGRSHPEFCVNEDALRRGVTQRPPCRFEVLQVDASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTVVLDVAHNPPAIVRCFQKVAKEFPGRRIRVVAAFSGDKDSEDCLSTVLTRSAPERIHLAEASLAATRRATSVDVLASRLSELSGGKFDSSSSRVRRGDESVRQALRDAIAEASVSGDGEE-LERDVVVVCGTVFMMADIREELGFDEPRDSAAAGEVGGSSNRAAQDNLARTGTDG 497          
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: A0A1Z5KRL5_FISSO (Dihydrofolate synthase / folylpolyglutamate synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRL5_FISSO)

HSP 1 Score: 185 bits (470), Expect = 2.460e-51
Identity = 121/328 (36.89%), Postives = 176/328 (53.66%), Query Frame = 1
Query:    1 GRLDGTNILK-PALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRGVAESRGCPFHRWTDAFPEGTNAGDDEDYDEENTRLAEAGLILLGRSHPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXXVVTVVLDVAHNPPAIVRFFQKVAKEFPGRRIRVVAAFSGDKDSKDCLSTILTSAAPERIHLAEASLAATRRATSVDVLASRLSELSGGTFDSSSSRVRRGDESVRQALRDAIAEASVSGGGGEGSERDVVVVCGTVFMMVDIREELGFDEPRDN 981
            GRLD TN++K P+L+V+TS  L  +HTKILGDTVE IALEK GI KPG P LVG   P +++R  A+ +G   H +T     G  + D+ DYD+EN R+A A + L+ + +P   ++++ + RG +QRP CRFE + +D+                                   V V+LDVAHNPPA+     K+   +P R  R+V   S DKD   C  +I+      RIHL EA   A  RA  V+ +  +  +L    +D       R D S+ + +  A+ +A+ S      +  ++VV+CG+VF+M + RE LG DEPRD+
Sbjct:  154 GRLDATNVVKAPSLSVITSIGL--EHTKILGDTVELIALEKGGIIKPGRPVLVGPHVPHEVLRQCAKEKGA-LHYYTCGDVVG-GSDDETDYDKENARIASAAVKLILKENPTWTISDEMIARGTSQRPSCRFEEMTLDSG----------------------------------VLVILDVAHNPPAMEYLIAKLKATYPDRSYRMVVGMSSDKDLNLCAQSIMQECDVSRIHLVEA---AHPRAAKVEEILEKAPQLREANYD-------REDPSITKQVHLAL-DAAAS------APNEIVVICGSVFLMTEAREALGIDEPRDS 426          
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: A0A7S2PFT3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PFT3_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.730e-48
Identity = 123/335 (36.72%), Postives = 182/335 (54.33%), Query Frame = 1
Query:    1 GRLDGTNILKPALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRGVAESRGCPFH-------RWTDAFPEGTNAGDDEDYDEENTRLAEAGLILLGRSHPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXXVVTVVLDVAHNPPAIVRFFQKVAKEFPGRRIRVVAAFSGDKDSKDCLSTILTSAAPERIHLAEASLAATRRATSVD-VLASRLSELSGGTFDSSSSRVRRGDESVRQALRDAIAEASVSGGGGEGSERDVVVVCGTVFMMVDIREELGFDEPRDN 981
            GRLD TNI+ P L+V+TS  L  +HT+ILGDTVE+IA+EKAGI K G P +VG   P D++R +A  RG  F+       +W+    +G  +    D+D EN+R+A A L LL + + ++ V  D + +G+  RPPCRFE  +V         ++T  ++  S    V             V VVLDVAHNP A+ +   K+   +P +  R+V  FS DKD K C+  +LT      IHL +A   A  RA S++ ++ +  S + G   D S       D S+   ++ A+  A+  G        +V+VVCG+VF+M + RE LG++E RD+
Sbjct:  252 GRLDSTNIVTPTLSVITSIGL--EHTRILGDTVEEIAVEKAGIIKEGKPVVVGPCVPHDVVRNIARERGADFYASGELTPKWSKDVEDGAESSA-VDFDAENSRIATAALKLLKQMN-EVDVEMDHIEKGIVSRPPCRFEQTRVSV-------SSTNDEIVISGGGNVGDVE---------VEVVLDVAHNPSALKQLVSKLEINYPNKAKRIVIGFSRDKDIKKCIEYVLTVVKSSGIHLVQA---AHPRAASIEQIMEAAPSLMEGARCDDS-------DRSITTQVQKALNLAAEQG--------EVLVVCGSVFLMAEAREALGYEEARDS 548          
