mRNA_Ecto-sp13_S_contig7378.18550.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7378.18550.1
Unique NamemRNA_Ecto-sp13_S_contig7378.18550.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: A0A6H5KU25_9PHAE (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU25_9PHAE)

HSP 1 Score: 968 bits (2502), Expect = 0.000e+0
Identity = 532/537 (99.07%), Postives = 533/537 (99.26%), Query Frame = 1
Query:    1 MAATRASEIADFEASMSFDAPLSTSVLPRWQRKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGIAAPAVGERRDRFIPSRSSMCMSRSNYLMSKENDGGENTAPGGAGSTAAAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWTASGTHLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDASVGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAGGRGGAAGKMLSGGHMSVR 1611
            MAATRASEIADFEASMSFDAPLSTSVLPRWQRKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGIAAPAVGERRDRFIPSRSSMCMSRSNYLMSKENDGGENTAPGGAG T+AAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSS AARPTRHIPSAPVRILDAPDLLDDYYLNLLSW SNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWTASGTHLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDASVGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAGGRG AAGKMLSGGHMSVR
Sbjct:    1 MAATRASEIADFEASMSFDAPLSTSVLPRWQRKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGIAAPAVGERRDRFIPSRSSMCMSRSNYLMSKENDGGENTAPGGAGFTSAAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSGAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWGSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWTASGTHLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDASVGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAGGRGSAAGKMLSGGHMSVR 537          
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: A0A7S1TZ58_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ58_9STRA)

HSP 1 Score: 499 bits (1286), Expect = 2.380e-170
Identity = 287/513 (55.95%), Postives = 338/513 (65.89%), Query Frame = 1
Query:    1 MAATRASEIADFEASMSFDAPLSTSVLPRWQRKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGIAAPAVGERRDRFIPSRSSMCMSRSNYLM-SKENDGGENTAPGGAGSTAAAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWTASG-THLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDASVGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSK 1533
            MAAT A+EIA+ EA MSFDAPL TS +PRWQRKQL                                     G A  + GE  DRFIPSR++M M  S+Y + SKEN  GEN   G + + A+           K L+++LL          GHRVLAF+NKAPA  +GY+N LRVLY+ NKG++     +A + TRHIPSAP+RILDAPDLLDDYYLNL+SWSS + +AVALG  VYLW+A +G I+EL +LE E  YVSSVSW   G THLAVGT+   TQ WD S    +RSM+GH++RVGALAWN+H+L SGS DTT V+HD+R + H V T   H QEVCGLSWSPDGS LASG NDN  C+WDA    GR S+ A   TLT+HQAAVKALAW P ERN LA+GGGTADR IK WNA TGA+L+S+DTGSQV               HG+A+NQL LWKYPSM K K+L GHTSRVLHM  SPDG TV+S AGDETLRFW VF    K
Sbjct:    1 MAATSATEIAELEAIMSFDAPL-TSKMPRWQRKQLAASLSGE-----------------------------SGGAGDSSGEGTDRFIPSRANMDMDHSHYSVNSKEN--GENGIGGKSPAKAS---------LNKALKNSLLDK--------GHRVLAFKNKAPAPRDGYENHLRVLYTANKGAA---DKAAVKSTRHIPSAPLRILDAPDLLDDYYLNLVSWSSTNTVAVALGPSVYLWDAATGGISELMTLEDESQYVSSVSWIQEGGTHLAVGTSTALTQLWDVSATKQVRSMDGHTSRVGALAWNQHLLASGSADTTVVNHDVRVRAHNVNTWSAHEQEVCGLSWSPDGSYLASGGNDNLLCVWDA-ASVGRSSSRAFH-TLTDHQAAVKALAWSPHERNLLASGGGTADRSIKFWNAATGAMLSSIDTGSQVXXXXXXXXXXXXXXXHGFADNQLSLWKYPSMAKVKDLKGHTSRVLHMCVSPDGETVLSAAGDETLRFWSVFGGAGK 459          
