mRNA_Ecto-sp13_S_contig7379.18551.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7379.18551.1
Unique NamemRNA_Ecto-sp13_S_contig7379.18551.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 600 bits (1546), Expect = 1.880e-193
Identity = 295/302 (97.68%), Postives = 301/302 (99.67%), Query Frame = 1
Query:    1 QIPLAEEHDCSVTASYKGDSKTGSTPYAWAYGYEWTIHILSYVGTLGPISSPMHSLYPADSAVLYISGSDCESCLYIPNDGSSLTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISSGDIRGFLVQWDTEEGFEQAIGGGNTGAGCSEIGFGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFSSTG 906
            QIPLAEEHDCSVTASYKGD+KTGSTPYAW+YGYEWTIHILSYVGTLGPISSPMHSLYPADSAVLYISGSDCESCLYIPNDGSSLTMGTPYYVR+AAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRL+VFFCDPLISSGDIRGFLVQWDT+EGFEQAI GG+TGAGCSEIGFGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFSSTG
Sbjct: 16084 QIPLAEEHDCSVTASYKGDTKTGSTPYAWSYGYEWTIHILSYVGTLGPISSPMHSLYPADSAVLYISGSDCESCLYIPNDGSSLTMGTPYYVRVAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLEVFFCDPLISSGDIRGFLVQWDTDEGFEQAIEGGDTGAGCSEIGFGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFSSTG 16385          
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: A0A6H5JYH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH1_9PHAE)

HSP 1 Score: 514 bits (1324), Expect = 1.250e-163
Identity = 261/302 (86.42%), Postives = 269/302 (89.07%), Query Frame = 1
Query:    1 QIPLAEEHDCSVTASYKGDSKTGSTPYAWAYGYEWTIHILSYVGTLGPISSPMHSLYPADSAVLYISGSDCESCLYIPNDGSSLTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISSGDIRGFLVQWDTEEGFEQAIGGGNTGAGCSEIGFGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFSSTG 906
            QIPLAEEHDCSVTASYKGD+KTGSTPYAWAYGYEWTIHILSYVGTL PISSPMHSLYPADSAVL+ISGSDCESCLYIPNDGSSLTMGTPYYVR+ AYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRL+VFFCDPLISSGDIRGFLVQWDT+EGFEQAIGGGNTG                   G    S     + G  TYYIRVAALGDVAAQPVNPTGDPPDNTNWSG+IEAVPVDQPPSSPGPVSIYVL+GSTLQVHMEVPAESGGSDITQYIIDVDSVSTFSSTG
Sbjct: 8703 QIPLAEEHDCSVTASYKGDTKTGSTPYAWAYGYEWTIHILSYVGTLEPISSPMHSLYPADSAVLHISGSDCESCLYIPNDGSSLTMGTPYYVRVVAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLEVFFCDPLISSGDIRGFLVQWDTDEGFEQAIGGGNTG-------------------GLPVSSTRHHRVVGDRTYYIRVAALGDVAAQPVNPTGDPPDNTNWSGIIEAVPVDQPPSSPGPVSIYVLNGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFSSTG 8985          
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: A0A7S3XK73_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK73_HETAK)

HSP 1 Score: 270 bits (691), Expect = 1.080e-78
Identity = 136/293 (46.42%), Postives = 183/293 (62.46%), Query Frame = 1
Query:    4 IPLAEEHDCSVTASYKGDSKTGSTPYAWAYGYEWTIHILSYVGTLGPISSPMHSLYPADSAVLYISGSDCESCLYIPNDG--SSLTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISSGDIRGFLVQWDTEEGFEQAIGGGNTGAGCSEIGFGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESGGSDITQYIIDV 876