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: A0A835ZCG7_9STRA (Mur ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCG7_9STRA)

HSP 1 Score: 171 bits (434), Expect = 4.080e-46
Identity = 108/219 (49.32%), Postives = 137/219 (62.56%), Query Frame = 1
Query:    1 GRLDGTNILKPALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRGVAESRGCPFHR-------WTDAFPEGTNAGDDE-DYDEENTRLAEAGLILLGR--SHPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXXVVTVVLDVAHNPPAIVRFFQKVAKEFPGRRIRVVAA 627
            GRLD TNI+ P+L+++TS  L  DHTKILGDT+E IA +KAG+ KPG+P LVGD CP+D+++G+A  RG PFHR            P      +DE D+DEEN+RLA AGL LL    S P   +N+ A+  G+ +RPPCRFEVL+V AP                       XXXXXXXXX  VTV+LDVAHNPPA+ R   K+  + PGR +R +AA
Sbjct:  145 GRLDATNIITPSLSIITSVGL--DHTKILGDTIEAIATDKAGVIKPGIPILVGDNCPIDLLKGIARERGAPFHRVHGVPTCLPPPLPPSLGVAEDERDFDEENSRLAAAGLSLLNTLGSAPGP-INDAAVLAGIAKRPPCRFEVLRVAAP------------------XXXXXXXXXXXXXXVTVTVILDVAHNPPAVRRLAAKLRADAPGRALRFIAA 342          
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: A0A7S3V740_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V740_9STRA)

HSP 1 Score: 172 bits (436), Expect = 6.550e-45
Identity = 126/344 (36.63%), Postives = 176/344 (51.16%), Query Frame = 1
Query:    1 GRLDGTNIL-KPALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRGVA-ESRGCPFHRWTDAFP------EGTNAGDDE-DYDEENTRLAEAGLILL---GRSHPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXXVVTVVLDVAHNPPAIVRFFQKVAKEFPGRRIRVVAAFSGDKDSKDCLSTILTSAA-PERIHLAEASLAATRRATSVDVLASRLSELSGGTFD----SSSSRVRRGDESVRQALRDAIAEASVSGGGGEGSERDVVVVCGTVFMMVDIREELGFDEPRDN 981
            GRLD TN++  P L V+TS  L  +HT+ILGDTVE IA+EKAGI K   P LVG  CP D++R  A E     ++   D         EGTN      DYD EN+R A A + LL    R+  KL + +  + + + QRPPCRF+ + V+           G  ++                      V+LDVAHNP A+     K+A  +P   +R+V  FS DKD +DC ST+L+    P RIHL EA   A  RA  ++ +      L    FD    S +++V+   + V Q+  +A  + S         E ++VVVCG+VF+M + RE +G DEPRD+
Sbjct:  339 GRLDATNVVTNPDLCVITSIGL--EHTRILGDTVELIAMEKAGIIKKDAPVLVGPNCPHDVIRQCALEKEAAGYYMCNDVLQPVTVEIEGTNTNAAYVDYDIENSRTARAAIKLLETSSRNKLKLPMEDSVMEKALAQRPPCRFQEMTVETD--------KGNNIK----------------------VLLDVAHNPDAMEHLIHKLAVSYPSNPMRIVVGFSADKDLQDCGSTLLSHVKDPHRIHLVEA---AHPRAAKLEDMLEAEPRLREANFDEANRSITAQVKLAIDLVEQSRDNADLKTS--------REEEIVVVCGSVFLMAEAREAIGIDEPRDS 639          
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: A0A7S2FSN5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FSN5_9STRA)

HSP 1 Score: 163 bits (412), Expect = 2.390e-44
Identity = 115/306 (37.58%), Postives = 162/306 (52.94%), Query Frame = 1
Query:   70 DHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRGVAESRGCPFHRWTDAFPEGTNAGDDEDYDEENTRLAEAGLILLGRSHPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXXVVTVVLDVAHNPPAIVRFFQKVAKEFPGRRIRVVAAFSGDKDSKDCLSTILTSAAPERIHLAEASLAATRRATSVDVLASRLSELSGGTFDSSSSR--VRRGDESVRQALRDAIAEASVSGGGGEGSERDVVVVCGTVFMMVDIREELGFDEPRDN 981
