mRNA_Ecto-sp13_S_contig7389.18566.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7389.18566.1
Unique NamemRNA_Ecto-sp13_S_contig7389.18566.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 8.150e-135
Identity = 220/225 (97.78%), Postives = 220/225 (97.78%), Query Frame = 1 
Query:   37 QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSGWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 711
            QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQ L DPK   GWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL
Sbjct: 1674 QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQTLPDPK---GWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 1895
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: A0A6H5KAF7_9PHAE (FAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF7_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 2.050e-134
Identity = 218/225 (96.89%), Postives = 220/225 (97.78%), Query Frame = 1 
Query:   37 QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSGWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 711
            QLRVSAIRLMHIVM+TKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEP+KLQGL DPK   GWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLE VLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL
Sbjct:  754 QLRVSAIRLMHIVMMTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPEKLQGLPDPK---GWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLEAVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 975
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: K3WPN5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPN5_GLOUD)

HSP 1 Score: 197 bits (501), Expect = 3.330e-54
Identity = 108/226 (47.79%), Postives = 155/226 (68.58%), Query Frame = 1 
Query:   37 QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSG-WKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 711
            +LR+++++L     +  P+   E +  +++R R + +FF+ LT +  ++V  AQ AL  VI  N+Q KD   +PK+LLQ CLRPVL NL   +KL+LPLL+GLSRLL LLS+ FNVTLG+KL  +LRQW +P ++       +++G WK GEEP VAAAI+ LFHLLP S  FL+ L+   ++LE VL +Y +Y + S+P+ +PLTK+L+RYA  T+ YFL RE L
Sbjct: 1659 ELRIASVKLFRAAFLLAPD---EINQHQESRNRFVGVFFRYLTGQPPELVTCAQQALTDVIQLNKQNKDLL-LPKELLQQCLRPVLLNLADYRKLNLPLLEGLSRLLMLLSSCFNVTLGEKLLEHLRQWRDPDRI-------IKAGIWKRGEEPAVAAAIVDLFHLLPPSESFLESLITCVVELEAVLPKYGSYGKMSSPYRIPLTKFLNRYASSTVAYFLKREHL 1873
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: A0A078JX81_BRANA (BnaCnng66780D protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A078JX81_BRANA)

HSP 1 Score: 191 bits (486), Expect = 4.890e-54
Identity = 106/200 (53.00%), Postives = 136/200 (68.00%), Query Frame = 1 
Query:  106 TDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSGWKPGEEPDVAAAIMGLFHLLPHSP-KFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDR 702
            T    + R + IS+FFKSLT RA ++V  A+  L QVI   R       MPK+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSNWFNVTLG KL  +L++W EP+KL      + +  WK GEEP +AAAI+ LFHLLPH+  KFLD+LV LT+ LE  L     YS  ++P+ +PLTK+L+RYA   ++YFL R