            +PLA E DCSV  +Y+G S    + Y W +GY WT+  L      G + SP H+LYP+ SA +Y  G  CE C Y+P++   S LT+G+ Y+VRI AYNA      G+ S+D+  VV VVPNQ+PF P DVSV  VSG+ L V FC+P +S+ DI  F VQWDT   F  A    ++ A CS   +G+C+VS A++ G CPY   +  L  G TYY+RVAA  DV  Q VNPTG PPDNT WS  I A P DQ P  P  + +YV++G+ +Q+ +E+P   GG +IT+Y+ ++
Sbjct:  628 VPLALEDDCSVAQTYQGSSSEDLSVYRWGFGYAWTVTFLK-ASVAGSLGSPHHNLYPS-SASIYAVGDSCEECYYLPSESAWSGLTLGSEYFVRIFAYNAF-----GTHSEDNVEVVSVVPNQVPFPPEDVSVQAVSGTTLQVSFCNPSVSADDIDRFEVQWDTSSNFSSAE---SSSASCSSGEYGACIVSGASLEGDCPYQYDIEDLVDGTTYYVRVAARNDVPVQAVNPTGTPPDNTQWSSTISAEPADQVPDEPESLWLYVVNGTVVQLQLEIPEHDGGQNITEYLFEI 910          
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: A0A836CHM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHM4_9STRA)

HSP 1 Score: 224 bits (572), Expect = 9.630e-63
Identity = 128/305 (41.97%), Postives = 181/305 (59.34%), Query Frame = 1
Query:    4 IPLAEEHDCSVTASYKGD--SKTGSTPYAWAYGYEWTIHILSYVGTLGPIS--SPMHSLYPADSAVLYISGSDCESCLYI--PNDGSSLTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISSGDIRGFLVQWDTEEGFEQAIGGGNTGAGCSE-IGFGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFS 897
            + L+   DC+V   Y GD    T      WA GYEW++  L+      P++  SP H  +   +A + ISG DC  C Y+  P D   LT+G  YY+ + A+NA+G S+          VV +VPNQ+P  P+ +   V+SG+++ V F  P  S+GDI G+ VQWDT   F  A+  G+     +     GSCV +   + G  P++ ++ GLS  + YY RV+ALG VAAQ V+P  DPPDNTNWS  + A P ++PP+SPG V +YVLDG+TLQVH+EVP E+GG+ IT ++ + D+ STFS
Sbjct: 1107 VLLSSIADCAVGVVYGGDIAQPTAYAAQTWARGYEWSVTFLAIDSGAAPLALTSPPHK-FAGSAAAVSISGLDCVGCYYVGAPPD-LPLTLGRTYYLHVMAHNAIGYSDAAGAP-----VVSIVPNQVPMKPS-IDAEVMSGTKVAVHFSPPAQSAGDIWGYRVQWDTAVTFANAVAPGDDDCTMAPGTDAGSCVATAGLIVGDKPFTQVVKGLSHKQ-YYFRVSALGAVAAQAVDPDHDPPDNTNWSDTVSATPTNKPPTSPGDVVVYVLDGATLQVHVEVPTETGGATITNFVFETDTSSTFS 1402          
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: A0A7S4I964_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I964_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.480e-44
Identity = 111/274 (40.51%), Postives = 145/274 (52.92%), Query Frame = 1
Query:   82 AWAYGYEWTIHILSYVGTLGPISSPMHSLYPADSAVLYISGSDCESCLYIPNDGSSLTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISS--GDIRGFLVQWDTEEGFEQAIGGGNTGAGCSEIGFGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFS 897
            AW+ GYEW I      G + P++SP H L PADS V  I  +DC  CLYI  DG  L+M   +YVR +A NALG S         S  V  VP  IP APTD SV V++G  ++V F  P +S    DI  ++++W     FE       T A CS   +G C  +D  V    P+ + +  L  GETY++RVAA   V  Q V+P+G PPDNTNWS V+  VP DQ P  P  V    +  ++LQ+  E P   GG  I+ Y+   D+   FS
Sbjct: 2843 AWSGGYEWAITFHKVNGEVQPLTSPKHHLLPADSTV-DIGVADCVKCLYI--DG--LSMWKQHYVRASAKNALGWSTF-------SEAVQAVPKAIPGAPTDASVLVIAGDCVEVSFSPPAMSDDPADITSYVLEWSHIANFESLP----TDASCSSHRYGRCSFTDTTV--PTPFKVEVCNLIAGETYFVRVAARNSVEVQEVDPSGSPPDNTNWSSVLSTVPEDQVPDPPVHVLAQGMARNSLQIIFERPDRDGGQPISSYVFSWDTNLDFS 3098          