            +HT+ILGDT+E IALEKAGI K GVP LVG   P D++R  AE  G P+   TD   E   A +  D+D+EN+ +A A + L+     +  V      +G+  RPPCRFE + V    ++        +  S  S G              + VVLDV HN PA+ + F K+ + FPGR +R+VA FS DKD   CL  I  +     +HL +AS    R A + ++L   +     G  ++ ++   V  G   V  AL+ A  E+  SGG       ++VVVCG+VF+M + RE LGFDEP+D+
Sbjct:    1 EHTRILGDTIEAIALEKAGIMKAGVPVLVGPNVPHDVLRAHAERIGSPYFVATDLV-EYEGAAETTDFDDENSLIAMAAMRLVSDVDNRCSVTRHHEEQGIRCRPPCRFEAVDVLWDPSS--------RTVSQQSPG---------GGPQALKVVLDVGHNLPALAQLFAKLERTFPGRPLRIVAGFSRDKDLGGCLELIAAAKNVRALHLVQASHP--RAAPAQEILNLVMERNDPGDVEAVAAEGSVTTG---VHAALQ-ATGESQPSGG-------EIVVVCGSVFIMSEAREALGFDEPKDS 275          
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: B7G4J3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4J3_PHATC)

HSP 1 Score: 169 bits (429), Expect = 2.770e-44
Identity = 128/337 (37.98%), Postives = 179/337 (53.12%), Query Frame = 1
Query:    1 GRLDGTNILK-PALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRG-VAESRGCPFHRWTDAFP----EGTNAGDDEDYDEENTRLAEAGLILLGRSHPKLC--VNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXXVVTVVLDVAHNPPAIVRFFQKVAKEFPGRRIRVVAAFSGDKDSKDCLSTILTSAAPE--RIHLAEASLAATRRATSVDVLASRLSELSGGTFDSSSSRVRRGDESVRQALRDAIAEASVSGGGGEGSERDVVVVCGTVFMMVDIREELGFDEPRDN 981
            GRLD TN++K PA++++TS  L  +HT+ILGDTVE IA EKAGI KPG P LVG   P  + R   AE +  P++   D       +     +  DYD EN R+A AGL +L    PK    ++ED L++G + RPPCRFE   VD                    +G+              TV+LDVAHNPPA+    +K+A  +PG   RVV   S DK+ K C  +IL +   +  +IHL EA  A  R AT   +L    + L+   FD++       D S  + +++AI  A  +G        +++VVCG+VF+M + RE LGF+EPRD+
Sbjct:  289 GRLDATNVIKNPAISIITSIGL--EHTRILGDTVELIAREKAGIIKPGRPVLVGPNVPDAVTRECAAEKQSGPYYTVPDILGADLLDKLTTQEVLDYDLENARIARAGLKILETEFPKKITDISEDVLQQGTSTRPPCRFE--HVDC------------------GDGL--------------TVILDVAHNPPAMDYMVRKLATTYPGMSFRVVVGMSSDKNLKLCGQSILQAVQCDATKIHLVEA--AHPRAATLKAIL--EATGLTDAHFDTN-------DSSPTKQIKEAIKLARTNG--------ELLVVCGSVFLMAEAREALGFEEPRDS 570          
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: A0A5D6XL03_9STRA (Mur_ligase_M domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL03_9STRA)

HSP 1 Score: 164 bits (416), Expect = 8.790e-43
Identity = 129/365 (35.34%), Postives = 179/365 (49.04%), Query Frame = 1
Query:    1 GRLDGTNILKPALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRGVAESRGCPFHRWTDAFPEGTNAGDDE-DYDEENTRLAEAGLILLGR---------SHPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXXVVTVVLDVAHNPPAIVRFFQKVAKEFPGRRIRVVAAFSGDKDSKDCLSTILTS----AAPE----------RIHLAEASLAATRRATSVDVLASRLSEL--SGGTFDSSSSRVR----RGDESVRQALRDAIAEASVSGGGGEGSERDVVVVCGTVFMMVDIREELGFDEPRDNLARTGTDG 1005
            GRLD TNI+ PAL+V+TS     DHT+ILGDT+  IA EKAGI KPGVP +VG   P+++MRG A +   P             AGD E D+D ENT +A   L+ L R         S  ++ ++ D +   +  RPPCRF+VL +  P AA                               VT+VLDVAHN PAI R    +   FP +++R V  FS DKD +  L+TI  +    A+P           RIHL  A    + RA S++ + S L++   SG   D    +++         +   +  A+A A  S       + ++VVVCG+VF+M + R+ LGF EP D+ A T   G