Sbjct:   31 TQTHNELRAKIISMFFKSLTCRAPEIVAVAKEGLRQVINQQR-------MPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPEKLA-----QSQKSWKAGEEPKIAAAIIELFHLLPHAASKFLDELVTLTIDLEAALPPGQVYSEINSPYRLPLTKFLNRYASLAVDYFLSR 218
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: A0A397ESV8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ESV8_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.180e-53
Identity = 106/229 (46.29%), Postives = 160/229 (69.87%), Query Frame = 1 
Query:   37 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSG-WKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 711
            QLR++AI+L+         AF+  + L   +DAR R + +FFK LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GL+RLL LLSN FNVTLG+KL  +L+QW +P+++       +++G WK GEEP+VAAAI+ LFHLLP S  FLD L+   ++LE VL +Y ++ + S+P+ +PL ++L+RYA + + +FL R+ L
Sbjct:  123 QLRIAAIQLLR-------AAFVNDETLNQHQDARNRFVGIFFKFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLARLLALLSNCFNVTLGEKLLEHLKQWRDPERI-------IKAGIWKRGEEPNVAAAIVDLFHLLPPSDTFLDPLILCVVELEAVLPKYGSFGKRSSPYRLPLVRFLNRYAHQAVAFFLKRDHL 336
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: A0A418C387_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418C387_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.530e-53
Identity = 106/229 (46.29%), Postives = 160/229 (69.87%), Query Frame = 1 
Query:   37 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSG-WKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 711
            QLR++AI+L+         AF+  + L   +DAR R + +FFK LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GL+RLL LLSN FNVTLG+KL  +L+QW +P+++       +++G WK GEEP+VAAAI+ LFHLLP S  FLD L+   ++LE VL +Y ++ + S+P+ +PL ++L+RYA + + +FL R+ L
Sbjct: 1647 QLRIAAIQLLR-------AAFVNDETLNQHQDARNRFVGIFFKFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLARLLALLSNCFNVTLGEKLLEHLKQWRDPERI-------IKAGIWKRGEEPNVAAAIVDLFHLLPPSDTFLDPLILCVVELEAVLPKYGSFGKRSSPYRLPLVRFLNRYAHQAVAFFLKRDHL 1860
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: A0A397DAI0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DAI0_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.560e-53
Identity = 106/229 (46.29%), Postives = 160/229 (69.87%), Query Frame = 1 
Query:   37 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSG-WKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 711
            QLR++AI+L+         AF+  + L   +DAR R + +FFK LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GL+RLL LLSN FNVTLG+KL  +L+QW +P+++       +++G WK GEEP+VAAAI+ LFHLLP S  FLD L+   ++LE VL +Y ++ + S+P+ +PL ++L+RYA + + +FL R+ L
Sbjct: 1647 QLRIAAIQLLR-------AAFVNDETLNQHQDARNRFVGIFFKFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLARLLALLSNCFNVTLGEKLLEHLKQWRDPERI-------IKAGIWKRGEEPNVAAAIVDLFHLLPPSDTFLDPLILCVVELEAVLPKYGSFGKRSSPYRLPLVRFLNRYAHQAVAFFLKRDHL 1860
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: A0A3R7BKN8_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BKN8_9STRA)

HSP 1 Score: 195 bits (496), Expect = 1.560e-53
Identity = 106/229 (46.29%), Postives = 160/229 (69.87%), Query Frame = 1 
Query:   37 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSG-WKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 711