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: A0A7R9WKX3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKX3_9STRA)

HSP 1 Score: 167 bits (422), Expect = 9.820e-43
Identity = 106/274 (38.69%), Postives = 144/274 (52.55%), Query Frame = 1
Query:   85 WAYGYEWTIHILSYVGTLGPISSPMHSLYPADSAVLYISGSDCESCLYIPNDGSSLTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISSGD--IRGFLVQWDTEEGFEQAIGGGNTGAGCSEIGFGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFSS 900
            W+ G+EW I      G +  ++SP H L PAD+ V  I  +DC  CLY+    S L+M   +YVR+ A NA G S   S        V  +P  IP +P+D SV V+SG+ L+V F  P        I  ++++W+    F+       + A CS   +G C  +D  V    P+ + +  L  GETY++RVAA   V AQ V+P+G PPDNTNWS V+ AVP DQ P  P  V    +  + LQV  E PA  GG  IT+YI   D+   FSS
Sbjct:  188 WSGGFEWAITFHKVNGAMHQLTSPKHHLLPADTTV-DIGVADCVKCLYV----SGLSMWKQHYVRVRAQNAHGWSTFSS-------TVQAIPKAIPSSPSDTSVLVISGNCLEVSFSPPAXXXXXXXITSYVLEWNFGATFDNLP----SDASCSSHRYGRCSFTDTTV--PIPFRVEVCNLVAGETYFVRVAARNSVEAQKVDPSGSPPDNTNWSSVLSAVPEDQVPDPPVHVLTSGMARNALQVIFEPPARDGGQTITEYIFSWDTNDDFSS 443          
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: A0A2D4CCD6_PYTIN (Similar to titin isoform N2B putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCD6_PYTIN)

HSP 1 Score: 161 bits (408), Expect = 7.930e-41
Identity = 110/358 (30.73%), Postives = 161/358 (44.97%), Query Frame = 1
Query:   46 YKGDSKTGSTPYAWAYGYEWTIHILSYVGTLGPISSPMHSLYPADSAVLYISGSDCESCLYIPNDGSS-LTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISS--------GDIRGFLVQWDTEEGFEQAIG--------------------------------------------------GGNTGAGCSEIG----------FGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESG----GSDITQYIIDVDSVSTFSS 900
            Y GD+ T  T Y    GY W IH+LS    L  + + +  L P+DS V  I G +C  C Y+P   +  LTMG  Y++ +AAYN  G  ++G+        +   P+Q+P AP++V ++VVSG++L+VFF  P ++S         DI  ++VQWD    F+  +                                                       G  C+             F   V+S   + G  P+  L+TGL+ G TYY+RVAA+  V  Q +   G+PPDN  WS    A   D+ P  P  V +Y   G++L+V ++ P+  G    G  IT + IDVD+VSTF S
Sbjct: 2667 YLGDTATRMTVYESTRGYVWRIHLLSVGMPLAYLRTKLPRLLPSDSTVT-IRGMECRKCYYLPTQTTKKLTMGQEYFLEVAAYNENGKGQVGTP-------IKATPSQVPNAPSNVDLSVVSGTQLEVFFAPPALASTNVSPNFNNDISSYIVQWDVRNDFKHGLAICTACATALKINSLTVTESLAAKVVVGTRFTIADDACILEVAVIVSATRIDVTNGHNCNNFAAQTYALYYYTFPPAVLSGLTIQGSPPFRYLITGLTLGTTYYVRVAAVNSVPVQQIALDGNPPDNRKWSTTYSAKTADKVPDPPVSVYLYPFSGTSLEVQIQPPSRDGKGQNGLAITHFWIDVDTVSTFDS 3016          
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: A0A2D4BES8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BES8_PYTIN)

HSP 1 Score: 137 bits (345), Expect = 1.770e-32
Identity = 97/328 (29.57%), Postives = 145/328 (44.21%), Query Frame = 1