Sbjct:  201 GRLDATNIVTPALSVITSIGR--DHTRILGDTIADIAREKAGIMKPGVPVIVGPHVPLELMRGHAAAVRAPLVAVA-------VAGDAEVDFDAENTAIAREALVQLNRLAQTNSSSKSSLRVDLDSDRVASALAARPPCRFQVLHIVRPNAA----------------------------ERKVTIVLDVAHNEPAIERLAGLLRARFPAQKLRFVCGFSADKDVRRVLATIAGACTHNASPAEARDAAQLQARIHLVRAG---SPRAASLEEVNSALADAATSGDDDDGEGQQLQLLPFASMTGIAVGVNAAVAAARAS------PDDEIVVVCGSVFLMAEARQALGFTEPVDSAAATAVAG 519          
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: A0A7S0C6V2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C6V2_9STRA)

HSP 1 Score: 162 bits (411), Expect = 9.030e-43
Identity = 120/337 (35.61%), Postives = 172/337 (51.04%), Query Frame = 1
Query:    1 GRLDGTNILK-PALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRGVAESRGCPFHRWTDAFPEGTNAGDDEDYDEENTRLAEAGLILLGRS-HPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXXVVTVVLDVAHNPPAIVRFFQKVAKEFPGRR-IRVVAAFSGDKDSKDCLSTILTSAAPERIHLAEASLAATRRATSVDVLASRLSELSGGTF--------DSSSSRVRRGDESVRQALRDAIAEASVSGGGGEGSERDVVVVCGTVFMMVDIREELGFDEPRD 978
            GRLD TN+++ P L V+TS  L  +HT+ILGDT+E IA EKAGI K   P LVG   P +++R VA+     ++  TD      N G   DYD EN+R+AE  L ++  S +  L ++EDA++ G++ RPPCRFE   VD                                    V V+LDVAHNPPA+     K+  ++P ++ IR V  FS DKD  +C   IL    P  IHL +AS +   RA S++ +     EL   TF          +   V  G+ + +     A+A+ +           +++VVCG+ F+M ++RE LG+DEPRD
Sbjct:  123 GRLDATNVVESPELCVITSIGL--EHTRILGDTIELIAGEKAGIIKKNCPVLVGPNVPHNVIRSVADKMQSDYYV-TDTRTANENCGGFVDYDIENSRIAETALRMVSSSSNDALALSEDAIQEGISIRPPCRFEETVVD----------------------------------DTVHVILDVAHNPPALQYLLAKLRADYPSQKNIRFVLGFSSDKDLANCTRQILNEK-PSGIHLVQASHS---RAASIEDILEVAPELK--TFAHYDIPRRHENDGYVENGNITTQVEAALALAKEN----------NELLVVCGSAFIMSEVREALGYDEPRD 406          
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Match: A0A7S1FM90_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FM90_9STRA)

HSP 1 Score: 163 bits (412), Expect = 2.380e-42
Identity = 133/361 (36.84%), Postives = 183/361 (50.69%), Query Frame = 1
Query:    1 GRLDGTNIL-KPALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPTLVGDGCPVDIMRGVAESRGCPFHRWTDAFPEGTNAG--DDE----------------DYDEENTRLAEAGLILL---------GRSHPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATGKQVESSYSEGVAGXXXXXXXXXXVVTVVLDVAHNPPAIVRFFQKVAKEFPGRRIRVVAAFSGDKDSKDCLSTILTSAAPERIHLAEA--SLAATR---RATSVDVLASRLSELSGGTFD-SSSSRVRRGDESVRQALRDAIAEASVSGGGGEGSERD-VVVVCGTVFMMVDIREELGFDEPRD 978
            GRLD TN++ +PA++V+TS  L  +HT+ILG+T+E+IA+EKAGI K G P L+G   P DI+R  AES G       D      + G  DD                 D+D EN+RLA A L ++         G +   L +++  +  G+T RPPCRFE+L V +P A                                VTVVLD+AHNPPA+ + F K+   FPGR++RVV   S DKD     S +L+    E +HL +A  S AAT    ++ + D + +  +   G   D   +SR R     V +AL  A             S+RD V+VVCG+VF+M + RE LGFDEPRD
