mRNA_Ecto-sp13_S_contig74.18579.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig74.18579.1
Unique NamemRNA_Ecto-sp13_S_contig74.18579.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: D7FMH2_ECTSI (RibD_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH2_ECTSI)

HSP 1 Score: 502 bits (1292), Expect = 3.730e-173
Identity = 283/324 (87.35%), Postives = 290/324 (89.51%), Query Frame = 1 
Query:   13 MRLDVWTAAVAFYVLPQETLSEFAVAGLCQEGSLDARVFRVRPPCPSSSICRGNSNGDVAATAMDRDIAKQHEAGPPRTSSEATQSKHKAPAAXXXXXXXXXXGRAGEXXXXXXXEATAVGTPMAEGATRFERGGAALTESRGGGRGMPSVTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGHSSLVFYSAGCEDTEARAAELKAGVKRSRATVSDSSGETEPGTSHQRLSPVDFVGLPVQRPGAGVDLSGVLEALFE 984
            MRLDVWTAAVAF VLPQETLSEFAVAG  ++GSLDA VFRVRP CPSSS  RGNSNGDVAATAMDR+IAK HEAGPPR SSE TQSKH APAA   XXXXXX GRAGE  XXXXX     G PMAEGATRFERGGAA+TESRG GRGMPSVTLKLAMDRNGAVDDMSEGPKRFTS ASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLN GQTRQPTRVVLDRTLRLTGAQAGQNPRAIL DGHSSLVFYSAGCEDTEARAAELKA VKRSR  VSDS GETEP TSHQ+L+PVDFVG+PVQRPGAGVDLSGVL AL E
Sbjct:    1 MRLDVWTAAVAFSVLPQETLSEFAVAGR-RQGSLDAGVFRVRPSCPSSSSYRGNSNGDVAATAMDRNIAKHHEAGPPRISSETTQSKHVAPAAAAAXXXXXX-GRAGEAEXXXXXXXXXXGAPMAEGATRFERGGAAVTESRGRGRGMPSVTLKLAMDRNGAVDDMSEGPKRFTSPASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNGGQTRQPTRVVLDRTLRLTGAQAGQNPRAILRDGHSSLVFYSAGCEDTEARAAELKADVKRSRTAVSDSPGETEPDTSHQKLAPVDFVGMPVQRPGAGVDLSGVLGALLE 322
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BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: A0A836CBN8_9STRA (Riboflavin biosynthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN8_9STRA)

HSP 1 Score: 130 bits (326), Expect = 4.780e-31
Identity = 78/137 (56.93%), Postives = 95/137 (69.34%), Query Frame = 1 
Query:  424 LTESRGGGRGMPSVTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGH-SSLVFYSAGCEDTEARAAELKAGV 831
            +  + G     P VTLKLA+D+ GAVDD SE PKRFTS  SLDAVHR+RRD  AV+VGV TVVRD+PSLTVRRVPL +GQ +QP RVVLDR LR+  A   Q    +L DGH ++++F +      +ARAAEL   V
Sbjct:    1 MAANGGAASSRPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQ-QQPLRVVLDRNLRIPEADQCQ----LLSDGHPTAVLFTNTPGTFVKARAAELMLSV 132
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BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: I2CPJ6_NANGC (Riboflavin biosynthesis protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ6_NANGC)

HSP 1 Score: 122 bits (307), Expect = 2.800e-28