Query:  136 LGPISSPMHSLYPADSAVLYISGSDCESCLYIPNDGSS-LTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISS--------GDIRGFLVQWDTEEGFEQAIG--------------------------------------------------GGNTGAGCSEIG----------FGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESG----GSDITQYIIDVDSVSTFSS 900
            L  + + +  L P+DS V  I G +C  C Y+P   +  LTMG  Y++ +AAYN  G  ++G+        +   P+Q+P AP++V ++VVSG++L+VFF  P ++S         DI   +VQWD    F+  +                                                       G  C+             F   V+S   + G  P+  L+TGL+ G TYY+RVAA+  V  Q +   G+PPDN  WS    A   D+ P  P  V +Y   G++L+V ++ P+  G    G  IT + IDVD+VSTF S
Sbjct:  937 LAYLRTKLPRLLPSDSTVT-IRGMECRKCYYLPTQTTKKLTMGQEYFLEVAAYNENGKGQVGTP-------IKATPSQVPNAPSNVDLSVVSGTQLEVFFAPPALASTNVSPNFNNDISSXIVQWDVRNDFKHGLAICTACATALKINSLTVTESLAAKVVVGTRFTIADDACILEVAVIVSATRIDVTXGHNCNNFAAQTYALYYYTFPPAVLSGLTIQGSPPFRYLITGLTLGTTYYVRVAAVNSVPVQQIALDGNPPDNRKWSTTYSAKTADKVPDPPVSVYLYPFSGTSLEVQIQPPSRDGKGQNGLAITHFWIDVDTVSTFDS 1256          
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: A0A2D4CCQ8_PYTIN (Similar to titin isoform N2B putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCQ8_PYTIN)

HSP 1 Score: 136 bits (342), Expect = 4.600e-32
Identity = 100/334 (29.94%), Postives = 150/334 (44.91%), Query Frame = 1
Query:  127 VGTLGPISSPMHSLYPA---DSAVLYISGSDCESCLYIPNDGSS-LTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISS--------GDIRGFLVQWDTEEGFEQAIG--------------------------------------------------GGNTGAGCSEIG----------FGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSSPGPVSIYVLDGSTLQVHMEVPAESG----GSDITQYIIDVDSVSTFSS 900
            +G LG  ++ M ++Y +   DS V  I G +C  C Y+P   +  LTMG  Y++ +AAYN  G  +IG+        +   P+Q+P AP++V ++VVSG++L+VFF  P ++S         DI  ++VQWD    F+  +                                                       G  C+             F   V+S   + G  P+  L+TGL+ G TYY+RVAA+  V  Q +   G+PPDN  WS    A   D+ P  P  V +Y   G++L+V ++ P+  G    G  IT + IDVD+VSTF S
Sbjct: 2229 IGYLGDTATRM-TVYESTRGDSTVT-IRGMECRKCYYLPTQTTKKLTMGQEYFLEVAAYNENGKGQIGTP-------IKATPSQVPNAPSNVDLSVVSGTQLEVFFAPPALASTNVSPNFNNDISSYIVQWDVRNDFKHGLAICTACATALKINSLTVTESLAAKVVVGTRFTIADDACILEVAVIVSATRIDVTNGHNCNNFAAQTYALYYYTFPPAVLSGLTIQGSPPFRYLITGLTLGTTYYVRVAAVNSVPVQQIALDGNPPDNRKWSTTYSAKTADKVPDPPVSVYLYPFSGTSLEVQIQPPSRDGKGQNGLAITHFWIDVDTVSTFDS 2553          
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Match: A0A5A8E3K0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3K0_CAFRO)

HSP 1 Score: 130 bits (328), Expect = 3.460e-30
Identity = 100/315 (31.75%), Postives = 149/315 (47.30%), Query Frame = 1
Query:    4 IPLAEEHDCSVTASYKGDSKTGSTPYAWAYGYEWTIHILSYVGTLGPISSPMH----SLYPADSAVLYISGSDCESCLYIPNDGSSLTMGTPYYVRIAAYNALGASEIGSGSDDSSLVVG--VVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLISSG-DIRGFLVQWDTEEGFEQAIGGGNTGAGCSEIGFGSCVVSDAAVAGQCPYSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPVDQPPSS------PGP---VSIYVLDGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFSS 900