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: A0A7S2WBP6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBP6_9STRA)

HSP 1 Score: 483 bits (1243), Expect = 1.150e-163
Identity = 266/513 (51.85%), Postives = 324/513 (63.16%), Query Frame = 1
Query:   10 TRASEIADFEASMSFDAPLSTSVLPRWQRKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQGIAAPAVGERRDRFIPSRSSMCMSRSNYLMSKENDGGENTAPGGAGSTAAAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWTASGT-HLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDASVGTGRFSTA----APRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSK 1533
            T   E  + E  ++F+  +   V PRW+RK L                                   A+G   P    + DRFIP+R +M ++ +++ + KEN+           + + AVD     EF K L +++         A  HRVLAF+ KAPA  EGY+N L+VLY+QNK    +      +P RHIPSAP RILDAPDLLDDYYLNL+ W S+++LAVALGQ VYLWNA++G I ELC  EGE DY++SV +   G  +LAVGT   ET+ WD  T  +LR+M+GHSARV +LAWN+H+L+SGSRD+T VHHD+R  +H VG + GH QEVCGL+WSPDG TLASG NDN  CLWDA    G    A    APR  +++H AAVKALAWCP +RN LA+GGGTADR IK WNA  GA LNSVDTGSQV S             HG++ENQLCLWKYPSMVKTKELSGHTSRVLHMA SPDG  V SGA DETLRFW VF  PSK
Sbjct:    5 TYVQEQMELEDCLNFNQEIDCEVQPRWKRKALQQRVAKTPKSGRKRSRSKTP---------------AKGKNTP----QHDRFIPNRGAMDLANAHFNLMKENNS----------AASNAVDSPTRAEFNKALANSM--------GAGDHRVLAFKKKAPAPPEGYENSLKVLYTQNK----AKLGKTHKPARHIPSAPERILDAPDLLDDYYLNLVDWGSSNMLAVALGQTVYLWNAETGGIEELCQCEGEDDYITSVKFVQEGGGYLAVGTNFCETKLWDIETSKLLRNMDGHSARVSSLAWNQHILSSGSRDSTIVHHDVRVAQHKVGVMEGHLQEVCGLTWSPDGQTLASGGNDNLLCLWDARYADGGSQAARAIQAPRLKISDHLAAVKALAWCPHQRNVLASGGGTADRTIKMWNAANGACLNSVDTGSQVCSXXXXXXXXXXXXXHGFSENQLCLWKYPSMVKTKELSGHTSRVLHMALSPDGTMVCSGAADETLRFWKVFEEPSK 476          
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: A0A7S4K372_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K372_9STRA)

HSP 1 Score: 481 bits (1237), Expect = 2.620e-162
Identity = 257/448 (57.37%), Postives = 311/448 (69.42%), Query Frame = 1
Query:  229 PAVGERRDRFIPSRSSMCMSRSNYLMSKENDGGENT--APGGAGSTAAAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQD-YVSSVSWTASG-THLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDASVGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAGG 1560
            PA     DRFIP+R++M + RS + +   +   E T  A G  G+ +A+       E++  L S++LG    + ++  HRVL+F++KAPA +    N L+VLYS +  +S  S   +    R IPSAP RILDAPDLLDDYYLNLLSW ++++LAVAL Q VYLWNA +GDI ELC+L+G  D ++SSVSW   G  HLAVGT+ G TQ WD +    LRSM+GH+ RVGAL+WN H+L+SG RD+  V+HD+R  RH   TL  HTQEVCGL+WSPDG TLASG+NDNT CLWDA+      ST+ PRF LT+HQAAVKALAW P ERN LATGGGTADR IK WN QTGALLNS+DTGSQV              SHG+A NQLCLWKYP+M K KEL GHT+RVLHMA  PDG TVVS A DETLRFWDVFAPP K +   G GG
Sbjct:   73 PAASVGGDRFIPNRAAMDIERSAHSLQSMSIEEERTDSAEGENGAVSASC----KSEYKSALSSSMLGMDEDSQSS-SHRVLSFKDKAPAPKGDTVNNLKVLYSSSGSTSSKSGQGSKLVNRQIPSAPSRILDAPDLLDDYYLNLLSWGASNILAVALSQTVYLWNAGTGDIQELCTLDGAADAHISSVSWVQEGGAHLAVGTSAGSTQLWDVNQCKQLRSMDGHTERVGALSWNRHILSSGGRDSIVVNHDVRVARHNTATLSAHTQEVCGLAWSPDGMTLASGANDNTLCLWDAATS----STSTPRFRLTDHQAAVKALAWSPHERNLLATGGGTADRTIKFWNGQTGALLNSIDTGSQVCXXXXXXXXXXXXXSHGFARNQLCLWKYPTMAKIKELDGHTARVLHMACGPDGSTVVSAAADETLRFWDVFAPPGKVAGKRGPGG 511          