Sbjct:  157 GRLDATNVVPRPAVSVITSIGL--EHTRILGNTIEKIAIEKAGIMKKGRPVLMGPCVPHDIVRKHAESVGAGKVFTVDDVLGSDDGGKIDDGPRILQNLSGKQLATAVDFDYENSRLACAALQIVAEEGRRQLDGHAPHLLPISDSDVHYGMTVRPPCRFEMLDVWSPMA-----------------------------NVNVTVVLDIAHNPPALTQLFTKLNTTFPGRKLRVVIGMSSDKDISASASIVLSCVPSENVHLIQAAHSRAATLEQIKSAAPDFVRTTSNGCHGNDGDCDDNSRRRNISFQVGEALEIA-------------SQRDEVLVVCGSVFIMSEAREALGFDEPRD 473          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7410.18595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0T5_9PHAE1.080e-17281.18Mur_ligase_M domain-containing protein n=2 Tax=Ect... [more]
A0A1Z5KRL5_FISSO2.460e-5136.89Dihydrofolate synthase / folylpolyglutamate syntha... [more]
A0A7S2PFT3_9STRA1.730e-4836.72Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A835ZCG7_9STRA4.080e-4649.32Mur ligase n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S3V740_9STRA6.550e-4536.63Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2FSN5_9STRA2.390e-4437.58Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B7G4J3_PHATC2.770e-4437.98Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A5D6XL03_9STRA8.790e-4335.34Mur_ligase_M domain-containing protein n=1 Tax=Pyt... [more]
A0A7S0C6V2_9STRA9.030e-4335.61Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1FM90_9STRA2.380e-4236.84Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7410contigEcto-sp13_S_contig7410:1709..7521 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score421.8
Seed ortholog evalue3e-115
Seed eggNOG ortholog2880.D8LR03
Model size1008
KEGG rclassRC00064,RC00090,RC00162
KEGG koko:K01930,ko:K11754
KEGG ReactionR00942,R02237,R04241
KEGG Pathwayko00790,ko01100,ko01523,map00790,map01100,map01523
KEGG ModuleM00126,M00841
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.tetrahydrofolylpolyglutamate synthase activity
EggNOG OGsCOG0285@1,KOG2525@2759
Ec32 ortholog descriptionFolylpolyglutamate synthetase
Ec32 orthologEc-07_002300.1
EC6.3.2.12,6.3.2.17
Cds size1008
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7410.18595.1prot_Ecto-sp13_S_contig7410.18595.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7410 1709..7521 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464010.515693-CDS-Ecto-sp13_S_contig7410:1708..17411681464010.515693-CDS-Ecto-sp13_S_contig7410:1708..1741Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7410 1709..1741 -
1681464010.5301528-CDS-Ecto-sp13_S_contig7410:2478..26081681464010.5301528-CDS-Ecto-sp13_S_contig7410:2478..2608Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7410 2479..2608 -
1681464010.5407507-CDS-Ecto-sp13_S_contig7410:3445..35731681464010.5407507-CDS-Ecto-sp13_S_contig7410:3445..3573Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7410 3446..3573 -
1681464010.5515482-CDS-Ecto-sp13_S_contig7410:4325..44601681464010.5515482-CDS-Ecto-sp13_S_contig7410:4325..4460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7410 4326..4460 -
1681464010.5620172-CDS-Ecto-sp13_S_contig7410:4959..51901681464010.5620172-CDS-Ecto-sp13_S_contig7410:4959..5190Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7410 4960..5190 -
1681464010.5808911-CDS-Ecto-sp13_S_contig7410:6015..61801681464010.5808911-CDS-Ecto-sp13_S_contig7410:6015..6180Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7410 6016..6180 -