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1 
Query:  457 PSVTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGHSSLVFYSAG 786
            P VT+KLA+DR GAVDD +  P RFT +ASLDAVHR+RR+ EAV+VGV TVVRDDPSLTVRRVPL   Q RQP RVVLDR+LR+  +        +L D H +LV+Y  G
Sbjct:   21 PRVTVKLAVDRKGAVDDATLKPGRFTCEASLDAVHRLRRESEAVVVGVETVVRDDPSLTVRRVPLRPDQ-RQPIRVVLDRSLRIPYSST------LLNDRHRTLVYYVQG 123
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BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: A0A7S1GRL0_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GRL0_HEMAN)

HSP 1 Score: 114 bits (285), Expect = 4.590e-26
Identity = 61/83 (73.49%), Postives = 67/83 (80.72%), Query Frame = 1 
Query:  457 PSVTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLR 705
            P+VTLK+A+D N AVDD +   KRFTS ASLDAVHR+RRD  AVLVGVGTV RDDP LTVRRVPL EGQ  QP RVVLD +LR
Sbjct:   70 PTVTLKIAIDTNWAVDDAALTAKRFTSPASLDAVHRLRRDSSAVLVGVGTVCRDDPGLTVRRVPLREGQ-EQPLRVVLDPSLR 151
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BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: A0A6U6BWZ9_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BWZ9_GUITH)

HSP 1 Score: 117 bits (293), Expect = 8.140e-26
Identity = 61/109 (55.96%), Postives = 82/109 (75.23%), Query Frame = 1 
Query:  454 MPSVTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGHSSLVFYS 780
            +P VTLK+A+D NGAVDD+    KRFTS+ SLDAVHR+RR  +AVLVG+GTVVRDDPSLTVRRVPL EG+  QP R V+D +L++      +    ++ DG+ +++F+S
Sbjct:   77 LPIVTLKIALDENGAVDDLGITSKRFTSEQSLDAVHRLRRCSDAVLVGIGTVVRDDPSLTVRRVPLLEGR-EQPLRAVIDPSLKI------EAHCKVMRDGYKTVIFHS 178
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BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: A0A832V5V4_9ARCH (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=2 Tax=Archaea TaxID=2157 RepID=A0A832V5V4_9ARCH)

HSP 1 Score: 118 bits (296), Expect = 1.030e-25
Identity = 63/114 (55.26%), Postives = 83/114 (72.81%), Query Frame = 1 
Query:  454 MPSVTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGHSSLVFYSAGCED 795
            +P VTLK+A+D+NGAVDD +E   RFTSQ SLDAVHR+R+D +A++VGVGTV+RD+PSLTVRR+ L EG+  QP RVVLDR L+            I+ D H +L+F+  G E+
Sbjct:  155 IPLVTLKVAIDKNGAVDDRAEDSFRFTSQESLDAVHRLRKDVDAIIVGVGTVLRDNPSLTVRRIELGEGK--QPLRVVLDRELKTP------IDSIIVNDDHDTLIFHVEGREE 260