            +P        VT     D+         A    W + + S  G  G  + P+      L PA +A + ++G+ C+ C  +    + LT G  YYVR+ A +  G   +        LV+    VP++IP AP + S+ VVS SRL++ +  P  + G  I  + V+WDT   F      G     C     GS  V   A+AG  PYSL++ GLS G+TY++R+ A   +  Q V+ TG PPDN        A  +  PPS+      PGP   V + VL G +L+V  + P   GG++I+ Y ++ D  STF+S
Sbjct: 16161 LPGVAAAHVEVTEGVAEDTNGDGVVTGPAPARSWLVRVDSRAGDPGAAALPLEVSRLGLLPA-AAAISVTGAGCDRCARL----AGLTQGQAYYVRVRASSDAGVGPV--------LVMAGTAVPSRIPGAPREASLGVVSDSRLELLWRAPASTGGRPISRYCVEWDTTSSFSSLASSGAPSR-CGGYALGSAFVQGEAIAGPGPYSLVMGGLSAGQTYFVRINADNGLPFQAVSHTGTPPDN-------RAFELPTPPSATPAKVAPGPSANVEVVVLWGDSLRVVFDAPIRDGGNNISSYRVEWDVASTFAS 16454          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7379.18551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNA6_ECTSI1.880e-19397.68Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
A0A6H5JYH1_9PHAE1.250e-16386.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XK73_HETAK1.080e-7846.42Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836CHM4_9STRA9.630e-6341.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4I964_9STRA1.480e-4440.51Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9WKX3_9STRA9.820e-4338.69Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A2D4CCD6_PYTIN7.930e-4130.73Similar to titin isoform N2B putative (Fragment) n... [more]
A0A2D4BES8_PYTIN1.770e-3229.57Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A2D4CCQ8_PYTIN4.600e-3229.94Similar to titin isoform N2B putative (Fragment) n... [more]
A0A5A8E3K0_CAFRO3.460e-3031.75Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7379contigEcto-sp13_S_contig7379:1796..4517 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score602.1
Seed ortholog evalue1.5e-169
Seed eggNOG ortholog2880.D7FNA6
Model size907
KEGG koko:K12567
KEGG Pathwayko05410,ko05414,map05410,map05414
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.cytoskeletal protein binding
EggNOG OGsKOG0613@1,KOG0613@2759
EC2.7.11.1
Cds size906
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464006.306651-CDS-Ecto-sp13_S_contig7379:1795..19171681464006.306651-CDS-Ecto-sp13_S_contig7379:1795..1917Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7379 1796..1917 +
1681464006.3184302-CDS-Ecto-sp13_S_contig7379:2523..27671681464006.3184302-CDS-Ecto-sp13_S_contig7379:2523..2767Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7379 2524..2767 +
1681464006.3282485-CDS-Ecto-sp13_S_contig7379:3122..32851681464006.3282485-CDS-Ecto-sp13_S_contig7379:3122..3285Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7379 3123..3285 +