            QLR++AI+L+         AF+  + L   +DAR R + +FFK LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GL+RLL LLSN FNVTLG+KL  +L+QW +P+++       +++G WK GEEP+VAAAI+ LFHLLP S  FLD L+   ++LE VL +Y ++ + S+P+ +PL ++L+RYA + + +FL R+ L
Sbjct: 1654 QLRIAAIQLLR-------AAFVNDETLNQHQDARNRFVGIFFKFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLARLLALLSNCFNVTLGEKLLEHLKQWRDPERI-------IKAGIWKRGEEPNVAAAIVDLFHLLPPSDTFLDPLILCVVELEAVLPKYGSFGKRSSPYRLPLVRFLNRYAHQAVAFFLKRDHL 1867
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: A0A024UM79_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UM79_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.120e-53
Identity = 107/228 (46.93%), Postives = 157/228 (68.86%), Query Frame = 1 
Query:   37 QLRVSAIRLMHIVMVTKPEAFMETDVL---KDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSGWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 711
            QLR++AI+L+         AF+  D L   +D+R R + +FF+ LT +  ++VD AQ AL  V+  N++ +++S +PK+LLQ CLRPVL NL   +KL++PLL+GLSRLL LLSN FNVTLG+KL  +L+QW +P+++   A       WK GEEP+VAAAI+ LFHLLP S  FLD L+   ++LE VL +Y ++ + S+P+ +PL ++L+RYA + + +FL RE L
Sbjct: 1665 QLRIAAIQLLR-------AAFVNDDTLNQHQDSRNRFVGVFFRFLTGQPKELVDCAQKALTDVVIMNKRNQERS-LPKELLQQCLRPVLLNLADYRKLTIPLLEGLSRLLGLLSNCFNVTLGEKLLEHLKQWRDPERIIKAAI------WKRGEEPNVAAAIVDLFHLLPPSDTFLDPLILCVVELEAVLPKYGSFGKLSSPYRLPLVRFLNRYANQAVSFFLKREHL 1878
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BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Match: A0A5D6XXH6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH6_9STRA)

HSP 1 Score: 194 bits (494), Expect = 2.890e-53
Identity = 109/226 (48.23%), Postives = 150/226 (66.37%), Query Frame = 1 
Query:   37 QLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGLADPKVRSG-WKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHRYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL 711
            +LR++A++L     V  P+   E +  +DAR R + +FF+ LT    ++V  AQ AL  VI  N Q      +PK+LLQ CLRPVL NL   +KL+LPLL GLSRLL LLS+ FNVTLG+KL  +L+QW +P+++        ++G WK GEEP VAAAI+ LFHLLP S  FL+ L+   ++LE VL +Y +Y + S+P+  PLTK+L+RYA +T+ YFL RE L
Sbjct: 1653 ELRIAAVKLFRAAFVLAPD---EMNQHQDARNRFVGVFFRFLTGHPPELVACAQQALTDVIQLNTQSHKDLLLPKELLQQCLRPVLLNLADYRKLNLPLLDGLSRLLTLLSHCFNVTLGEKLLEHLKQWRDPERI-------TKAGIWKRGEEPAVAAAIVDLFHLLPPSESFLEALIACVVELEAVLPKYGSYGKMSSPYRRPLTKFLNRYAPQTIAYFLKREHL 1868
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7389.18566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFI6_ECTSI8.150e-13597.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAF7_9PHAE2.050e-13496.89FAT domain-containing protein n=1 Tax=Ectocarpus s... [more]
K3WPN5_GLOUD3.330e-5447.79Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A078JX81_BRANA4.890e-5453.00BnaCnng66780D protein n=1 Tax=Brassica napus TaxID... [more]
A0A397ESV8_9STRA1.180e-5346.29Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A418C387_9STRA1.530e-5346.29Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]
A0A397DAI0_9STRA1.560e-5346.29Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A3R7BKN8_9STRA1.560e-5346.29Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A024UM79_9STRA2.120e-5346.93Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
