prot_Ecto-sp13_S_contig7385.18562.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7385.18562.1
Unique Nameprot_Ecto-sp13_S_contig7385.18562.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length207
Homology
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 3.910e-136
Identity = 197/207 (95.17%), Postives = 200/207 (96.62%), Query Frame = 0
Query:    1 MYNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDMEHP 207
            MYNSLLESRPL TKAVTSGAIAFAGDVSCQLLALEVAKREEE+SSAQDVDE E HE FGDGGARSVASEIDWGRTLRFT VGAAVVAPALHAWYGFLI+RLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADY TT+VSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNK VLKDMEHP
Sbjct:    1 MYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDVDELEHHEPFGDGGARSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHP 207          
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 8.400e-136
Identity = 198/207 (95.65%), Postives = 199/207 (96.14%), Query Frame = 0
Query:    1 MYNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDMEHP 207
            MYNSLLESRPL TKAVTSGAIAFAGDVSCQLLALEVAKREEE SSAQ VD+HEQHE FGDGGA SVASEIDWGRTLRFT VGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAP FLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNK VLKDMEHP
Sbjct:   72 MYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEHSSAQHVDDHEQHEPFGDGGATSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHP 278          
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: A0A6A3NKH9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NKH9_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.340e-50
Identity = 93/196 (47.45%), Postives = 120/196 (61.22%), Query Frame = 0
Query:    2 YNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSN 197
            Y SLLE+ PL+TK  T GAIA  GD+ CQL+                ++E E+H+             +D  R   FT +G  +++P LH WYGFL  RLPG + A V KR+ALDQL FAP FL VFLS+V+ L+GN  +I  KLRAD+ T   +NWG W+PAQ++NFRFV    QVL++N VG  WN YLSY S+
Sbjct:   40 YTSLLETHPLSTKIATGGAIAGLGDMGCQLV----------------LEEKEKHKPL-----------LDVKRAAIFTFLGGFLISPVLHVWYGFLGSRLPGVSAAAVAKRLALDQLGFAPTFLPVFLSSVLTLEGNKEQIPDKLRADWWTVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSH 208          
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: W2Q4U2_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q4U2_PHYPN)

HSP 1 Score: 168 bits (425), Expect = 7.110e-49
Identity = 96/203 (47.29%), Postives = 123/203 (60.59%), Query Frame = 0
Query:    2 YNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDM 204
            Y SLLE+ PL+TK VT GAIA  GDV CQL                 V E E      DG A+     +D  R   FT +G  +++PALH WYGFL  RLPG + A V KR+ALDQL FAP FL + LS+V++L+G++  I  KLRAD+ +   +NW  W+PAQ++NFRFV    QVL+AN +G  WN YLSY S+  V K +
Sbjct:   45 YASLLETHPLSTKIVTGGAIAGLGDVGCQL-----------------VLESE------DGDAK-----LDLKRAAIFTFLGGFLISPALHVWYGFLGSRLPGVSTAAVAKRLALDQLGFAPTFLPIILSSVLMLEGHSEDIPDKLRADWWSVTKANWVVWVPAQILNFRFVPGSMQVLFANVIGLLWNAYLSYVSHSEVPKTL 219          
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: A0A835YKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC9_9STRA)

HSP 1 Score: 171 bits (433), Expect = 7.170e-49
Identity = 104/226 (46.02%), Postives = 131/226 (57.96%), Query Frame = 0
Query:    2 YNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASE-------------------IDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPG-TAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDMEHP 207
            Y++LL SRPL TK VT+  IA  GDV+CQL     A  EE Q    DV  H  H     GG  SV++                    +D  RT +F L+ AA+ AP+ H WY  L + + G TA    VKR+ALDQ LFAP F+ +F S +M+++G AAKI +KL+ DY  T+V NWG W+PAQ+INFR V   YQVL+AN VGFFWN  +S Q  K  L D E P
Sbjct:   28 YSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGE-NDVPPHHPHIH---GGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQP 249          
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT)

HSP 1 Score: 167 bits (424), Expect = 8.180e-49
Identity = 90/193 (46.63%), Postives = 118/193 (61.14%), Query Frame = 0
Query:    2 YNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSY 194
            YN LLE+ PL TK +T+GAIA   DV+CQ+            S   D D +           +S+   +DW RT  FT+V   +  P  H WYGFL  ++ GT     +KRV LDQ+LFAP  LA F S V+L++G + +I  KLR D PTT+++N+  WIPAQ+INF+FV   Y+VL+AN VGFFWNIYLSY
Sbjct:   35 YNKLLETHPLMTKCITAGAIAAVADVTCQV------------SFPSDEDAN-----------KSLLERMDWKRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFMAAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLSY 204          
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: D0MT87_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT87_PHYIT)

