prot_Ecto-sp13_S_contig7397.18571.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7397.18571.1
Unique Nameprot_Ecto-sp13_S_contig7397.18571.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length589
Homology
BLAST of mRNA_Ecto-sp13_S_contig7397.18571.1 vs. uniprot
Match: A0A6H5L0D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D2_9PHAE)

HSP 1 Score: 874 bits (2259), Expect = 1.470e-299
Identity = 514/590 (87.12%), Postives = 532/590 (90.17%), Query Frame = 0
Query:    1 MIRGLPEQVDKARDALVALVLGREDGEVALGEEGAAALGTDSWRKIQDSSERVTITPDRSRCSLRVAGPPAAVEACRRELYTMLADAFRGEFVAVPIPREALCEVATPLRLADAAAXXXXXXXSSPKTGDGKQTAAAAGQIAEVLGPIGVASAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEITTALSKWSALTVTARVEEWMQPELFGKQRKAIKKLSQSMGGIVLNVVDGVCSGRAASEEEARDATRKLEERVNELRARRAVVRVPQEVVSQLTGRQGCSIDKLRERTLATICIDEGVGGKDVIIYGDPAAVAAAKLEVEAMARGPSKSGPAAQAPSDRQSQDGSVPDAAGDASPLLSPSPGEGVPQTGTPXXXXXXXXXXXXQHAGNAAGGRGQDVDLADRRECEVTTGSVKAVVAVPKQDGEGYRLGVEDQERVAEEEPPVVTPPGGSGDARQAPGPSASGSTGRPLGSRDASSXXXXXXXXXXXXXXXXXGSTGRGSFETKARDNPRGGGVPTGVAAEPAESPPPAVVSGSNH-PAKDSSASSYRGRLGERDRRVSAATESEAERLLASLLLVDNAAA 589
            MIRGLP QVDKARDALVALVLG EDGEVALGEEGAAALG DSWRKIQDSS RVTITPD+SRCSLRV+GPPAAVEACR+ELYTMLADA RG+FVAVPIPREAL EVAT LRLADAA XXXXXXXSSPKTGDGK+TAAAAGQIAEVLGP G+ASAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEI TALS WSALTVTA VEEWM+PEL GKQRKAIKKLSQSMGG+VLNVVDGVC GRAASEEEARDATRKLEERVNELRARRAVVRVP EVVSQLTGR+GCSIDKL+ERT ATICI+EGVGGK+ II GDPAAVAAAKLEVEAMARGPSKSGPA QAP++RQSQDGSVPDAAGD SPLLSPSPGEGVPQTGTP            QHAGN AGG GQDVDLADRREC+ T GSVK  VAVPK DGEGYR GVEDQERV EE+P VVTPPGG GDARQAPGPSASGSTGRPLG+RDAS XXXXXXXXXXXXXXXXX +   G FET ARDNPR GG P GVAAEPA SP PAVVS SNH PAK SSASSYRGRLGERDRRVSAATESEAERLLASLLLVDNAAA
Sbjct: 1061 MIRGLPGQVDKARDALVALVLGWEDGEVALGEEGAAALGADSWRKIQDSSGRVTITPDKSRCSLRVSGPPAAVEACRKELYTMLADASRGKFVAVPIPREALHEVATSLRLADAAXXXXXXXXSSPKTGDGKRTAAAAGQIAEVLGPTGIASAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEINTALSMWSALTVTAEVEEWMEPELLGKQRKAIKKLSQSMGGVVLNVVDGVCCGRAASEEEARDATRKLEERVNELRARRAVVRVPPEVVSQLTGRRGCSIDKLKERTRATICIEEGVGGKEFIICGDPAAVAAAKLEVEAMARGPSKSGPATQAPNNRQSQDGSVPDAAGDPSPLLSPSPGEGVPQTGTPSPLPPSRQNQNQQHAGNTAGGGGQDVDLADRRECDATAGSVKTAVAVPKLDGEGYRRGVEDQERVGEEQPLVVTPPGGGGDARQAPGPSASGSTGRPLGARDASXXXXXXXXXXXXXXXXXXXAGSEG-FETNARDNPRSGGDPAGVAAEPAGSPAPAVVSSSNHYPAKGSSASSYRGRLGERDRRVSAATESEAERLLASLLLVDNAAA 1649          
BLAST of mRNA_Ecto-sp13_S_contig7397.18571.1 vs. uniprot
Match: D7FTS7_ECTSI (KH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS7_ECTSI)