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BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: A0A7C7HSY4_9ARCH (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=4 Tax=Archaea TaxID=2157 RepID=A0A7C7HSY4_9ARCH)

HSP 1 Score: 117 bits (294), Expect = 1.870e-25
Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = 1 
Query:  457 PSVTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGHSSLVFYSAG 786
            P VTLK+A DRNGAVDD++   KRFTS  SLDAVHR+RRDC+A+++GV T+VRD+PSLTVRR+ L  G  RQP R++LDR LR            +L D H +++ ++ G
Sbjct:  154 PLVTLKIATDRNGAVDDLALASKRFTSPDSLDAVHRLRRDCDAIIIGVETIVRDNPSLTVRRIELGHG--RQPVRIILDRALRTP------LDSTVLADEHQTMILHTEG 255
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BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: A0A075GPM0_9EURY (Riboflavin biosynthesis protein (RibD) n=1 Tax=uncultured marine group II/III euryarchaeote KM3_178_D06 TaxID=1457940 RepID=A0A075GPM0_9EURY)

HSP 1 Score: 115 bits (288), Expect = 9.730e-25
Identity = 59/115 (51.30%), Postives = 79/115 (68.70%), Query Frame = 1 
Query:  448 RGMPSVTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGHSSLVFYSAGCE 792
            R  P VTLK A+DRNG VD   + P RFTS+ SLDAVH +RR C+AV+VGV TV+RDDP LTVRRVP+ +G+  QP R++LDR LR            ++ DG ++++F+S G +
Sbjct:  154 RRRPLVTLKAAIDRNGRVDSEHDAPGRFTSEESLDAVHELRRRCDAVVVGVNTVIRDDPELTVRRVPIGKGK--QPLRIILDRRLRTP------TDSKLVSDGGNTIIFHSEGTD 260
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BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: A0A7S4EBC2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBC2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.670e-24
Identity = 66/104 (63.46%), Postives = 75/104 (72.12%), Query Frame = 1 
Query:  463 VTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGHSSLVF 774
            VTLKLAMDRNGAVDD+ +  +RFTS ASLDAVHR+RR C+AVLVG  TV RDDPSLTVRRVPL   +T QP RVVL R      A AG     +L DG  ++VF
Sbjct:   65 VTLKLAMDRNGAVDDLGDKAERFTSPASLDAVHRLRRHCDAVLVGASTVARDDPSLTVRRVPLAP-RTAQPLRVVLGRA----PADAG-----LLTDGLETVVF 158
[Close]
BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Match: A0A842P3K4_9EURY (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A842P3K4_9EURY)

HSP 1 Score: 110 bits (276), Expect = 4.300e-23
Identity = 56/113 (49.56%), Postives = 81/113 (71.68%), Query Frame = 1 
Query:  454 MPSVTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGHSSLVFYSAGCE 792