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: A0A448ZKN3_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZKN3_9STRA)

HSP 1 Score: 475 bits (1222), Expect = 6.510e-160
Identity = 259/465 (55.70%), Postives = 318/465 (68.39%), Query Frame = 1
Query:  250 DRFIPSRSSMCMSRSNY-LMSKENDGGENTAPGGAGSTAAAVDGGNSG--EFQKV------------LESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQD---YVSSVSWTASG-THLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDASVGTGRFSTAA-PRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAGGRGGAAGKM 1584
            DRFIP+R+ M +  S + L  +  D   +++   + S   + DGG S   E QKV            L + LLG    A +    R+++F  KAP  +    N L +LYS +  + +  ++S    +R IPSAP R+LDAPDLLDDYYLNLLSWS  ++LAVAL   VYLWNA +GDI ELC+ E  +    ++SSV+W   G  HLAVGT+GG+TQ WD      LRSM+GHS R+ ++AWN H+L+SGSRDT+ V+HD+R  RHA  TL  HTQEVCGL+WS DG TLASG NDN  CLWDAS      S    PRF +T+HQAAVKALAW P +RN LATGGGTADRCIK WN++ GALLNS+DTGSQV +L W+  EKE+LSSHGYA NQ+CLWKYPSM K KEL GHTSRVLHMA SPDG TVVS AGDETLRFW++FAPPSK+S+     GRGG   K+
Sbjct:   72 DRFIPNRAGMNVKLSQHNLRGETTDSSSHSSRSSSSSDIQSTDGGVSEQTENQKVVSDANKDVYSSQLSAALLGVEDKANS----RIMSFAXKAPIPKGDTVNNLNILYSASASAGQKKTNSKLV-SRAIPSAPTRVLDAPDLLDDYYLNLLSWSDTNILAVALANTVYLWNAGTGDIQELCTYEEGESVDAHISSVAWVQEGGAHLAVGTSGGKTQLWDVQACKQLRSMDGHSDRISSMAWNRHILSSGSRDTSIVNHDVRVARHATSTLSAHTQEVCGLAWSNDGETLASGGNDNLLCLWDASASLSSISNRQEPRFRMTDHQAAVKALAWSPHDRNLLATGGGTADRCIKFWNSKNGALLNSIDTGSQVCALQWNPFEKEILSSHGYARNQICLWKYPSMTKIKELEGHTSRVLHMATSPDGSTVVSAAGDETLRFWEIFAPPSKASASSEIIGRGGMPSKL 531          
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: A0A8K1CPY5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPY5_PYTOL)

HSP 1 Score: 472 bits (1214), Expect = 2.870e-159
Identity = 255/443 (57.56%), Postives = 321/443 (72.46%), Query Frame = 1
Query:  250 DRFIPSRSSMCM----SRSNYLMSKENDGGENTAPGGAGSTAAAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNK-APAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWT--ASGTHLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDAS-VGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGA 1554
            DRFIP+RS+M M    SR++    +     E+   G     AA  +      ++K L S LLG+         H++L F  K A    E +Q+ L   +S NK SS   +++A +  R++PSAP+++LDAP+L++DYYLNLLSW SN++LAVALGQCVYLWNA++G+I EL +LEG+ DYVSSV W+  +  +HLA+GT+    Q WD +    +RSMNGHS+RVGALAWN ++L+SGSRD++ +HHD+R ++H V TL  H QEVCGLSWSPDG+TLASG NDNT CLW +S +G+   ST  P   L +H AAVKA+AWCP+ERN LATGGGTADR IK WN   GALLNSVDTGSQV SLLWST+EKELLSSHGY++N+LCLWKYPSM K KEL+GHTSRVLH+AASPDG TVVSGA DETLRFW VF    K+S  GG+
Sbjct:   55 DRFIPNRSAMNMDVVQSRTSPSRPESPCDSESEKHG-----AAQAEDEEKTMYKKRLASALLGNEDGEK----HKILKFTAKPAVPPPESFQSSLHARFSHNKVSS-IPAANARKLNRYVPSAPIKVLDAPELMNDYYLNLLSWGSNNILAVALGQCVYLWNAETGEIDELMTLEGD-DYVSSVQWSDVSGSSHLAIGTSDSVVQLWDVAASKQVRSMNGHSSRVGALAWNNYILSSGSRDSSIIHHDVRARQHNVATLSSHEQEVCGLSWSPDGTTLASGGNDNTLCLWKSSTIGS---STQEPAHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTSEKELLSSHGYSQNELCLWKYPSMAKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKASKSGGS 483          
