prot_Ecto-sp13_S_contig73807.18558.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig73807.18558.1
Unique Nameprot_Ecto-sp13_S_contig73807.18558.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: D7FNE8_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE8_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 8.270e-25
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query:    1 MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 51
            MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ
Sbjct: 1074 MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 1124          
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A6H5KXR6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR6_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 8.280e-25
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query:    1 MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 51
            MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ
Sbjct:  961 MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 1011          
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A835YX58_9STRA (Calcium-independent phospholipase-like protein A2-gamma, C terminal part n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX58_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.470e-14
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALKQ 51
            ++VGTSTG I+A LAG++ FP+A+CE MYD+LI  IF K P GG+KLALKQ
Sbjct:   53 IVVGTSTGAIVAALAGLECFPLAQCEAMYDALIKDIFQKSPSGGVKLALKQ 103          
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A7R9UET1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET1_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 7.020e-7
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKL 47
            +I GTSTGGIIA L GV+   + + ER+YD L+ KIF + PG G KL
Sbjct:  174 VICGTSTGGIIAVLLGVRRMSIDDIERLYDILLGKIFQRLPGAGAKL 220          
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Match: A0A2V1DZV4_9PLEO (Uncharacterized protein n=1 Tax=Periconia macrospinosa TaxID=97972 RepID=A0A2V1DZV4_9PLEO)

HSP 1 Score: 47.8 bits (112), Expect = 7.060e-5
Identity = 22/48 (45.83%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLA 48
            ++VGTSTGGIIA   G+K + V  C + + SL+ K F K   GG +L+
Sbjct:  749 LVVGTSTGGIIALALGIKNWSVEHCSKSFTSLVTKAFTKRYPGGFRLS 796          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73807.18558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FNE8_ECTSI8.270e-25100.00Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KXR6_9PHAE8.280e-25100.00PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YX58_9STRA7.470e-1464.71Calcium-independent phospholipase-like protein A2-... [more]
A0A7R9UET1_9STRA7.020e-755.32Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A2V1DZV4_9PLEO7.060e-545.83Uncharacterized protein n=1 Tax=Periconia macrospi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1090.10coord: 1..51
e-value: 1.6E-5
score: 26.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
IPR016035Acyl transferase/acyl hydrolase/lysophospholipaseSUPERFAMILY52151FabD/lysophospholipase-likecoord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig73807contigEcto-sp13_S_contig73807:138..290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig73807.18558.1mRNA_Ecto-sp13_S_contig73807.18558.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig73807 138..317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig73807.18558.1 ID=prot_Ecto-sp13_S_contig73807.18558.1|Name=mRNA_Ecto-sp13_S_contig73807.18558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
MIVGTSTGGIIAGLAGVKAFPVAECERMYDSLINKIFIKHPGGGMKLALK
Q
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016035Acyl_Trfase/lysoPLipase