HSP 1 Score: 166 bits (419), Expect = 6.230e-48
Identity = 92/203 (45.32%), Postives = 122/203 (60.10%), Query Frame = 0
Query:    2 YNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDM 204
            Y SLLE+ PL TK VT GAIA  GDV CQL+                        L G+ G     +++D  RT+ FT +G  +++P LH WYGFL  RLPG + + V KR+ALDQL FAP FL + LS+V+ L+G+A  I  KLRAD+   + +NW  W+PAQ++NFRFV    QV+++N VG  WN YLSY S+  V K +
Sbjct:   45 YASLLETHPLKTKIVTGGAIAGLGDVGCQLV------------------------LEGEDGD----AKLDVKRTVIFTFLGGLLISPVLHVWYGFLGSRLPGVSTSAVAKRLALDQLGFAPTFLPIILSSVLTLEGHAEDIPDKLRADWWPLMKANWVVWVPAQILNFRFVPGSMQVIFSNVVGLLWNSYLSYVSHSQVPKAL 219          
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: A0A0P1ASJ6_PLAHL (Peroxisomal membrane mpv17 pmp22-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASJ6_PLAHL)

HSP 1 Score: 165 bits (418), Expect = 9.900e-48
Identity = 91/203 (44.83%), Postives = 119/203 (58.62%), Query Frame = 0
Query:    2 YNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDM 204
            Y SLLE+ P++TK VT G IA  GDV CQL                         L  D G     +++D  RT  FT +G  V++P LH WY FL  RLPG + A + KR+ALDQL FAP FL +FLS+V+ L+G+A  I  KLR+D+     +NW  W+PAQ+ NFRFV    QVL++N +G FWN YLSY S+  V+K +
Sbjct:   45 YASLLETHPISTKIVTGGTIAGLGDVGCQLF------------------------LESDDGH----AKLDIKRTAIFTFLGGVVISPILHVWYRFLGSRLPGVSTAAITKRLALDQLGFAPTFLPIFLSSVLTLEGHAEDIPDKLRSDWWPITKTNWVVWVPAQLFNFRFVPGSLQVLFSNVMGLFWNAYLSYMSHSKVVKKL 219          
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: A0A329SFZ2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFZ2_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.920e-47
Identity = 97/203 (47.78%), Postives = 118/203 (58.13%), Query Frame = 0
Query:    2 YNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDM 204
            Y SLLE+ PL TK VT GAIA  GDV CQL+ LEV                       D  AR      D  RT  FT +G  +++P LH WYGFL  RLPG +   V KR+ALDQL FAP FL V LS+V+ L+G+A  I  KLRAD+     +NW  W+PAQ++NFRFV    QVL++N VG  WN YLSY S+  V K +
Sbjct:   38 YASLLETHPLRTKIVTGGAIAGLGDVGCQLV-LEVE----------------------DDDAR-----FDVKRTAIFTFLGGFLISPVLHVWYGFLGSRLPGVSTTAVAKRLALDQLGFAPTFLPVILSSVLALEGHAEDIPNKLRADWWPLTKANWVVWVPAQILNFRFVPGSMQVLFSNVVGLLWNAYLSYVSHSEVPKAL 212          
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Match: A0A484DWD7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWD7_BRELC)

HSP 1 Score: 162 bits (411), Expect = 9.430e-47
Identity = 88/203 (43.35%), Postives = 120/203 (59.11%), Query Frame = 0
Query:    2 YNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVDEHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVVLKDM 204
            Y SLL + PL+TK VT G IA  GD+ CQ+L LE  +++                           ++ D  RT  FT +G   V+P LH WYGFL  RLPG + AT+ KR+ LDQ++FAP FL++FLS+V  L+G+A  I  KLRAD+     +NW  W+PAQ+INFRFV    QVL++N +G  WN YLS+ S+  + K +
Sbjct:   45 YASLLVTHPLSTKIVTGGTIAGLGDIGCQVL-LEGERKD---------------------------AKFDLKRTAIFTFLGGVAVSPILHVWYGFLGSRLPGISKATITKRLVLDQIIFAPVFLSIFLSSVQALEGHADDIQDKLRADWWPLTKANWVIWVPAQIINFRFVPATMQVLFSNVMGLVWNSYLSFVSHSEIPKTL 219          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7385.18562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTH2_ECTSI3.910e-13695.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL95_9PHAE8.400e-13695.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3NKH9_9STRA1.340e-5047.45Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
W2Q4U2_PHYPN7.110e-4947.29Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A835YKC9_9STRA7.170e-4946.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4Q2YFM0_9BACT8.180e-4946.63Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobia... [more]
D0MT87_PHYIT6.230e-4845.32Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A0P1ASJ6_PLAHL9.900e-4844.83Peroxisomal membrane mpv17 pmp22-like protein n=1 ... [more]
A0A329SFZ2_9STRA1.920e-4747.78Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A484DWD7_BRELC9.430e-4743.35Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 137..193
e-value: 1.7E-21
score: 76.2
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 2..198
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 2..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 138..207
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 166..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7385contigEcto-sp13_S_contig7385:5287..7541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7385.18562.1mRNA_Ecto-sp13_S_contig7385.18562.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7385 5287..7541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7385.18562.1 ID=prot_Ecto-sp13_S_contig7385.18562.1|Name=mRNA_Ecto-sp13_S_contig7385.18562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp
MYNSLLESRPLTTKAVTSGAIAFAGDVSCQLLALEVAKREEEQSSAQDVD
EHEQHELFGDGGARSVASEIDWGRTLRFTLVGAAVVAPALHAWYGFLIRR
LPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADY
PTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKVV
LKDMEHP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22