prot_Ecto-sp13_S_contig74087.18590.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig74087.18590.1
Unique Nameprot_Ecto-sp13_S_contig74087.18590.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length54
Homology
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BLAST of mRNA_Ecto-sp13_S_contig74087.18590.1 vs. uniprot
Match: Q8QNL3_ESV1K (EsV-1-54 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNL3_ESV1K)

HSP 1 Score: 109 bits (273), Expect = 1.940e-30
Identity = 48/53 (90.57%), Postives = 48/53 (90.57%), Query Frame = 0 
Query:    1 SHGHDFFHSLEAGRWPPAQHPKRIPFNHWISLGIIHRGHRDVPIEPVLHFRVH 53
            SHGHDF HSLEAGRWPPAQHPKRI FNHWISLGIIHRGH DV IEPVLH RVH
Sbjct:    2 SHGHDFSHSLEAGRWPPAQHPKRISFNHWISLGIIHRGHCDVSIEPVLHLRVH 54
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BLAST of mRNA_Ecto-sp13_S_contig74087.18590.1 vs. uniprot
Match: D8LP87_ECTSI (EsV-1-54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP87_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.110e-29
Identity = 47/53 (88.68%), Postives = 47/53 (88.68%), Query Frame = 0 
Query:    1 SHGHDFFHSLEAGRWPPAQHPKRIPFNHWISLGIIHRGHRDVPIEPVLHFRVH 53
            SHGHDF HSLEAGRWPPAQHPKRI  NHWISLGIIHRGHRDV IEPVLH  VH
Sbjct:    2 SHGHDFSHSLEAGRWPPAQHPKRISSNHWISLGIIHRGHRDVTIEPVLHLTVH 54
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig74087.18590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QNL3_ESV1K1.940e-3090.57EsV-1-54 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LP87_ECTSI1.110e-2988.68EsV-1-54 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig74087contigEcto-sp13_S_contig74087:292..453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig74087.18590.1mRNA_Ecto-sp13_S_contig74087.18590.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig74087 292..453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig74087.18590.1 ID=prot_Ecto-sp13_S_contig74087.18590.1|Name=mRNA_Ecto-sp13_S_contig74087.18590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=54bp
SHGHDFFHSLEAGRWPPAQHPKRIPFNHWISLGIIHRGHRDVPIEPVLHF
RVH*
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