HSP 1 Score: 703 bits (1814), Expect = 1.200e-242
Identity = 428/589 (72.67%), Postives = 443/589 (75.21%), Query Frame = 0
Query:    1 MIRGLPEQVDKARDALVALVLGREDGEVALGEEGAAALGTDSWRKIQDSSERVTITPDRSRCSLRVAGPPAAVEACRRELYTMLADAFRGEFVAVPIPREALCEVATPLRLADAAAXXXXXXXSSPKTGDGKQTAAAAGQIAEVLGPIGVASAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEITTALSKWSALTVTARVEEWMQPELFGKQRKAIKKLSQSMGGIVLNVVDGVCSGRAASEEEARDATRKLEERVNELRARRAVVRVPQEVVSQLTGRQGCSIDKLRERTLATICIDEGVGGKDVIIYGDPAAVAAAKLEVEAMARGPSKSGPAAQAPSDRQSQDGSVPDAAGDASPLLSPSPGEGVPQTGTPXXXXXXXXXXXXQHAGNAAGGRGQDVDLADRRECEVTTGSVKAVVAVPKQDGEGYRLGVEDQERVAEEEPPVVTPPGGSGDARQAPGPSASGSTGRPLGSRDASSXXXXXXXXXXXXXXXXXGSTGRGSFETKARDNPRGGGVPTGVAAEPAESPPPAVVSGSNHPAKDSSASSYRGRLGERDRRVSAATESEAERLLASLLLVDNAAA 589
            MIRGLP  VDKARDALVALVLGREDGEVALGEE AAALG DSWRKIQDSSERVTITPDRSRCSLRV+GPPAAVEACRRELYTMLADAFRGEFVAVPIPREAL EVATPLRLADAAAXXXXXXXSSP+TGDGK+TAAAAGQIAEVLGP+GVA+AACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAV EI TALSKWSAL V A VEEWM+PELFGKQRKAIKKLSQSMGG+VLNVVDGVCSGRAASEEEARDATRKLEERV+ELRARRAVVRVP EVV++LTGR GCSIDK++ERT ATI I EGVGG +VII GDP+AVAAA+ EVEAMARGPSKS PAAQAP DRQS DG VPDAAGD SPLL PSPGEGVPQTGTP XXXXXXX     HAGNAAGG GQDVDLADRR  E T GSVK                                                                                                          AEPA SPPPAVV GSNHPAK SSASSYRGRLGERD RVSAATESEAERLLASLLLVDN AA
Sbjct:  370 MIRGLPGLVDKARDALVALVLGREDGEVALGEEAAAALGADSWRKIQDSSERVTITPDRSRCSLRVSGPPAAVEACRRELYTMLADAFRGEFVAVPIPREALHEVATPLRLADAAAXXXXXXXSSPRTGDGKRTAAAAGQIAEVLGPMGVAAAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVGEINTALSKWSALAVAAEVEEWMEPELFGKQRKAIKKLSQSMGGVVLNVVDGVCSGRAASEEEARDATRKLEERVSELRARRAVVRVPPEVVTRLTGRGGCSIDKIKERTRATIRIGEGVGGNEVIICGDPSAVAAARREVEAMARGPSKSSPAAQAPKDRQSPDGGVPDAAGDPSPLLPPSPGEGVPQTGTPSXXXXXXXNQNQLHAGNAAGGGGQDVDLADRRGGEATAGSVKT---------------------------------------------------------------------------------------------------------AEPAGSPPPAVVGGSNHPAKGSSASSYRGRLGERDTRVSAATESEAERLLASLLLVDNVAA 853          
BLAST of mRNA_Ecto-sp13_S_contig7397.18571.1 vs. uniprot
Match: D8LHP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP8_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 8.870e-16
Identity = 87/275 (31.64%), Postives = 127/275 (46.18%), Query Frame = 0
Query:    1 MIRGLPEQVDKARDALVALVLGREDGEVALGEEGAAALGTDSWRKIQD--SSERVTITPDRSRCSLRVAGPPAAVEACRRELYTMLADAFRGEFVAVPIPREALCEVATPLRLADAAAXXXXXXXSSPKTGDGKQTAAAAGQIAEVLGPIGVASAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEITTALSKWSALTVTARVEEWMQPELFGKQRKAIKKLSQSMG-GIVLNVVDGVCSGRAASEEEARDATR--KLEERVNELRARRA 270