1681464006.3412552-CDS-Ecto-sp13_S_contig7379:3790..38971681464006.3412552-CDS-Ecto-sp13_S_contig7379:3790..3897Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7379 3791..3897 +
1681464006.3507288-CDS-Ecto-sp13_S_contig7379:4246..45161681464006.3507288-CDS-Ecto-sp13_S_contig7379:4246..4516Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7379 4247..4516 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7379.18551.1prot_Ecto-sp13_S_contig7379.18551.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7379 1796..4516 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7379.18551.1

>prot_Ecto-sp13_S_contig7379.18551.1 ID=prot_Ecto-sp13_S_contig7379.18551.1|Name=mRNA_Ecto-sp13_S_contig7379.18551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
QIPLAEEHDCSVTASYKGDSKTGSTPYAWAYGYEWTIHILSYVGTLGPIS
SPMHSLYPADSAVLYISGSDCESCLYIPNDGSSLTMGTPYYVRIAAYNAL
GASEIGSGSDDSSLVVGVVPNQIPFAPTDVSVTVVSGSRLDVFFCDPLIS
SGDIRGFLVQWDTEEGFEQAIGGGNTGAGCSEIGFGSCVVSDAAVAGQCP
YSLLLTGLSGGETYYIRVAALGDVAAQPVNPTGDPPDNTNWSGVIEAVPV
DQPPSSPGPVSIYVLDGSTLQVHMEVPAESGGSDITQYIIDVDSVSTFSS
TG
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mRNA from alignment at Ecto-sp13_S_contig7379:1796..4517+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7379.18551.1 ID=mRNA_Ecto-sp13_S_contig7379.18551.1|Name=mRNA_Ecto-sp13_S_contig7379.18551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2722bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7379:1796..4517+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATTCCATTGGCTGAGGAACACGACTGTTCAGTGACTGCATCCTACAA AGGGGACTCCAAGACGGGATCCACGCCGTACGCCTGGGCCTACGGATACG AATGGACCATTCATATCCTCAGGTACGCTATTCTTGCAATCGACAGCCAA CCTGCTCCGCTACCCTCTGATATATTTCGTTTGTATCTGTCGGTTGTATT ATCCATACAGTAGAATATTTAGTCATCCACAACCGTAAATATCCATTCAA AAGCAACGACCTTCGTAGAAACCGCACTCGACATCTCTGACGCGGAATCC GACCGAATTTTGAACGGACTCCGGGCATTGCCCACCAGTTTTGGATAATA CTTCGTTTTGGGCGTCGATACTTTCTGAGATCAGACGTACGGTAACGGTG CAGTCGAGAGAACCGTTACTATATTCCCGATCCTTTCGGGAGCCATCTTT CGAAACTATTCAATCACCATGTCACTGCTGTGAATCGTTCCCACTCAGCG AACAGTCTTCCGTCCATGGTGTCGTAATGCTTGCCAGAAAATACTTCTAG CGTGACCCAATCCGTCGGTCTGTGACCAGCATGAGCACACATACCCCGGC ATACAGGCAAAACCCCGACGAAACCAATCGCTCCCTCTGTCTGTACCTTG CCCTCTCCCTGACCACCGCTCGGCCGATCAACTCTTACCGATGGACAATC AACTGGACTCCTCGGCCAACCCAACCAGCTACGTGGGGACTCTGGGACCG ATCTCGAGCCCGATGCACTCTCTGTATCCTGCCGACTCGGCCGTCCTGTA TATCAGCGGCTCTGACTGCGAGAGCTGCCTCTACATCCCCAACGACGGTT CTTCCCTGACGATGGGCACCCCGTACTACGTTAGAATCGCGGCCTACAAT GCGCTGGGGGCGTCCGAGATCGGCAGCGGGTCGGACGATAGCTCCTTGGT CGTGGGGGTGGTACCGAACCAGGTATGGTAGAGTGCGGGACAACAGACAT TGAGTGGCGATCATTCTGTCGAGCAAATCGGGGTCCGGGGATAAGGTGCA ATGGACGACATAGCGGCCCCGGCAGTATTCGCTCCTCGCAGAATTTTACC TCTAGGAATTTGCTGGACGAAAAAGGATCTCTCAGCGAACAGCATGCTCT GAGATCATCCGCAAATCCCTATCGTTATGAATTATTTCGGGTGTGATCTT CTCCACGTCTCACACTCACGCGAACCGACCATTGACCCGGGCCATTGTTT GCGCGACTGCTCCTCTTCGTTTTGCCAACCGTCCTTCCTCGTCTGAATGG