A0A5D6XXH6_9STRA2.890e-5348.23Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7389contigEcto-sp13_S_contig7389:2210..4230 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score431.4
Seed ortholog evalue2.7e-118
Seed eggNOG ortholog2880.D8LFI6
Model size711
KEGG koko:K08874
KEGG Pathwayko05166,map05166
Hectar predicted targeting categorysignal peptide
GOsGO:0000123,GO:0000166,GO:0003674,GO:0003712,GO:0003824,GO:0004402,GO:0004672,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006473,GO:0006475,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008144,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010556,GO:0016043,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016773,GO:0017076,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0030554,GO:0031248,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034212,GO:0034641,GO:0035267,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140096,GO:0140110,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1903506,GO:1990234,GO:2001141
Exons4
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0889@2759
Cds size711
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01001,ko03021,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464007.5160582-CDS-Ecto-sp13_S_contig7389:2209..23891681464007.5160582-CDS-Ecto-sp13_S_contig7389:2209..2389Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7389 2210..2389 +
1681464007.5505993-CDS-Ecto-sp13_S_contig7389:2904..31951681464007.5505993-CDS-Ecto-sp13_S_contig7389:2904..3195Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7389 2905..3195 +
1681464007.562143-CDS-Ecto-sp13_S_contig7389:3510..36411681464007.562143-CDS-Ecto-sp13_S_contig7389:3510..3641Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7389 3511..3641 +
1681464007.5728638-CDS-Ecto-sp13_S_contig7389:4121..42301681464007.5728638-CDS-Ecto-sp13_S_contig7389:4121..4230Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7389 4122..4230 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7389.18566.1prot_Ecto-sp13_S_contig7389.18566.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7389 2210..4230 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7389.18566.1

>prot_Ecto-sp13_S_contig7389.18566.1 ID=prot_Ecto-sp13_S_contig7389.18566.1|Name=mRNA_Ecto-sp13_S_contig7389.18566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp
LRFLFATITTALQLRVSAIRLMHIVMVTKPEAFMETDVLKDARTRCISLF
FKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKN
LTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQGL
ADPKVRSGWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLH
RYDNYSRPSNPFLVPLTKYLDRYAKETMEYFLDREKL
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mRNA from alignment at Ecto-sp13_S_contig7389:2210..4230+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7389.18566.1 ID=mRNA_Ecto-sp13_S_contig7389.18566.1|Name=mRNA_Ecto-sp13_S_contig7389.18566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2021bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7389:2210..4230+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCGTTTTCTTTTCGCCACCATCACGACCGCCCTCCAGCTGCGTGTGTC