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: A0A5D6XRA5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA5_9STRA)

HSP 1 Score: 466 bits (1199), Expect = 7.660e-158
Identity = 245/412 (59.47%), Postives = 302/412 (73.30%), Query Frame = 1
Query:  349 AGSTAAAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNK--APAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWTASG--THLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDAS-VGTG----RFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAG 1557
            AGS+A A +      ++K L S LLG   A  A   H++L F  K  APA E  + + L   +S NK S+   +++A +  R++PSAPV++LDAP+L++DYYLNLLSW SN+ LAVALGQCVYLWNA SG+I EL +L+G+ DYVSSV W+  G  +HLA+GT+    Q WD +    +R+M GH++RVGALAWN H+L+SGSRD+T +HHD+R + H + TL  H QEVCGL WSPDG+TLASG NDN  CLW AS +G+G         +P   L  H AAVKA+AWCP+ERN LATGGGTADR IK WN   GALLNSVDTGSQV +LLWSTTEKE+LSSHGY++N+LCLWKYPSM K KEL+GHTSRVLH+AASPDG TVVSGA DETLRFW VF P  K+S  G +G
Sbjct:   21 AGSSAGAAEDEEKHNYKKRLASALLGDDAADGAR--HKILKFTAKPAAPAPES-FASSLAARFSHNKASA-VPAAAAKKLNRYVPSAPVKVLDAPELMNDYYLNLLSWGSNNTLAVALGQCVYLWNADSGEIDELMALDGD-DYVSSVQWSDVGGSSHLAIGTSESVVQLWDVAAQKQVRAMGGHASRVGALAWNSHILSSGSRDSTIIHHDVRARTHQLATLASHEQEVCGLQWSPDGTTLASGGNDNALCLWKASAIGSGGXXXXXXXQSPAHRLEHHSAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGALLNSVDTGSQVCALLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGPNRKASKAGSSG 427          
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: A0A1E7FKR1_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKR1_9STRA)

HSP 1 Score: 466 bits (1199), Expect = 1.040e-157
Identity = 248/423 (58.63%), Postives = 292/423 (69.03%), Query Frame = 1
Query:  280 CMSRSNYLMSKENDGGENTAPGGAGSTAAAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLE--GEQD-YVSSVSWTASG-THLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDASVGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKS 1536
            C S S+ L S E  GGE+            V   N  E+   L S LLG   AA +    R+++F  KAP Q+    N L +LYS +  S+    ++    +R IPSAP R+LDAPDL+DDYYLNLLSWS  +VLAVAL   VYLWNA +GDI ELC+ E  G  D ++SSV+W   G  HLAVGT+GG TQ WD      LRSM+GHS R+G++AWN H+L+SGSRDT  ++HD+R  RHAV TL  H+QEVCGL+WS DG  LASG NDN  CLWDAS  +   +   PRF +T+HQAAVKALAW P ERN LATGGGTADRCIK WN+QTGALLNS+DTGSQV +           SSHGYA NQ+CLWKYPSM K KEL GHTSRVLH+A SPDG TVVSGAGDETLRFW+VFAPPSKS
Sbjct:   14 CSSSSSSLPSSE--GGESEESNSVSDNQKVVSDANKDEYSSRLSSALLGVDDAANS----RIMSFAEKAPVQKGDTVNNLNILYSAS-ASATQKKTNTKLVSRSIPSAPSRVLDAPDLMDDYYLNLLSWSDTNVLAVALANTVYLWNAGTGDIQELCTYEEGGSVDSHISSVAWVQEGGAHLAVGTSGGTTQLWDVHARKQLRSMDGHSDRIGSMAWNRHILSSGSRDTNIINHDVRVARHAVSTLSAHSQEVCGLTWSNDGEILASGGNDNLLCLWDASASSSMSTRMEPRFKMTDHQAAVKALAWSPHERNLLATGGGTADRCIKFWNSQTGALLNSIDTGSQVCAXXXXXXXXXXXSSHGYARNQICLWKYPSMAKIKELEGHTSRVLHLATSPDGSTVVSGAGDETLRFWEVFAPPSKS 429          
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: K3X281_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X281_GLOUD)

HSP 1 Score: 465 bits (1197), Expect = 1.170e-157
Identity = 240/392 (61.22%), Postives = 296/392 (75.51%), Query Frame = 1
Query:  394 FQKVLESNLLGHPPAAAAAPGHRVLAFRNK-APAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWTASG--THLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDAS-VGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDGGAG 1557
