prot_Ecto-sp13_S_contig7409.18592.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7409.18592.1
Unique Nameprot_Ecto-sp13_S_contig7409.18592.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length552
Homology
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: A0A6H5K807_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K807_9PHAE)

HSP 1 Score: 925 bits (2391), Expect = 0.000e+0
Identity = 474/536 (88.43%), Postives = 488/536 (91.04%), Query Frame = 0
Query:    1 MEKRAKAFVVRALGTTFYYRARGPLSVFLREPFLSSYVLKGEFSALALNALSDHGNSFAILPGGVLVLSLDRESFQT------LGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCLSSCRWGSGGDGAAVDMVVYWCGSGGVGQGSGEGGEVAEAXXXXXXXXXXQAPEGCGQGVAAVRGSRKGECAEGEQEGQQSQQCCRDITFPPGFCAERVDLAPEIRFFREACCPDLDFVGQRLAATAPTPVERARRRGRKGIEATAFNSTPTAEKLVDGSDDGRSDHQFTDRRHPRLPPPLASQPESAKCLLVLDMFEWLGAVSCGLDAAVRRSPSPPEPYLSEFETPRHLRYRRDRIVCRARLRGFLPPVAVSRLVDAAGSAAAGVAALASAEDAAADDRQHYKSPHLLPVRRVVRDQGQQRPDGCSWGAVTSWPFRDAPRAYPGADAPCAGGQRSKRGGRKGSGRGGSEERCAKEWPVGGHGVYTIVACPGETTVAFVSAKCPG 530
            ME+RAKAFVVRALG TFYYRARGPLSV LRE FL SYVLKG FSALALNA SDHGNSFAILPGGVLVLSLDRESFQ       + LPGEAA TRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGK LHDRVLSCLSSCRWGSG DGAAVDMVV+WCGSGGVGQGSGEGGE+AEA          QAPEGCGQG AAV    KGECAEG+QEGQQSQQCCRDITFPPGF AERVDL P+IRFFREACCPDLDFVGQ LAATAPT V+RARR+GRKGIEATAFNST TAE LVDGSDDG SD  FTDRRHPRLPPP+ASQPESAKCLLVLDMFEWLGAVSCGLDAAVRRSPSPPEPYLS+FETPRHLRYRRDR+VCRARLRGFLPPVAVSR VDAAGSAAAGVAALASAED+AAD RQHY+SP LLPVRRVVRDQGQQRPDGCSWGAVTSWPFRDAPRAYPGADAPCAGGQRSKRG RKG G GGSEERCAKEWPVGGHGVYT+VACPGET VAFVSAKCPG
Sbjct:   95 MEERAKAFVVRALGKTFYYRARGPLSVLLRERFLDSYVLKGGFSALALNAPSDHGNSFAILPGGVLVLSLDRESFQASISGFRICLPGEAAATRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKPLHDRVLSCLSSCRWGSGDDGAAVDMVVHWCGSGGVGQGSGEGGELAEAESSGTSEASGQAPEGCGQGAAAVGRRPKGECAEGKQEGQQSQQCCRDITFPPGFSAERVDLTPDIRFFREACCPDLDFVGQGLAATAPTTVQRARRKGRKGIEATAFNSTSTAENLVDGSDDGGSDDHFTDRRHPRLPPPVASQPESAKCLLVLDMFEWLGAVSCGLDAAVRRSPSPPEPYLSKFETPRHLRYRRDRVVCRARLRGFLPPVAVSRFVDAAGSAAAGVAALASAEDSAADGRQHYESPQLLPVRRVVRDQGQQRPDGCSWGAVTSWPFRDAPRAYPGADAPCAGGQRSKRGARKGRGGGGSEERCAKEWPVGGHGVYTVVACPGETAVAFVSAKCPG 630          
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: A0A835ZFG0_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.170e-13
Identity = 50/115 (43.48%), Postives = 63/115 (54.78%), Query Frame = 0
Query:   55 GNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCLSSCRWGSGGDGAAVDMVVYWCGSG 169
            G +FA+LPGG LV SLDRE+FQTLGLP +A   RP    +R        GG           P RY  + DL +KSFRPGK LHDR++ CL+         GA  + ++ W G G
Sbjct:   19 GATFAVLPGGKLVYSLDREAFQTLGLPAKAV--RPASTSRR-------PGGDK---------PRRYFGSADLHSKSFRPGKPLHDRLVQCLAK--------GARAETMLVWDGGG 107          
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: A0A0L0HUD1_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HUD1_SPIPD)

