mRNA_Ecto-sp13_S_contig74046.18587.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig74046.18587.1
Unique NamemRNA_Ecto-sp13_S_contig74046.18587.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 5.210e-145
Identity = 204/218 (93.58%), Postives = 210/218 (96.33%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKLH 654
            HRRLGHLNARSLD LRKDT TGVD RD+LSPC VCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT+MKEVYLLRKKSDTTEAVHTYNMCVAAAGG RIETIRCDKGGENTGSE R+ CKNSA+KLE AATNTPQQ+GVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPY+KLH
Sbjct:   46 HRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLH 263
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 426 bits (1096), Expect = 5.110e-144
Identity = 204/218 (93.58%), Postives = 210/218 (96.33%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKLH 654
            HRRLGHLNARSLD LRKDT TGVD RD+LSPC VCQIAKHKQSPHPKQSTRE+SRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT+MKEVYLLRKKSDTTEAVHTYNMCVAAAGG RIETIRCDKGGENTGSE R+YCKNSA+KLE AATNTPQQIG SERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPY+KLH
Sbjct:  422 HRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLH 639
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 8.520e-144
Identity = 206/218 (94.50%), Postives = 211/218 (96.79%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKLH 654
            HRRLGHLNARSLD LRKDT TGVD RD+LSPC VCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT+MKEVYLLRKKSDTTEAVHTYNMCVAAAGG RIETIRCDKGGENTGSE R+YCKNSA+KLE AATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPY+KLH
Sbjct:   46 HRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLH 263
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 422 bits (1085), Expect = 4.750e-143
Identity = 203/217 (93.55%), Postives = 209/217 (96.31%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKL 651
            HRRLGHLNARSLD LRKDT T VD RD+LSPC VCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACK+TDDYT+MKEVYLLRKKSDTTEAVHTYNMCVAAAGG RIETIRCDKGGENTGSE R+YCKNSA+KLE AATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPY+KL
Sbjct:  370 HRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKL 586
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 4.990e-142
Identity = 205/218 (94.04%), Postives = 210/218 (96.33%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKLH 654
            HRRLGHLNARSLD LRKDT TGVD RD+LSPC VCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT+MKEVYLLRKKSDTTEAVHTYNMCVAAAGG RIETIRCDKGGENTGSE R+YCKNSA+KLE AATNTPQQIG SERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPY+KLH
Sbjct:   46 HRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLH 263
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 1.320e-140
Identity = 206/218 (94.50%), Postives = 211/218 (96.79%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKLH 654
            HRRLGHLNARSLD LRKDT TGVD RD+LSPC VCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT+MKEVYLLRKKSDTTEAVHTYNMCVAAAGG RIETIRCDKGGENTGSE R+YCKNSA+KLE AATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPY+KLH
Sbjct:   46 HRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLH 263
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 428 bits (1100), Expect = 2.660e-140
Identity = 206/218 (94.50%), Postives = 210/218 (96.33%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKLH 654
            HRRLGHLNARSLDTLRKDT TGVD RD+LSPC VCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT+MKEVYLLRKKSDTTEAVHTYNMCVAAAGG RIETIRCDKGGEN GSE RNYCKNSA+KLE AATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRS HSALGGATPY+KLH
Sbjct:  387 HRRLGHLNARSLDTLRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSALGGATPYSKLH 604
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 5.800e-140
Identity = 206/218 (94.50%), Postives = 211/218 (96.79%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKLH 654
            HRRLGHLNARSLD LRKDT TGVD RD+LSPC VCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT+MKEVYLLRKKSDTTEAVHTYNMCVAAAGG RIETIRCDKGGENTGSE R+YCKNSA+KLE AATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPY+KLH
Sbjct:   46 HRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLH 263
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 421 bits (1081), Expect = 1.050e-138
Identity = 202/218 (92.66%), Postives = 208/218 (95.41%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKLH 654
            HRRLGHLNARSLD LRKDT TGVD RD+LSPC VCQIAKHKQSPHPKQSTRELSR GQLVVIDNMGP NPPAKY+GGSFPYACKITDDYT+MKEVYLLRKKSDTTEAVHTYNMCVAAAGG RIE IRCDKGGENTGSE R+YCKNSA+KLE AATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPY+KLH
Sbjct:  242 HRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRSGQLVVIDNMGPANPPAKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLH 459
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 1.030e-136
Identity = 200/218 (91.74%), Postives = 210/218 (96.33%), Query Frame = 1 