TGCGACAACAATGGCCGAATCGAGCAGATCCCCTTCGCGCCGACGGACGT GTCGGTCACAGTGGTGTCTGGCTCGAGGCTGGACGTGTTCTTCTGCGACC CACTAATTTCCAGCGGCGACATCCGTGGCTTCCTGGTGCAGTGGGACACT GAAGAGGGCTTCGAGCAGGCTATCGGAGGAGGGAACACGGGTGGGTTACC CGTTTCATTCACTAGGCGTGCTCGCGTAGCACATGGAAAGAAGCAGCTTA TGGTGTGAAGTGCATGACTGTATGGCGAGTTTGAATGACCAGGCCGTAGA ACGCGGGGACTCCCCGCTCGTCGCCGATGCCACAGCCGGCGTTCGGCGGA AAGACGTCCTCCATAAGCAATGTCGGTTGGTAGGTTGTTCTGCAAGTCTT CCACTTTTTTATCTGCTGTAGCTGTCGCAGGGTAAAGTTTGAACTGATCC AATCACGCTGACCACTCACGTAAATTCCCGGGAAGCACGCAATATTAGCA GGAACAGCCATGTAGCGTTAGGGCTGGCGCGGCGTTTTGGCATGCCGCGG TGGACCGAAAAACGTTGGTCTACCCTCAATTGATCAGGATGAAAAACATC ACTTGAACGGTAAAAAAACGGTGGCACTGAACACGCTGATTTTGACGACT ATTGTATTTTCTTGGGGGATTAACGTGCTGGCGTTTTGGTTCCAGGCGCC GGGTGTTCCGAAATCGGGTTCGGTTCTTGTGTCGTGAGCGATGCCGCTGT GGCCGGACAGTGCCCGTACTCGCTGCTTCTCACGGGACTGTCAGGTGGCG AGGTGAGGGCACAACGACTCCGAACAAAGGTTCCACTCGTTTGCTTCTTC AGCAGAATCTCGCTCCAGTATCATGTGCATGCTGCATACGTTGGGCTAAA ATTCCGCGCTCAGCGTGGTAGAAATGACGGATACCAAGGCAAGCTCGGCT ATATCCACCACAAGTCGGTTTGTGTCTTCTTTCGGCCGGCCGAACTCCTT GATTTTGTCGGGTGTGGTTGTGGTAGAACTGTAGACATGTCAAAGAGTAT GACGCAAGGCAGAACATGGCATTGTTGACGCGAAAAACCATGTTTCGTCC TAAGCGCGTGCCCCTTTCGTGTGTGTGTTTTTCCCTCATTCGGGCTACCA GACGTATTACATTCGTGTTGCGGCGCTTGGAGACGTTGCGGCTCAACCGG TCAACCCAACGGGCGACCCGCCGGACAACACCAACTGGTCAGGGGTCATC GAGGCCGTTCCGGTGGACCAGCCGCCCAGCTCGCCAGGTCCCGTGTCAAT CTACGTGCTGGATGGATCTACGCTGCAGGTGCACATGGAGGTGCCGGCTG AGAGCGGCGGGTCTGACATCACCCAGTACATCATCGACGTCGACAGCGTG TCGACCTTCTCGTCTACCGGTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7379:1796..4517+

>mRNA_Ecto-sp13_S_contig7379.18551.1 ID=mRNA_Ecto-sp13_S_contig7379.18551.1|Name=mRNA_Ecto-sp13_S_contig7379.18551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=906bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7379:1796..4517+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATTCCATTGGCTGAGGAACACGACTGTTCAGTGACTGCATCCTACAA
AGGGGACTCCAAGACGGGATCCACGCCGTACGCCTGGGCCTACGGATACG
AATGGACCATTCATATCCTCAGCTACGTGGGGACTCTGGGACCGATCTCG
AGCCCGATGCACTCTCTGTATCCTGCCGACTCGGCCGTCCTGTATATCAG
CGGCTCTGACTGCGAGAGCTGCCTCTACATCCCCAACGACGGTTCTTCCC
TGACGATGGGCACCCCGTACTACGTTAGAATCGCGGCCTACAATGCGCTG
GGGGCGTCCGAGATCGGCAGCGGGTCGGACGATAGCTCCTTGGTCGTGGG
GGTGGTACCGAACCAGATCCCCTTCGCGCCGACGGACGTGTCGGTCACAG
TGGTGTCTGGCTCGAGGCTGGACGTGTTCTTCTGCGACCCACTAATTTCC
AGCGGCGACATCCGTGGCTTCCTGGTGCAGTGGGACACTGAAGAGGGCTT
CGAGCAGGCTATCGGAGGAGGGAACACGGGCGCCGGGTGTTCCGAAATCG
GGTTCGGTTCTTGTGTCGTGAGCGATGCCGCTGTGGCCGGACAGTGCCCG
TACTCGCTGCTTCTCACGGGACTGTCAGGTGGCGAGACGTATTACATTCG
TGTTGCGGCGCTTGGAGACGTTGCGGCTCAACCGGTCAACCCAACGGGCG
ACCCGCCGGACAACACCAACTGGTCAGGGGTCATCGAGGCCGTTCCGGTG
GACCAGCCGCCCAGCTCGCCAGGTCCCGTGTCAATCTACGTGCTGGATGG
ATCTACGCTGCAGGTGCACATGGAGGTGCCGGCTGAGAGCGGCGGGTCTG
ACATCACCCAGTACATCATCGACGTCGACAGCGTGTCGACCTTCTCGTCT
ACCGGT
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