HSP 1 Score: 77.0 bits (188), Expect = 1.540e-11
Identity = 44/130 (33.85%), Postives = 74/130 (56.92%), Query Frame = 0
Query:   17 FYYRARGPLSVFLREPFLSSYVLKGEFSALALNALSDHGNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCLS 146
            FYY+A  PLS F++  F+++Y+ KG F+AL  NA +D  ++FA+LP G LV+S+ +++++TLGL G   P++   KG                        +RY   +DL+  +F+P  +L++RV  C +
Sbjct:   61 FYYKASVPLSFFIQPDFVNNYIRKGGFTALRSNAKADIDDTFALLPSGRLVMSVKKDTYETLGLVGR--PSKFGDKG------------------------NRYFIHIDLAQPAFKPKGKLYERVKWCFT 164          
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: A0A8K0C6D9_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0C6D9_9COLE)

HSP 1 Score: 69.7 bits (169), Expect = 3.620e-9
Identity = 45/160 (28.12%), Postives = 73/160 (45.62%), Query Frame = 0
Query:    8 FVVRALGTTFYYRARGPLSV--FLREPFLSSYVLKGEFSALALNALSDHGNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCLSSCRWGSGGDGAAVDMVVYW 165
            F+  AL T   Y     LS+   + + F+++++ KG F  L++N   D  +   I P G++VLSL + ++QTLGL G  +    N K                         DRY+  VDL   SF PGK+ ++R   CL   +         +++++YW
Sbjct:   54 FLNEALTTDCEYYKLSNLSISELINKNFINNFIKKGSFIGLSINTRIDCDDCICITPNGLIVLSLTKTTYQTLGLDGRVSHFHRNTK-------------------------DRYIVHVDLLKDSFEPGKKNYERTKICLEKLK--------DINLLIYW 180          
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: UPI000A2A93AC (ribonuclease P protein subunit p40 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A93AC)

HSP 1 Score: 67.8 bits (164), Expect = 1.560e-8
Identity = 36/122 (29.51%), Postives = 62/122 (50.82%), Query Frame = 0
Query:   24 PLSVFLREPFLSSYVLKGEFSALALNALSDHGNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCL 145
            P+ VF+ + F+  ++ +G+F A++     D GN  A+LP G+L+LSLD+++++ LGL G+ +  +                              R++  +DL A SF PGK  ++RV  CL
Sbjct:   73 PVHVFIEKDFIDKFIKQGQFYAVSTKTCIDTGNCVAVLPTGILILSLDKDTYEELGLTGKHSIFQKK---------------------------MRFIVEIDLKAASFHPGKSHYERVSWCL 167          
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: UPI0009E200B4 (ribonuclease P protein subunit p40-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E200B4)

HSP 1 Score: 67.4 bits (163), Expect = 2.140e-8
Identity = 38/122 (31.15%), Postives = 62/122 (50.82%), Query Frame = 0
Query:   24 PLSVFLREPFLSSYVLKGEFSALALNALSDHGNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCL 145
            P+  F  E F+ +++  G+F AL+     D GN  A+LP GVL+LSLD+++++ LGL G+ +  +                              R++  V+L+A  F PGK+L++RV  CL
Sbjct:   73 PVHAFTEEEFIRTFIKTGQFIALSWETRIDSGNCVAVLPTGVLILSLDKDTYEQLGLTGKPSAFQKK---------------------------HRFIVEVNLAAPYFVPGKKLYERVRWCL 167          
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: A0A0H5RAF3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RAF3_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 2.150e-8
Identity = 40/129 (31.01%), Postives = 62/129 (48.06%), Query Frame = 0
Query:   17 FYYRARGPLSVFLREPFLSSYVLKGEFSALALNALSDHGNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCL 145
            F Y+ + P+++ L   F+  Y+ +GE SA++ +A  D  N  AILP G L LS+D+E++ +LGL G+    R                              R    +D+   SFRPG+ L+ RVL C+
Sbjct:   52 FAYKVQLPIALLLEPSFIEKYIRQGELSAISYDAHIDRDNVVAILPNGFLCLSVDKETYHSLGLVGKRCQIRNRES-------------------------TRLDITIDMRDPSFRPGQSLYKRVLWCV 155          
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: A0A1Y1HUR6_KLENI (Ribonucleases P/MRP protein subunit RPP40 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUR6_KLENI)

HSP 1 Score: 67.4 bits (163), Expect = 2.650e-8
Identity = 46/138 (33.33%), Postives = 69/138 (50.00%), Query Frame = 0
Query:   12 ALGTT--FYYRARGPLSVFLREPFLSSYVLKG-EFSALALNALSDHGNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCLS 146
            ALGT   F+   R PLS F+   F+S+YV    EF A++     D  ++  + P G L L+L ++S++TLGL G  +  +P+                           +R+   +DL AKSF PG++LHDRV  CL+
Sbjct:   23 ALGTPQPFFQGFRAPLSTFVSPHFVSTYVKSAAEFVAISNATPIDRTDAATVSPDGKLHLALTKQSYETLGLVGTTSAFQPH---------------------------NRHNVTIDLRAKSFVPGRKLHDRVQECLT 133          
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: A0A834XXY3_9HYME (Uncharacterized protein n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834XXY3_9HYME)