Query:    1 HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRKKSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKLENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYAKLH 654
            HRRLGHLNARSLD LRKDT TGVD RD+LSPC VCQIAK+KQSPHPKQSTRELSRPGQLVVIDN+GPVNPPAKY GGSFPYACKITDDYT++KEVYLLRKKS+TTEAVHTYN+CVAAAGG RIETIRCDKGGENTGSE R+YCKNSA+KLE AATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPY+KLH
Sbjct:   46 HRRLGHLNARSLDILRKDTGTGVDFRDSLSPCGVCQIAKYKQSPHPKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLH 263
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig74046.18587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCM0_9PHAE5.210e-14593.58Integrase catalytic domain-containing protein n=5 ... [more]
A0A6H5KT84_9PHAE5.110e-14493.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K500_9PHAE8.520e-14494.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVF6_9PHAE4.750e-14393.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K1R7_9PHAE4.990e-14294.04Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JJR8_9PHAE1.320e-14094.50Integrase catalytic domain-containing protein n=11... [more]
A0A6H5J8P7_9PHAE2.660e-14094.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCT3_9PHAE5.800e-14094.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JSL6_9PHAE1.050e-13892.66Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRJ1_9PHAE1.030e-13691.74Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig74046contigEcto-sp13_S_contig74046:3..656 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeViridiplantae
Stop0
Start0
Seed ortholog score134.8
Seed ortholog evalue4.8e-29
Seed eggNOG ortholog4530.OS11T0656500-01
Model size654
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37THH@33090,3GG2K@35493,3IKX9@38820,3M2IR@4447,COG2801@1,KOG0017@2759
Cds size654
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464010.000572-CDS-Ecto-sp13_S_contig74046:2..6561681464010.000572-CDS-Ecto-sp13_S_contig74046:2..656Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig74046 3..656 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig74046.18587.1prot_Ecto-sp13_S_contig74046.18587.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig74046 3..656 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig74046.18587.1

>prot_Ecto-sp13_S_contig74046.18587.1 ID=prot_Ecto-sp13_S_contig74046.18587.1|Name=mRNA_Ecto-sp13_S_contig74046.18587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=218bp
HRRLGHLNARSLDTLRKDTDTGVDCRDNLSPCRVCQIAKHKQSPHPKQST
RELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTRMKEVYLLRK
KSDTTEAVHTYNMCVAAAGGSRIETIRCDKGGENTGSELRNYCKNSAVKL
ENAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLL
NRSPHSALGGATPYAKLH
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mRNA from alignment at Ecto-sp13_S_contig74046:3..656+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig74046.18587.1 ID=mRNA_Ecto-sp13_S_contig74046.18587.1|Name=mRNA_Ecto-sp13_S_contig74046.18587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=654bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74046:3..656+ (Ectocarpus species13 EcNAP12_S_4_19m)
CACAGGAGGCTTGGACATCTCAATGCTCGGAGCCTGGACACCCTTCGGAA
GGACACGGATACCGGGGTGGACTGTCGCGACAATCTCTCCCCTTGCCGGG
TCTGCCAGATCGCGAAACACAAGCAGTCCCCCCACCCGAAGCAATCGACT
CGCGAACTATCACGGCCTGGACAGCTTGTGGTTATCGACAACATGGGGCC
TGTTAATCCACCTGCGAAATATAAAGGAGGCTCCTTCCCGTACGCGTGCA
AGATCACCGACGACTACACGAGGATGAAAGAAGTGTACCTGCTTCGCAAG
AAATCTGACACGACCGAGGCGGTGCACACGTACAACATGTGCGTCGCAGC
GGCAGGAGGCTCCCGGATCGAGACCATCCGCTGCGACAAGGGAGGCGAGA
ACACCGGATCCGAACTTCGGAACTACTGCAAGAATTCAGCTGTCAAGCTC
GAAAACGCCGCCACCAACACCCCTCAACAAATTGGTGTATCGGAACGGGA
CGGACAAACCCTGGCCGGAGTCACCCGGTGTCTTCTGAAGGATGGAGATT
TTCCGCCGTCCATGTGGGGGGAGTTAATGCTAACTGCAGCATACCTGTTG
AACAGGTCCCCACACTCAGCACTGGGAGGAGCTACGCCATACGCGAAGTT
GCAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig74046:3..656+

>mRNA_Ecto-sp13_S_contig74046.18587.1 ID=mRNA_Ecto-sp13_S_contig74046.18587.1|Name=mRNA_Ecto-sp13_S_contig74046.18587.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=654bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74046:3..656+ (Ectocarpus species13 EcNAP12_S_4_19m)
CACAGGAGGCTTGGACATCTCAATGCTCGGAGCCTGGACACCCTTCGGAA
GGACACGGATACCGGGGTGGACTGTCGCGACAATCTCTCCCCTTGCCGGG
TCTGCCAGATCGCGAAACACAAGCAGTCCCCCCACCCGAAGCAATCGACT
CGCGAACTATCACGGCCTGGACAGCTTGTGGTTATCGACAACATGGGGCC
TGTTAATCCACCTGCGAAATATAAAGGAGGCTCCTTCCCGTACGCGTGCA
AGATCACCGACGACTACACGAGGATGAAAGAAGTGTACCTGCTTCGCAAG
AAATCTGACACGACCGAGGCGGTGCACACGTACAACATGTGCGTCGCAGC
GGCAGGAGGCTCCCGGATCGAGACCATCCGCTGCGACAAGGGAGGCGAGA
ACACCGGATCCGAACTTCGGAACTACTGCAAGAATTCAGCTGTCAAGCTC
GAAAACGCCGCCACCAACACCCCTCAACAAATTGGTGTATCGGAACGGGA
CGGACAAACCCTGGCCGGAGTCACCCGGTGTCTTCTGAAGGATGGAGATT
TTCCGCCGTCCATGTGGGGGGAGTTAATGCTAACTGCAGCATACCTGTTG
AACAGGTCCCCACACTCAGCACTGGGAGGAGCTACGCCATACGCGAAGTT
GCAC
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