            +P VTLK+A+D NGAVDD +E   RFTS+ SL+AVHR+R+D +A++VG+GT++RD+PSLTVRR+ +  G+  QP RV+LDR L+            I+ DGH++L+ +  G E
Sbjct:  143 IPLVTLKIAVDSNGAVDDRAEDSFRFTSEESLNAVHRLRKDVDAIIVGIGTIIRDNPSLTVRRIEMGLGK--QPLRVILDRELKTP------LDSTIVNDGHNTLILHVEGRE 247
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig74.18579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMH2_ECTSI3.730e-17387.35RibD_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A836CBN8_9STRA4.780e-3156.93Riboflavin biosynthesis protein n=1 Tax=Tribonema ... [more]
I2CPJ6_NANGC2.800e-2861.82Riboflavin biosynthesis protein n=1 Tax=Nannochlor... [more]
A0A7S1GRL0_HEMAN4.590e-2673.49Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6U6BWZ9_GUITH8.140e-2655.96Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A832V5V4_9ARCH1.030e-2555.26Bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
A0A7C7HSY4_9ARCH1.870e-2553.64Bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
A0A075GPM0_9EURY9.730e-2551.30Riboflavin biosynthesis protein (RibD) n=1 Tax=unc... [more]
A0A7S4EBC2_9STRA1.670e-2463.46Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A842P3K4_9EURY4.300e-2349.56Bifunctional diaminohydroxyphosphoribosylaminopyri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig74contigEcto-sp13_S_contig74:23980..29705 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score507.7
Seed ortholog evalue5.4e-141
Seed eggNOG ortholog2880.D7FMH2
Model size1477
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.RibD C-terminal domain
EggNOG OGs2CYVK@1,2S6R1@2759
Ec32 ortholog descriptionBacterial bifunctional deaminase-reductase, C-terminal
Ec32 orthologEc-23_000290.1
Cds size1284
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig74.18579.1prot_Ecto-sp13_S_contig74.18579.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig74 24161..29693 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464008.8198473-UTR-Ecto-sp13_S_contig74:23979..241601681464008.8198473-UTR-Ecto-sp13_S_contig74:23979..24160Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig74 23980..24160 -
1681464008.9457722-UTR-Ecto-sp13_S_contig74:29693..297051681464008.9457722-UTR-Ecto-sp13_S_contig74:29693..29705Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig74 29694..29705 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464008.8527825-CDS-Ecto-sp13_S_contig74:24160..244721681464008.8527825-CDS-Ecto-sp13_S_contig74:24160..24472Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig74 24161..24472 -