1681464010.5946658-CDS-Ecto-sp13_S_contig7410:6648..67691681464010.5946658-CDS-Ecto-sp13_S_contig7410:6648..6769Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7410 6649..6769 -
1681464010.6069455-CDS-Ecto-sp13_S_contig7410:7040..70511681464010.6069455-CDS-Ecto-sp13_S_contig7410:7040..7051Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7410 7041..7051 -
1681464010.6168501-CDS-Ecto-sp13_S_contig7410:7467..75211681464010.6168501-CDS-Ecto-sp13_S_contig7410:7467..7521Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7410 7468..7521 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7410.18595.1

>prot_Ecto-sp13_S_contig7410.18595.1 ID=prot_Ecto-sp13_S_contig7410.18595.1|Name=mRNA_Ecto-sp13_S_contig7410.18595.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=336bp
GRLDGTNILKPALTVVTSSALLLDHTKILGDTVEQIALEKAGIFKPGVPT
LVGDGCPVDIMRGVAESRGCPFHRWTDAFPEGTNAGDDEDYDEENTRLAE
AGLILLGRSHPKLCVNEDALRRGVTQRPPCRFEVLQVDAPAAAAAGAATG
KQVESSYSEGVAGAGGGGSGGGGVVTVVLDVAHNPPAIVRFFQKVAKEFP
GRRIRVVAAFSGDKDSKDCLSTILTSAAPERIHLAEASLAATRRATSVDV
LASRLSELSGGTFDSSSSRVRRGDESVRQALRDAIAEASVSGGGGEGSER
DVVVVCGTVFMMVDIREELGFDEPRDNLARTGTDG*
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mRNA from alignment at Ecto-sp13_S_contig7410:1709..7521-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7410.18595.1 ID=mRNA_Ecto-sp13_S_contig7410.18595.1|Name=mRNA_Ecto-sp13_S_contig7410.18595.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7410:1709..7521- (Ectocarpus species13 EcNAP12_S_4_19m)
GGACGGTTGGACGGGACGAACATATTGAAGCCGGCTCTAACCGTCGTCAC TTCCGTCGGGGGGGTGGAACTCTCAGCACTGGACATGGAAGAACCCCCCC CCCCCCCCCTCCCCCCGCCTTTCTATCTGGTAGCCACCGACCGCACCATG ACCTGTTGCTGCGCTGATGAGTTTGTTCGCCTGGCACAGACGCAGAGCTT CGATTGTCTCCGACCTTGGGCAAAGTTGGTGCCCTCTTTTTTTCATACCT CCTGCGCACTTTGATGGGCGTAGCACCGCCTACCTTCGATAGACACAATG GTAGTCTTCGCGGTGATCAAATTGTGATAGTTTTTGACACCACGCAAGAA CGTCATGATTTAACCACTACCACGATAACATCAACCCTAGAAAAATGCAG CAGCACCACCGGTGCGCTGTAGCCGTTGCAACGTCGAGGAGCTTTCCGTG TGAACGCGCGGCGAGTGTAGTCGGCTCTTTTGTTGTTGCGGTATTCGCTA CATGTGTAGAAAGGCTCTCACTGAGGAGAATGCCAAAATGGCTCCCTCGT TTAGTGGACAGCAGCGGCGTCAGCACGCTCCTACTTTGTGTTTCGGCGCG CCTAGTCAGCCGGCGCTACGCGCTGTTTTGGTCGTACAAATGTTCCTGTG GATGTCCACATGTTCCCTCATTATTCTTCCTCCCCTTGTCGATGCTGTTT CGCTTCCGTTTTCCTGCTGTTTCTCTTACCATACGCAACGAAAACAAACA AGGCTTGACCACACCAAGATCTTGGGAGACACGGTGGAGCAAATCGCCCT CGAGAAGGCCGGGATTTTCAAGCCGGGCGTCCCCACTCTCGTTGGCGACG GCTGTCCTGTCGATATCATGAGGGTGAGCTTCCGGCGGAAGAGTGGGGTT GGTTTCGATGACCTTTATCGAACATCACGATGGTGTTCCTTGTCGTCATA GCTGCTGATGTTGTTGCTGTTGTTGTTGTTGCTGTTGTTACTGTTGCCTT TTTCCTTGAGAGGCATGCCGAATCTCCCGCCGAAAGGTATGGTAGCTGTG TTTTAAAACTCCCCAGAAGTTTTTTGTGTCGATTCTGCTTCTGAAATTGA AAAATAACAAATAACACCTTGGACGTGGTTCCCGAGAGCTGCATGCTAAG CCAAAGGACTCTGGTGCACACACTATGCAGACAACGTCCCCCTGCGCGAG CTTGGTTTATATTTTCCCATCCACGCTAGTCCCCTCCTCCCCTACCGCTG CTAGTCTACAAAGGCGTGGCCGTTTACCAATGACACCCCCCTCCTCGCGC CGTTTCTATGCTTTCGAACACACTAACAAACTGCCGCATAGGGCGTGGCC GAGAGCAGAGGGTGCCCGTTCCACCGCTGGACAGACGCCTTCCCCGAAGG