TGCCATCCGGCTGATGCACATCGTGATGGTGACCAAGCCGGAGGCGTTCA
TGGAGACGGACGTGCTCAAGGATGCCCGTACGCGGTGCATCTCGCTGTTC
TTCAAGAGCCTTACCAGCAGGGCCGATCAGGTACTGCTGTATTTCATTTC
TTATGTTAGCCTTTTTTTACAGAGATTATGGGCGTATGTACCAAGTTGTT
ATTTGCCTTTCTTGAGGCATTTATATTCCTTGGTTTGGATTTTTCATGTT
CATACTTTTTTCTTGTTTCTGTGACGTACCTTTTGTGAACCAACGTCTCC
TCGTACCATCGCTTTGTATAGGCATTTTCTTTCTTCGTTGGTTCGACTCA
GTCACATTTTGTACCTTTTTTGGTTGCCTGCGGGTGCGGAAAATGTACCT
CTGTACGTACCGGGAACAAGGAGATTTTGGGTGACAATTGTCTCAACCTC
GGAACATTCCCGCTCACGTATTCGTGACCTCATTCCGTAGCCGAAAACGG
GTTTGGAACCTTCAACGGATAAATCCTCGATGGGATGTTGACGTACCACA
AGTCTTGCTCATCGGCGCGTGTCTTGGGTGGTCGATACTCTTCAAAATTG
AAAAGGAATACTGCTCCCATGTTGTATCTCTACGAAACCCGACAGGTGGT
AGACGCGGCCCAGGCGGCGCTCGTGCAAGTAATCTTCACGAACCGGCAGT
TCAAGGACAAGTCCGGCATGCCTAAAGACCTGCTGCAGTCGTGCCTCCGC
CCGGTGCTCAAGAACCTGACGCACATCCAGAAACTCAGCCTGCCACTGCT
GCAGGGGCTGAGCCGCCTGCTGTACCTGCTGTCGAACTGGTTCAACGTGA
CCCTGGGCGACAAGCTGTTCGGATACCTGCGGCAGTGGACCGAGCCGCAG
AAGCTGCAGGGCTTGGCTGACCCGAAGGTACGTAGTGTCGTCGGAAGTGA
TATTTTTTTTTTCTATGGTCGGAGTGTAATGTTTTTTTTTTTCTGTGGTC
GGAGTGTTTTGTTCTTTTTTGTTGAAGGTGGTGATGGTGTTTGGTGTTGT
GGTTGTCGTTGTTGTTGTTGCTGGTGGTGGGGTTTGTTGTTGTTTATAGT
TGTTGCTGTTGTTGCTGGTGTTAATGGTGGTGGTGGTTGTTGATTGTGTT
GGTGTTTGTTGTTGCTCTGTGCTCTGGCTCAATAACCTCCAATACTGTCC
GTTCTGAACCTCCCCCCCTGCTCCCTCGCTTGTTGGCCACTTTTCTTTCA
GGGATGGAAGCCCGGAGAGGAACCCGACGTGGCGGCCGCCATCATGGGCC
TCTTCCACCTCCTGCCGCACTCCCCGAAGTTCTTGGACCAGCTCGTCAAG
CTCACGCTGCAACTGGAAACGGTCCTGCACAGGTGCGGCAAGACGCGGAG
AGAGGGAGGCTCCCACGTGCAGTAGTCTTGAGCAATTTTCGCCTGTTTAC
GTGGTGCTACAGGGGGGCACCCGAGTGTTTTGGACGGGGGCACTCAGGTT
GAGTGCGCCAGAGGCTGTTATCCGCTGTGCTTCGTCGTTGTTGTTCTTTG
GCGACTGGCTGGTTTGGCAAGCCATCAGGGTCTTGGCTTGTCACGAAAGT
GTTGCGTGGTATGGTATTGTGAGACGACTTTTCTCTCCTCGAGCCCCTCC
CCCTCCCCCTTACCCTGTGCCGTGTCCTAGTATTGTAGAGACTCAGTTTT
CTCTCCTTCTCACCCTCCCTCCCTCCTCTCCCGCCCTCCCTTCTCTCCCT
CCCTCCCTTGTGTTCCTCCCTCCCTTGCTCTTCTCCATCTCCTTTTCCGT
TCCTCCGTCTCTCTCTCTGCCCCTCTCTTCGTCTTTTCTCTTTCTTTTTC
TCGTGTTTTCAGGTACGACAACTACAGCCGGCCTAGCAACCCCTTCCTGG
TCCCCCTGACCAAGTACCTCGACCGCTACGCGAAGGAAACCATGGAGTAC
TTCTTGGACAGGGAGAAGCTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7389:2210..4230+

>mRNA_Ecto-sp13_S_contig7389.18566.1 ID=mRNA_Ecto-sp13_S_contig7389.18566.1|Name=mRNA_Ecto-sp13_S_contig7389.18566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7389:2210..4230+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCGTTTTCTTTTCGCCACCATCACGACCGCCCTCCAGCTGCGTGTGTC
TGCCATCCGGCTGATGCACATCGTGATGGTGACCAAGCCGGAGGCGTTCA
TGGAGACGGACGTGCTCAAGGATGCCCGTACGCGGTGCATCTCGCTGTTC
TTCAAGAGCCTTACCAGCAGGGCCGATCAGGTGGTAGACGCGGCCCAGGC
GGCGCTCGTGCAAGTAATCTTCACGAACCGGCAGTTCAAGGACAAGTCCG
GCATGCCTAAAGACCTGCTGCAGTCGTGCCTCCGCCCGGTGCTCAAGAAC
CTGACGCACATCCAGAAACTCAGCCTGCCACTGCTGCAGGGGCTGAGCCG
CCTGCTGTACCTGCTGTCGAACTGGTTCAACGTGACCCTGGGCGACAAGC
TGTTCGGATACCTGCGGCAGTGGACCGAGCCGCAGAAGCTGCAGGGCTTG
GCTGACCCGAAGGTACGTAGTGGATGGAAGCCCGGAGAGGAACCCGACGT
GGCGGCCGCCATCATGGGCCTCTTCCACCTCCTGCCGCACTCCCCGAAGT
TCTTGGACCAGCTCGTCAAGCTCACGCTGCAACTGGAAACGGTCCTGCAC
AGGTACGACAACTACAGCCGGCCTAGCAACCCCTTCCTGGTCCCCCTGAC
CAAGTACCTCGACCGCTACGCGAAGGAAACCATGGAGTACTTCTTGGACA
GGGAGAAGCTG
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