            ++K L S LLG+         H++L F  K A    + +++ L   +S NK +S   +++A +  R++PSAP+++LDAP+L++DYYLNLLSW SN+VLAVALGQCVYLWNA+SG+I EL +LEG+ DYVSSV W+  G  +HLA+GT+    Q WD +    +RSMNGHS+RVGALAWN +VL+SGSRD+T +HHD+R + H + TL  H QEVCGL WSPDG+TLASG NDN  CLW AS +G+G  S  +P   L  H AAVKA+AWCP+ERN LATGGGTADR IK WN   GALLNSVDTGSQV SLLWSTTEKE+LSSHGY++N+LCLWKYPSM K KEL+GHTSRVLH+AASPDG TVVSGA DETLRFW VF    K+S  G +G
Sbjct:   35 YKKRLASALLGNEDGER----HKILKFTAKPATPAPDSFKSSLSARFSHNK-TSAIPAAAAKKLNRYVPSAPIKVLDAPELMNDYYLNLLSWGSNNVLAVALGQCVYLWNAESGEIDELMALEGD-DYVSSVQWSDVGGSSHLAIGTSESVVQLWDVAAQKQVRSMNGHSSRVGALAWNSYVLSSGSRDSTIIHHDVRARTHQLSTLTSHEQEVCGLQWSPDGTTLASGGNDNALCLWKASSIGSGN-SIQSPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKTSKTGSSG 419          
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Match: A0A2D4BFE0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFE0_PYTIN)

HSP 1 Score: 468 bits (1203), Expect = 3.350e-157
Identity = 254/439 (57.86%), Postives = 314/439 (71.53%), Query Frame = 1
Query:  250 DRFIPSRSSMCMSRSNYLMSKENDGGENTAP--GGAGSTAAAVDGGNSGEFQKVLESNLLGHPPAAAAAPGHRVLAFRNK-APAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPSAPVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELCSLEGEQDYVSSVSWT--ASGTHLAVGTAGGETQFWDSSTLTMLRSMNGHSARVGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPDGSTLASGSNDNTCCLWDAS-VGTGRFSTAAPRFTLTEHQAAVKALAWCPFERNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSSHGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETLRFWDVFAPPSKSSSDG 1548
            DRFIP+RS+M M       S    G  +  P  G   + +   +      ++K L S LLG+         H++L F  K A    E +Q+ L+  +S NK SS   +++A +  R++PSAP+++LDAP+L++DYYLNLLSW SN++LAVALGQCVYLWNA++GDI EL +LEG+ DYVSSV W+     +HLA+GT+    Q WD + +  +RSMNGHSARVGALAW+ ++L+SGSRD+  +HHD+R ++H V  L  H QEVCGL WSPDG+TLASG NDNT CLW AS +G+G   T AP   L  H AAVKA+AWCP+ERN LATGGGTADR IK WN   GALLNSVDTGSQV SLLWSTTEKELLSSHGY++N+LCLWKYPSM K KEL+GHTSRVLH+AASPDG TVVSGA DETLRFW VF    K+S  G
Sbjct:   79 DRFIPNRSAMNMDVVACRTSPSR-GSPSPEPVVGEKRNASQQPEDEEKAMYKKRLASALLGNDEGEK----HKILKFTAKPAVPPPESFQSSLQARFSHNKISS-IPTANARKLNRYVPSAPIKVLDAPELMNDYYLNLLSWGSNNILAVALGQCVYLWNAETGDIDELMTLEGD-DYVSSVQWSDVTGSSHLAIGTSDSVVQLWDVAAMKQVRSMNGHSARVGALAWSNYILSSGSRDSNIIHHDVRARQHNVAVLSSHEQEVCGLQWSPDGTTLASGGNDNTLCLWKASMIGSGS-RTHAPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTANGALLNSVDTGSQVCSLLWSTTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKASKAG 509          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7378.18550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU25_9PHAE0.000e+099.07ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto... [more]
A0A7S1TZ58_9STRA2.380e-17055.95Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WBP6_9STRA1.150e-16351.85Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S4K372_9STRA2.620e-16257.37Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A448ZKN3_9STRA6.510e-16055.70Uncharacterized protein n=2 Tax=Pseudo-nitzschia T... [more]
A0A8K1CPY5_PYTOL2.870e-15957.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XRA5_9STRA7.660e-15859.47Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1E7FKR1_9STRA1.040e-15758.63WD40 repeat-like protein n=1 Tax=Fragilariopsis cy... [more]