HSP 1 Score: 66.6 bits (161), Expect = 3.650e-8
Identity = 41/131 (31.30%), Postives = 66/131 (50.38%), Query Frame = 0
Query:   18 YYRARG-PLSVFLREPFLSSYVLKGEFSALALNALSDHGNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCLSS 147
            YY+  G   S  + + F+ ++V KGE S L++N   D  N   I P G+L+LSL+ E FQ+LG+ G+ +    N +                          RYV  ++L+ ++F PGK+ ++RV SCL +
Sbjct:   65 YYKVEGVTASQLVNKEFIEAFVKKGELSLLSVNVKIDLDNVITITPNGILILSLNIEDFQSLGIEGKLSYFDRNKQ-------------------------TRYVVEINLNEETFTPGKKNYERVRSCLEN 170          
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Match: UPI00077B257E (ribonuclease P protein subunit p40-like isoform X1 n=5 Tax=Acropora TaxID=6127 RepID=UPI00077B257E)

HSP 1 Score: 66.2 bits (160), Expect = 4.720e-8
Identity = 38/122 (31.15%), Postives = 59/122 (48.36%), Query Frame = 0
Query:   24 PLSVFLREPFLSSYVLKGEFSALALNALSDHGNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCL 145
            PL  F+   F+ ++V  G+F AL+     D GN  A+LP G L+LSL++++++ LGL G+ +  +                              R++  VDL A  F PGK+ +DRV  CL
Sbjct:   73 PLHAFIETDFIKTFVKDGQFVALSWETRIDTGNCVAVLPNGTLILSLNKDTYEQLGLTGKPSAFQKK---------------------------QRFIVEVDLKAPHFVPGKKNYDRVKWCL 167          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7409.18592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K807_9PHAE0.000e+088.43Cyclic nucleotide-binding domain-containing protei... [more]
A0A835ZFG0_9STRA7.170e-1343.48Ribonuclease P n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A0L0HUD1_SPIPD1.540e-1133.85Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A8K0C6D9_9COLE3.620e-928.13Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
UPI000A2A93AC1.560e-829.51ribonuclease P protein subunit p40 n=1 Tax=Exaipta... [more]
UPI0009E200B42.140e-831.15ribonuclease P protein subunit p40-like n=1 Tax=Or... [more]
A0A0H5RAF3_9EUKA2.150e-831.01Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A1Y1HUR6_KLENI2.650e-833.33Ribonucleases P/MRP protein subunit RPP40 n=1 Tax=... [more]
A0A834XXY3_9HYME3.650e-831.30Uncharacterized protein n=1 Tax=Aphidius gifuensis... [more]
UPI00077B257E4.720e-831.15ribonuclease P protein subunit p40-like isoform X1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013893Ribonuclease P, Rpp40PFAMPF08584Ribonuc_P_40coord: 28..148
e-value: 3.4E-17
score: 62.7
coord: 332..465
e-value: 1.6E-7
score: 30.9
IPR013893Ribonuclease P, Rpp40PANTHERPTHR15396FAMILY NOT NAMEDcoord: 17..520
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 14..78
score: 7.945

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7409contigEcto-sp13_S_contig7409:5518..7389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7409.18592.1mRNA_Ecto-sp13_S_contig7409.18592.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7409 5089..7401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7409.18592.1 ID=prot_Ecto-sp13_S_contig7409.18592.1|Name=mRNA_Ecto-sp13_S_contig7409.18592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=552bp
MEKRAKAFVVRALGTTFYYRARGPLSVFLREPFLSSYVLKGEFSALALNA
LSDHGNSFAILPGGVLVLSLDRESFQTLGLPGEAAPTRPNGKGKRAGAGA
GSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKQLHDRVLSCLSSCRW
GSGGDGAAVDMVVYWCGSGGVGQGSGEGGEVAEAGSSGTSEASGQAPEGC
GQGVAAVRGSRKGECAEGEQEGQQSQQCCRDITFPPGFCAERVDLAPEIR
FFREACCPDLDFVGQRLAATAPTPVERARRRGRKGIEATAFNSTPTAEKL
VDGSDDGRSDHQFTDRRHPRLPPPLASQPESAKCLLVLDMFEWLGAVSCG
LDAAVRRSPSPPEPYLSEFETPRHLRYRRDRIVCRARLRGFLPPVAVSRL
VDAAGSAAAGVAALASAEDAAADDRQHYKSPHLLPVRRVVRDQGQQRPDG
CSWGAVTSWPFRDAPRAYPGADAPCAGGQRSKRGGRKGSGRGGSEERCAK
EWPVGGHGVYTIVACPGETTVAFVSAKCPGSRVKPIHPWLTQQSTTGRCK
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013893RNase_P_Rpp40
IPR000595cNMP-bd_dom