1681464008.8721185-CDS-Ecto-sp13_S_contig74:27011..272011681464008.8721185-CDS-Ecto-sp13_S_contig74:27011..27201Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig74 27012..27201 -
1681464008.893165-CDS-Ecto-sp13_S_contig74:27513..276741681464008.893165-CDS-Ecto-sp13_S_contig74:27513..27674Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig74 27514..27674 -
1681464008.9111743-CDS-Ecto-sp13_S_contig74:28163..282401681464008.9111743-CDS-Ecto-sp13_S_contig74:28163..28240Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig74 28164..28240 -
1681464008.922828-CDS-Ecto-sp13_S_contig74:28734..290611681464008.922828-CDS-Ecto-sp13_S_contig74:28734..29061Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig74 28735..29061 -
1681464008.9340694-CDS-Ecto-sp13_S_contig74:29476..296931681464008.9340694-CDS-Ecto-sp13_S_contig74:29476..29693Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig74 29477..29693 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig74.18579.1

>prot_Ecto-sp13_S_contig74.18579.1 ID=prot_Ecto-sp13_S_contig74.18579.1|Name=mRNA_Ecto-sp13_S_contig74.18579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=428bp
MRLDVWTAAVAFYVLPQETLSEFAVAGLCQEGSLDARVFRVRPPCPSSSI
CRGNSNGDVAATAMDRDIAKQHEAGPPRTSSEATQSKHKAPAAAAAAAAA
ATTGRAGEAEAARAAEATAVGTPMAEGATRFERGGAALTESRGGGRGMPS
VTLKLAMDRNGAVDDMSEGPKRFTSQASLDAVHRIRRDCEAVLVGVGTVV
RDDPSLTVRRVPLNEGQTRQPTRVVLDRTLRLTGAQAGQNPRAILGDGHS
SLVFYSAGCEDTEARAAELKAGVKRSRATVSDSSGETEPGTSHQRLSPVD
FVGLPVQRPGAGVDLSGVLEALFEGWVRAPWLHQVGRRRSGVLDSTGAWL
ARGGGWHLALIFLVAEVCCEAVVRIVLLLALVFSVFPLARMHERAPIRGG
GSVELCKGGMKTLKHHQQEGCRPRKIE*
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mRNA from alignment at Ecto-sp13_S_contig74:23980..29705-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig74.18579.1 ID=mRNA_Ecto-sp13_S_contig74.18579.1|Name=mRNA_Ecto-sp13_S_contig74.18579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74:23980..29705- (Ectocarpus species13 EcNAP12_S_4_19m)
GACCGGGGCTGCATGAGGCTTGACGTATGGACTGCAGCAGTTGCTTTTTA
TGTGCTTCCGCAAGAGACGTTGTCGGAGTTCGCAGTTGCCGGTCTTTGTC
AAGAAGGTTCTCTCGACGCAAGAGTGTTTCGGGTGCGGCCGCCTTGTCCG
TCAAGCAGCATCTGTAGGGGCAACAGCAACGGCGACGTGGCTGCCACTGC
GATGGACAGAGACATAGCAAAACAACACGGTGCGCCACTCTCATGTTATC
ATTGGGGCCGCAGTGACAAGGGCATGGTTGCCAGCAGTCTACCGAGTGCG
AATGGGTGTGGTTTTTTACTTAACGGTTTAGACCAAGCGGGTCTGCTGTC
CGCTGTCAATATCCTTGCAAGGGATGTGAGCTAGGGCCGCATAGTCCGGA