AACTAACGCCGGAGATGATGAAGATTACGACGAGGAGAACACCCGCCTGG CCGAGGCCGGCCTGATACTGCTGGGCCGTTCCCACCCGAAGTTGTGCGTT AACGAGGTATGTGTTGTGCATCGGACGTGAGAGATAGTTTGTTCACATTT AGACACGGCTGATCAGCTTCTAAGAGAGCGGGGGAGAGTGGGATAGAAAT AGAGGGGGTGCGAATAGAGAGAGAACGGGGGTATTGTAGAATACTGTTTT GTGCGATCCGACGCACGTTGGAAGCATGTCCAACCAATGGGAATGGATGA GGCTTGAGGCTGTTCTCTCTGTCGCTCCCACCGTGTACACAACACAATGC TACCCGGAATAAAGGGCGGATGTGTCACTGCATTGTTTTTCGAGGCAGGG ACCGCAAGTGGTTCAAGTGCGAGGAGAAAAGCAACTCGGTGGGTGTGCCA TGGGCGCTGGGGAGGTCAATTAGTGCGAAATGGAGTCCTGTTCCTTGCTT CATTTTTTTTAACGTTATTTTGATATTTTTGGTGCGTCGAGGACGCGCAG ACGCAAGACTTCCTGTGGAACATCTCGCACTTGTTTGTTGACATGGGTGG ACAATGAACGCACATTGGGGCTGCCGCGTTCTGCTCCAGATCGTGAGCGA AAGCACGACGAGACTACAGACTTTTTCGGACGACCGATCGTTTGCCGTCT TTAGACCCTTGCAGCCCCCCCCCCCCTCGCAAACTCCAAAGCATTCTCCG CTGCTGCAATGGAGTGTTCTTCCAGAATCATACGTCCATTAATTTAGCCG TCCGTACCGCCCCCACCATGTCCATTCTATCGCTGGATTGGCCAGCACAC ATACATGCAACCACACGCATTTCAACCATCCTTTTCGTTGCACCACCGCC GGCAAAAATCCTCCGCACCTTTGTTTGCCAGGACGCCTTGCGCCGCGGCG TGACGCAGCGACCACCGTGCCGCTTCGAGGTGCTCCAGGTAGACGCCCCC GCGGCGGCGGCGGCGGGGGCGGCCACCGGAAAACAAGTCGAATCTTCATA TAGCGAGGGAGTAGCCGGTGCCGGCGGCGGGGGAAGCGGAGGCGGAGGCG TTGTCACGGTGGTGCTGGACGTTGCACACAACCCTCCGGCGATCGTTCGG TTTTTCCAGAAGGTGATGGACAAAGTGGATACACGTACAAACTGTTTGTG TCCTAAATTGTTCTCCCTCATTCCCGACACCGAGGGAAAAGAAAAAGCCG CCGCTTCGAGCCGACCACTCGTCGTCGTCTCCATACGATTAGGGCTTGTC ATTTTTTTTACCCTTTTCGTTGTTGTTTCATTTCCACCCGCCCCCTTCAT TTGTGATATCCGTTGTGCTTGGTCGTCGTCTTTCCGCCTCTTGTGCGATT CTGTCTCGTGTGTGACGCTTGAGGTCCTCGACGATTTCACGATTACATCG CCAATCCCATTGACTTTGGCTGCTGATGGGGGTGTTGTATCCACCTTGTT TCACTCCCGCGTTCCGCCGATCTCTCGCGCGTCGTATTTAGATGGACACC TCCTTTTTGTGCCCACGCCGTCGTTCGGATGAGAATGCATGGCACAAAGA GTAGGCATCTTTATCTTTTTGTGCCCGAGATATTTATTTTTGGGGTCTTT TCATTCAACAGGTGGCGAAGGAGTTCCCGGGGAGGCGTATTCGTGTTGTG GCGGCATTTTCAGGCGACAAAGACTCCAAGGATTGCCTCTCGACAATCTT GACAAGCGCTGCCCCCGAAAGGATACATCTTGCCGAGGCAAGCCTCGTTC TATCGTATGCGTTGCGCTGAACTAATCTCGAGCAAATGGGGTAGGCTTGT GCCATGCTATTTACCAACGTTCAGTAGACATGTATTCATAGTGTAATGTA GAGATTTTTTTTTCGGTGCCGGACTTTGGAAAATGGATGGCACAAAGAGT AGGCGTCCTTTATAGAGGGCATGCCCTAGGGCGTTGTTTCCGAAATACGT CTATTTCATATGGAAGAAGTAAAACTTCGTTTTGTAAGGTACTTGGCCTG CTTTCACAGGTTCAGCATGCCGCCGAGGGCGTACACACCAGAAGGCTCGA ATGGAGTGTATTGCCTAGAGGCGTGTGCCTTGCACAATGCTGCTAACAAA ACAATTTCGATGTTTGACAATTGATGTTTGGGCGTGCGATGTGTCGTTTC GTCACCCATTCCACGAAATCTCTGAGGCCGATATTGGACGAGCCGATACG AGGAGACGACGTATTTTTCCTCATCGCTGGCCGACCTCCGCCCCGTTCCA ATCCCGCGTATTTCTATATAGCCAGTTTCTGTAGGTTGCACCCACCCTGA ATAGAACGCAGCAACATGCGGAAGAAACGAACTATTCGCTCCTCCGCTGC AACCCAGACTTCGATTCTTGCTTGAGTGGCGAAACATGGCCTCCCGGCGT GCATCTAGGATTAATAAAGCGAACGAAAGTCAAATACGAGTCAAGTGACG CATGCGTGGTTTCCCCGCTTGCCCCGTCACTCACACCCGTCGTGACAGGC TGCCACTCGTCGAGCAACGTCGGTGGACGTCTTAGCCTCGCGCCTTTCAG AGCTGTCCGGAGGGACGTTCGACTCGTCGTCGAGCAGGGTGAGGAGGGGA GACGAGAGCGTGCGGCAAGCTTTAAGGTAAGAAAGAGCAATGTTGTTGTG CGCTTGTTGTTGCATTAGCTTCAAGGTAAAGGAGGAAGAGAGGGAATAGT GTAGCCGTGTGTTGTTGGTGTTGCTGCTGCTACAGCTAGTTTTCTTGTTT TGTGCCACTCGAGGTACGCAGCGGTGGACGAACGCTCCATATTGATGACA TCATCAAGGGTGATGGAGGTAGTCGTGGTCGTGCAGGGTACCTCGCTCAG