            +I G    V +A+DA+ +LV G    EV +G           W   +        ++  D  R  + V G P  VE  R+E    LA  F G+F+AVP+PR AL ++A    L  AA        S     DG+              P G   A       G V+L ADWP SCVR+RGE A V  A   +  AL+ W+ L V+  V+  +   L  +  + +  +S +MG  +++    GV  GRA +E+EA++A R  KL+ +V  L  RR+
Sbjct:  306 LIWGPAGVVGEAKDAVCSLVSGSASAEVVVGVGRIGRRDRGFWVNCETMPGGGGASLEVDHKRGVVVVRGLPEEVEEGRKEFQDKLASLFPGDFLAVPMPRAALKDLADAQGLTRAA--------SQAGVVDGRDER-----------PDGCDEA-------GGVELWADWPFSCVRLRGEPATVRRAAKALYAALAVWNTLEVSVTVDRAIVTRLLSRSGRILAGISSNMGITLLVEREKGVLRGRARNEDEAKEANRVLKLKLKVAALAQRRS 554          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7397.18571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0D2_9PHAE1.470e-29987.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTS7_ECTSI1.200e-24272.67KH domain-containing protein n=1 Tax=Ectocarpus si... [more]
D8LHP8_ECTSI8.870e-1631.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 244..268
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 267..328
score: 11.51
IPR004087K Homology domainSMARTSM00322kh_6coord: 266..333
e-value: 5.2E-5
score: 32.6
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 240..339
e-value: 8.3E-9
score: 37.0
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 270..335
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 271..329
e-value: 1.1E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7397contigEcto-sp13_S_contig7397:3..3867 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7397.18571.1mRNA_Ecto-sp13_S_contig7397.18571.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7397 3..4364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7397.18571.1 ID=prot_Ecto-sp13_S_contig7397.18571.1|Name=mRNA_Ecto-sp13_S_contig7397.18571.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=589bp
MIRGLPEQVDKARDALVALVLGREDGEVALGEEGAAALGTDSWRKIQDSS
ERVTITPDRSRCSLRVAGPPAAVEACRRELYTMLADAFRGEFVAVPIPRE
ALCEVATPLRLADAAAAAAAATASSPKTGDGKQTAAAAGQIAEVLGPIGV
ASAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEITTALSKWSAL
TVTARVEEWMQPELFGKQRKAIKKLSQSMGGIVLNVVDGVCSGRAASEEE
ARDATRKLEERVNELRARRAVVRVPQEVVSQLTGRQGCSIDKLRERTLAT
ICIDEGVGGKDVIIYGDPAAVAAAKLEVEAMARGPSKSGPAAQAPSDRQS
QDGSVPDAAGDASPLLSPSPGEGVPQTGTPSPLPQSRQNQNQQHAGNAAG
GRGQDVDLADRRECEVTTGSVKAVVAVPKQDGEGYRLGVEDQERVAEEEP
PVVTPPGGSGDARQAPGPSASGSTGRPLGSRDASSSGGGINDSSSSSSSS
SSGSTGRGSFETKARDNPRGGGVPTGVAAEPAESPPPAVVSGSNHPAKDS
SASSYRGRLGERDRRVSAATESEAERLLASLLLVDNAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1