AGTTATGGCACGTACACGGACAACCTGAGAGGTAACACCCGTCGACACTG
ATATCGATATACTTGGCGTACTGTACCTCCAACCAGACATCGGGGGTATC
GGTTTAAACTCCTATTCATATGCATACACACTCAAATCGTGGTCAATGGG
TTTGTTGGTAAGGCTTTGCAGCGTTGTGTGTTTTCGGCCTCTCGCTGACG
TTAATCACCCTCCTCTTGGTCCCTGACACTAATCATGGTATCAGAAGCGG
GCCCTCCAAGAACAAGCAGCGAAGCCACCCAATCAAAACATAAAGCGCCC
GCTGCAGCGGCAGCCGCAGCAGCAGCAGCGACGACGGGACGAGCAGGGGA
AGCTGAAGCAGCCAGAGCAGCGGAAGCGACAGCGGTAGGAACTCCGATGG
CGGAGGGGGCAACGCGGTTCGAGCGTGGAGGGGCGGCACTGACGGAAAGT
CGCGGGGGAGGGAGAGGGATGCCGTCAGTAACTCTGAAGTTGGCGATGGA
CCGAAACGGGGCTGTTGACGACATGTCGGAGGGTCCCAAGAGGTTCACAT
CGCAGGCGTCTCTCGATGCGGGTGAGGAGACAAGCGTCCAACGGTAGCGG
GTAGTTGCTTCCTCTGTACTTATGCAGCAGTCTTTGTGCAGCCGTTCGAT
GTACTACTCCCAAGGTGCAGTCAATGCTGTCAGGTTGCAGGCGCCACAAG
GAATGGCGATGGGTTGGCACATGGGCTCGCACGAGTGGATAATGTACTTG
TGGTTGAGACGAGTTTCGGCCGTACCGTGCTGCAGTAGTCCCTCTCACCG
CTCAAGATCCCCGAGGAAAAGCGAGAATTCACAAGCTCTAATGGGCTTGA
TGGGCGCGCCAAAGCTCATGTAGTGACCTCCCCTTACCCACTTTTTGCAC
ATAATCGACGAGACGTGCTGTCCCCTCTCACTTCAACGACCTTTCAACAG
GCGAGACAAGGCAACGGAGGTTCCCAAGAGAGGGATTGACCAACATTGCC
AGACTCGTTACCTGTTCTCTCCGTGTGCCTTCTCGTGCCCCCTCCCCCCC
CCCCCTCCGTTACAGTACACCGCATCCGTCGAGACTGTGAGGCCGTTCTT
GTGGGCGTGGGCACCGTAGTACGGGACGACCCATCCCTCACGGTAGGCGA
GGGCTTAGAGGGGGGGTAGACGGAAGGGGGGGAGGAAAGAGGCCGGGGGT
AAGGGGGGTTGAAAAGGTCCATCCCCCATGGTGGCGGAAGGGTGAATTGG
GTGGGGGGGCGTACTCATGTTTTGCTGCTTTCGTTGTTTGACCATTGCGG
GTGGGGGTGAGGAATAGTGCAAAACAGGAAGAGGTGCGACAGCCAGGAAG
CAACAGTACGGAGGGGGGCGGGACGCAGAGTGGGAGAAGGCGGCGGGCAG
GCGGGACAAACTCACGGCCTGTTGTGTGGTTCGACGGCACATCTTGTCTT
GAGGCAAAGACCAGCAGCTTCTCGTTTACATGTGTGAGCAAGCTCAACAC
CCAATGGAGGGGTGCTCCCTTTGCGCCCGCGGGTGTTGGGACGATATTAT
GGCGCTTTCGGAAAGCCCTCTCGCGTCTAAGCTCTCCTTGTTACAAGCTC
ACACTAACACCCCTGCCCCGACTTGGTGTAGGTCCGCAGGGTGCCCCTCA
ATGAGGGGCAAACAAGGCAGCCAACGAGAGTTGTACTGGACCGTACTCTC
CGTCTGACTGGGGCTCAAGCTGGGCAGAACCCTCGCGCCATCTTGGGAGA
CGGGCACTCCTCGCTGGTTTTCTACTCTGCCGGCTGCGAGGAGTGAGTGA
CTTGCGCTGCACATGTAGGCAAAAAAATGACACCCCGTAGGAATACTCTG
AACACCGAGTTGAACTCTTCTGTGGAACTGCCTTTCGAAGGACTGTGTGG
CTGGCCTAGTTTTGAGCCTCATTCGCCTTCCTTTCAGAAATAGCTCTCTC
AATATTCTCGAACAAGTGATTACTCCAGTTGGAGACTTGTATTCCCCATT
AGCGTTGTCTTCGGCACGGTCCGATTGTGCCTACCCGTCCCAAGTTCTGC
CCCGCTCCGCGCCCGATGATACAACCCGCCGCCCCATTTCCACGTGCATC
GCAGCACCGAAGCGAGGGCTGCTGAGCTCAAAGCGGGCGTGAAGCGGTCA
CGGGCCACCGTCTCAGATTCCTCTGGGGAAACTGAACCTGGCACGTCTCA
TCAGAGGTTATCACCCGTCGACTTCGTTGGGCTGCCCGTACAGCGTCCGG
GGGCGGGTGTCGATCTCTCCGGCGTGTTGGAGGCGTTGTTCGAGGTGGGT
GTTGTTTTGAAAGTAGTTGAAGTCATGTAAAAGTGTTTTCTTTCTGTCAC