ACGCGTGTGCAGAGCTACCTCGCATACACGCGGCTGGTGTTTCATCCACT TCTGAGCATTTCGAAGCCGCGGCAGCCACGACGTTTAGCCATAGATGTCT ACTTCCAATCATCGTCCCGGGCTTTGACTTTGTCATGCTGTCTCGGTTCG CTCCTCTTCCCCGGCTACTACCCCAGACCGCTTCGCTCCACAACTCCAAC CGCACACAATCAACGAGCAAGCATCTGACGGCGACAACTTTGCCCAAAGT GTATCTTGATATATTTTTGTAACACTGAAGGGTTTCGGTTTGAGCTAGGC CGGCCTCCACGGCGCAAAACTCGGCACCAACGTCGTTGCCCCGACCCCCT TCCCGTTGCGGTAACTCCAATGCTATCATCGAAACCATATCGAACGCAGA CGCGACGAACATGCAAACCTAGTTGCACCATCGTTCACGCACCCCCCTGC CGCCCTAGCCACTGTTTGCCCGCCAACAACGAGGTGTAGGTAGCAGGATG TCTCTAACCCGAAAACCCATCCCTTTTACCGTCACCACTAACCATGTGTC CGTACCGTGAAAAAACTGCCCACGTGCGGTCGGCGGCGGGGGGGGGCGGG GGGCGTGCTGCAGAGATGCCATCGCGGAGGCGTCGGTGTCTGGAGGCGGA GGGGAAGGGTCGGAGAGAGACGTGGTGGTGGTCTGCGGTACGGTGTTTAT GATGGTCGACATCAGGGAGGAGCTCGGCTTCGACGAGCCGAGGGTGAGAG CGAGCGCTCGGCGAAACGACGTATGCTTTAGCGCAGAACCGGGCAGGAAT GATGCTGTTGGGGGGGAATCTTAAGGATGACGCATGAAGGGCAAAGACAC GTAGAAAGGGGGGAAACATCCACAAGGGAGGCCATGCGAACGGAGATGCG GAGTGAAAATCTGAAACTGAGCAGCTAGTCCTTGGCGCGAACGAGCGACC GAGGGGCTAGTTTCTGCACCTATTTGGCGTATACCCCTTCCGGCTCTCCC CGTTGATACCTGTTCTGTACAGTCTCCACCACAATCACGGTTCGATCTGT GATTGGTCACAACAGTGTGAAAGCTTTTATGGTCGACAACAGCGCCGGGT TGGTTCCATCACAGACCCTGTCGCCTTTGAATTTGTCCTGATGTATCTTG ACCCGTGTCGCTTCGTGGCGTGTTTTGCTTTTCCACTCTCGGTGTGCGGT GTGTTTGACCAGGACTCAGCCGCCGCGGGAGAGGTGGGCGGATCGAGCAA CAGGGCAGCGCAGGTAAGGGGCTCCTGTCCTGGTACCCAAGAACCGCGGT ATTTCTTCCGTGCAATCTGAGAGATGAGTTGGAGTCAAATGGCACAAGTG CTGCGAGGAATATATGAAATGGCACAAGTGCCGCGAGCGCTGATTTCAAG TGGAGACCAACAACATCTAGTCCGCTAGTTTCTCCTTCACGCCCCATCGT CCTTGCCGCGACGACTATCATGCCCGTCAGGATAATCTGGCACGAACCGG CACGGACGGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7410:1709..7521-

>mRNA_Ecto-sp13_S_contig7410.18595.1 ID=mRNA_Ecto-sp13_S_contig7410.18595.1|Name=mRNA_Ecto-sp13_S_contig7410.18595.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1008bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7410:1709..7521- (Ectocarpus species13 EcNAP12_S_4_19m)
GGACGGTTGGACGGGACGAACATATTGAAGCCGGCTCTAACCGTCGTCAC
TTCCTCGGCTCTTTTGCTTGACCACACCAAGATCTTGGGAGACACGGTGG
AGCAAATCGCCCTCGAGAAGGCCGGGATTTTCAAGCCGGGCGTCCCCACT
CTCGTTGGCGACGGCTGTCCTGTCGATATCATGAGGGGCGTGGCCGAGAG
CAGAGGGTGCCCGTTCCACCGCTGGACAGACGCCTTCCCCGAAGGAACTA
ACGCCGGAGATGATGAAGATTACGACGAGGAGAACACCCGCCTGGCCGAG
GCCGGCCTGATACTGCTGGGCCGTTCCCACCCGAAGTTGTGCGTTAACGA
GGACGCCTTGCGCCGCGGCGTGACGCAGCGACCACCGTGCCGCTTCGAGG
TGCTCCAGGTAGACGCCCCCGCGGCGGCGGCGGCGGGGGCGGCCACCGGA
AAACAAGTCGAATCTTCATATAGCGAGGGAGTAGCCGGTGCCGGCGGCGG
GGGAAGCGGAGGCGGAGGCGTTGTCACGGTGGTGCTGGACGTTGCACACA
ACCCTCCGGCGATCGTTCGGTTTTTCCAGAAGGTGGCGAAGGAGTTCCCG
GGGAGGCGTATTCGTGTTGTGGCGGCATTTTCAGGCGACAAAGACTCCAA
GGATTGCCTCTCGACAATCTTGACAAGCGCTGCCCCCGAAAGGATACATC
TTGCCGAGGCAAGCCTCGCTGCCACTCGTCGAGCAACGTCGGTGGACGTC
TTAGCCTCGCGCCTTTCAGAGCTGTCCGGAGGGACGTTCGACTCGTCGTC
GAGCAGGGTGAGGAGGGGAGACGAGAGCGTGCGGCAAGCTTTAAGAGATG
CCATCGCGGAGGCGTCGGTGTCTGGAGGCGGAGGGGAAGGGTCGGAGAGA
GACGTGGTGGTGGTCTGCGGTACGGTGTTTATGATGGTCGACATCAGGGA
GGAGCTCGGCTTCGACGAGCCGAGGGATAATCTGGCACGAACCGGCACGG
ACGGGTGA
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