ATAGCGCAGTAGATCGGGGGTACACTGGAGGGGAGGAACAGCTCAACCTT
CCTGGTGCTACTGGTGACGATAGCACGGCAGCGGAATCCTTCAGCCGACC
GACGGCCGATCGAGGTCGTCAGTTTGGAGCGGGTGAAGGGTGGGTAGAAA
CTGCGAGCGACTGGTACGAAATGGGATTACTTTAATACAGGACAATAGAC
GTGCTGAGCAGCACGAAGGTCACACGTGCCCGAAAGCGTGCCGTAGCTGT
GGCAAAGGAGAGCAGGACAAGGTAGGGGGTGAATATATTGAAATACAGTG
CATTACTGCTGTAGGATGTGTGTAGTAGAATAGATGCAGCTGAATGATTG
CTGTTTGCAATGATACGTAGATGCGTTGTGATAAATGACATGCAATAGAA
CGTAACATGTAGCGAAGAGTTCTATAGCGAGGAGCTCATGAATGAATTGA
TGTTTGATTCGAGGATTGTTTTTGGAGCGAGATCACGAGGTGTTACGAGC
CCCACCAGACTCACTCCCAACTATCCCTCAATATCTCTCCTCTGTAAGTA
ACCTGACGAAGAAAGAAAGTACAAGCCCCAAGAGCGGCACTTAGCAACAA
CATCGACTTCGGTCACTGCCTCAACAGACTTCGGTCTACACAGACTTCGG
TCTGCACAGACTTCGGTCGGCACATCACACAGATTTGTTTTTCTGGAACT
GCACAAAGGCTTAACCGCCTGCAGACGACCCTTGGGTACATGGCACCTCA
ACACGACACATTTCTACGGAATGAACTCCACCGCAAAGTATGGATCTTGA
TGGCCGTTGTACCCACAAGCCATGGCTGGCCGATGGTCCTTGCCGACCTT
GTTGATGAGTAGTTTTCCCTCTTCCAGGGTGATAACGGTGCTGTACTAAT
ATTCGTAACGCCGCTGGCCTTTTAAGAGATCCGAGAGCACAGACAAGATG
AATATTCGACATAACCAATCAATCCCTGTATGCAAAACTGTGTGCAAAAG
GTATGCGTGCATTAAATCTTGTTGCACTCGTGCGACGACGGTTTTTTCAA
GGAGAAAGCGGTAAGCATCGTCTAGACGGACAGCCATCGGCTACTCCTTA
ATCTGATGGAGAGTACAGACGATATTATGATTTGCACACAACCACCATCT
GTTGCACGCTTATATTCTTGTTGCATCCTACAGCGTTCGATGTCGCCCAC
ATCATCTGCGAGTGCACCGATCATAAGGCGAATGATAATGTGTTCCGAAA
AGATTCATCAACGCGTACTTGTACATGCGTACTTGCACAACGAATCCACC
CTACTGCGGCGATGCCACGCTAAAGCAGTCGCGACGGGTGACAACGACGT
TGCATAAATACAGCGAAATCTTTGGGTCCTTGAGCATTTTCGTTGAACTC
GTGGGTTTTAAAGCTCCCACGCGCGTGAGCACCTACTTAAGGTGCTTATC
AAACAACATTCTCGACCATGATGGCCTGTTTTGAAGCCACACCGAAGGCT
GCAGAACACGCAGACTTTGGACTGCACCGTGACACCTTATGCTCATGGGT
GTTCTTGCAGCTCAGCAGAAGCTGGCGTGTGCTCACAATATTGTTATCCT
TGGCCCGTCTTTTGCGACAAACTTTCTTGCGTTTCTCTCAGCGAGGGATA
GACCACGTCCTGGTGGAAGGCGGGCCTAGCGTGGCCAGGGGTTTCCTTTC
AGAGAGGCTCGTTGACAGAGCAATCATCATTCGGGCTCCTATGGAGTTTT
CCCGGCCAGTCCCCTCAGATATAGAGACAGATACCCTGCGAAGGTAGGGC
ATGTCGGGAAGGTTGGTGTCAAAGACGGTACGACCGGACGGGTTTCCTCA
AGCCTCGAAAGGCCTTGTCGAGAGGGCCGGTTGTTTCTCCACGTGACCCC
TACCAACCACACATGATCGCAAGTATCTCTTCGAAATGCTCCATGTGTTG
ACTGTACTCCTCGTCATGTAGTTTTGTGTACATACTCCTGTGATACCCTT
TGTCTATCTCCTCAAACGTCAAAATTGGCCATCTTTGACAGCAGGGGTTA
GCGTTCTTGTTATGGGCACAGAAATGAGAACTGAAATTGCGTTGGATGCC
TGTCTGCGAGATTTATTAGTGCAAACTCGCACCGCTCCTAACTGTACTCA
AGGCGCAGTCACGCTACAGTAGGGAGGTGGAGCGCTATGACGGTGCTTGG
CAGTATCTACTGCTGATCCTCCTAGTCGGTGAACGGCGTTCTTTTTCGAC
CCCGACTTATACGAGGGGAAGGGTGCACGACATATGTGCATCGACTGTTC
ATGACGATGACGATTTTCGAGACTTTGCTCCGTGCTCCGACTTGGTTGAC
ATGCTCGATCACTTGTCTCTACTGACCACTCGCCGCGAGAAGGAGCCGCA
TACTGCACCGCGCAATAACCCCCCCACGACACAGAAAGTCCCCTTTATGT
CTTACCCATCGCCTCGTCACCTCCCGCTTTCAGGGCTGGGTTAGAGCTCC
TTGGTTGCACCAAGTGGGGAGACGACGAAGCGGAGTGTTGGACTCGACCG
GGGCTTGGCTGGCCCGGGGGGGGGGTTGGCATTTGGCCCTGATCTTCCTG
GTAGCCGAAGTTTGTTGTGAAGCCGTTGTCAGAATAGTGTTGTTGCTGGC
CTTGGTGTTCAGTGTTTTTCCGCTTGCCCGGATGCACGAACGGGCTCCGA
TTCGCGGAGGGGGGTCGGTTGAACTCTGCAAGGGGGGGATGAAGACGCTG
AAGCATCACCAGCAGGAAGGCTGCCGGCCTCGGAAGATAGAGTAGCACTT
ACAATACGTTAGGCTTCGACGTTGTGCTATGTAGTCACAGGTGATATCTT
GCCGATATCTTGTGTCTGAAGGTGTTTTTGTGCCCTTGTTTCGATGAGAC
CCGTTTTCGAGAAGGGAAAGGTTGAGGGATCTTAAACCGTCTACTCTATG
AGTGACCTGGACAGGCCCCCTCAGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig74:23980..29705-

>mRNA_Ecto-sp13_S_contig74.18579.1 ID=mRNA_Ecto-sp13_S_contig74.18579.1|Name=mRNA_Ecto-sp13_S_contig74.18579.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1284bp|location=Sequence derived from alignment at Ecto-sp13_S_contig74:23980..29705- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGCTTGACGTATGGACTGCAGCAGTTGCTTTTTATGTGCTTCCGCA
AGAGACGTTGTCGGAGTTCGCAGTTGCCGGTCTTTGTCAAGAAGGTTCTC
TCGACGCAAGAGTGTTTCGGGTGCGGCCGCCTTGTCCGTCAAGCAGCATC
TGTAGGGGCAACAGCAACGGCGACGTGGCTGCCACTGCGATGGACAGAGA
CATAGCAAAACAACACGAAGCGGGCCCTCCAAGAACAAGCAGCGAAGCCA
CCCAATCAAAACATAAAGCGCCCGCTGCAGCGGCAGCCGCAGCAGCAGCA
GCGACGACGGGACGAGCAGGGGAAGCTGAAGCAGCCAGAGCAGCGGAAGC
GACAGCGGTAGGAACTCCGATGGCGGAGGGGGCAACGCGGTTCGAGCGTG
GAGGGGCGGCACTGACGGAAAGTCGCGGGGGAGGGAGAGGGATGCCGTCA
GTAACTCTGAAGTTGGCGATGGACCGAAACGGGGCTGTTGACGACATGTC
GGAGGGTCCCAAGAGGTTCACATCGCAGGCGTCTCTCGATGCGGTACACC
GCATCCGTCGAGACTGTGAGGCCGTTCTTGTGGGCGTGGGCACCGTAGTA
CGGGACGACCCATCCCTCACGGTCCGCAGGGTGCCCCTCAATGAGGGGCA
AACAAGGCAGCCAACGAGAGTTGTACTGGACCGTACTCTCCGTCTGACTG
GGGCTCAAGCTGGGCAGAACCCTCGCGCCATCTTGGGAGACGGGCACTCC
TCGCTGGTTTTCTACTCTGCCGGCTGCGAGGACACCGAAGCGAGGGCTGC
TGAGCTCAAAGCGGGCGTGAAGCGGTCACGGGCCACCGTCTCAGATTCCT
CTGGGGAAACTGAACCTGGCACGTCTCATCAGAGGTTATCACCCGTCGAC
TTCGTTGGGCTGCCCGTACAGCGTCCGGGGGCGGGTGTCGATCTCTCCGG
CGTGTTGGAGGCGTTGTTCGAGGGCTGGGTTAGAGCTCCTTGGTTGCACC
AAGTGGGGAGACGACGAAGCGGAGTGTTGGACTCGACCGGGGCTTGGCTG
GCCCGGGGGGGGGGTTGGCATTTGGCCCTGATCTTCCTGGTAGCCGAAGT
TTGTTGTGAAGCCGTTGTCAGAATAGTGTTGTTGCTGGCCTTGGTGTTCA
GTGTTTTTCCGCTTGCCCGGATGCACGAACGGGCTCCGATTCGCGGAGGG
GGGTCGGTTGAACTCTGCAAGGGGGGGATGAAGACGCTGAAGCATCACCA
GCAGGAAGGCTGCCGGCCTCGGAAGATAGAGTAG
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