K3X281_GLOUD1.170e-15761.22Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BFE0_PYTIN3.350e-15757.86Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7378contigEcto-sp13_S_contig7378:1668..5454 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score883.2
Seed ortholog evalue5.9e-254
Seed eggNOG ortholog2880.D7G293
Preferred nameCDC20
Model size1614
KEGG koko:K02084,ko:K03363,ko:K06709
KEGG Pathwayko01524,ko04110,ko04111,ko04113,ko04114,ko04115,ko04120,ko04210,ko04214,ko04215,ko05010,ko05012,ko05014,ko05016,ko05134,ko05152,ko05161,ko05166,ko05200,ko05203,ko05222,map01524,map04110,map04111,map04113,map04114,map04115,map04120,map04210,map04214,map04215,map05010,map05012,map05014,map05016,map05134,map05152,map05161,map05166,map05200,map05203,map05222
KEGG ModuleM00389,M00685
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000151,GO:0000152,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000819,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007062,GO:0007064,GO:0007088,GO:0007096,GO:0007127,GO:0007135,GO:0007143,GO:0007144,GO:0007147,GO:0007275,GO:0007276,GO:0007292,GO:0007346,GO:0007399,GO:0008022,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010498,GO:0010564,GO:0010604,GO:0010646,GO:0010720,GO:0010939,GO:0010941,GO:0010975,GO:0015630,GO:0016043,GO:0016567,GO:0016579,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0019827,GO:0019899,GO:0019941,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030154,GO:0030162,GO:0030163,GO:0030718,GO:0031145,GO:0031323,GO:0031325,GO:0031344,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031915,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0036211,GO:0040020,GO:0042127,GO:0042826,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043900,GO:0043902,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045595,GO:0045597,GO:0045664,GO:0045787,GO:0048167,GO:0048285,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050803,GO:0050804,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051225,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051276,GO:0051321,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051445,GO:0051446,GO:0051603,GO:0051704,GO:0051726,GO:0051783,GO:0051960,GO:0051962,GO:0060255,GO:0060281,GO:0060282,GO:0060284,GO:0060547,GO:0060548,GO:0061630,GO:0061659,GO:0061982,GO:0061983,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0070925,GO:0071704,GO:0071840,GO:0080090,GO:0090068,GO:0090128,GO:0090129,GO:0090307,GO:0097150,GO:0098687,GO:0098727,GO:0098813,GO:0099177,GO:0120035,GO:0140013,GO:0140014,GO:0140096,GO:1900193,GO:1900195,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901990,GO:1902494,GO:1902850,GO:1903046,GO:1903047,GO:1903320,GO:1903322,GO:1903429,GO:1903431,GO:1903538,GO:1904146,GO:1904666,GO:1904668,GO:1905879,GO:1905881,GO:1990234,GO:2000026,GO:2000241,GO:2000243
Exons2
EggNOG free text desc.Cell division cycle
EggNOG OGsCOG2319@1,KOG0305@2759
Ec32 ortholog descriptionPutative cell division cycle 20. Subunit or the Anaphase Promoting Complex
Ec32 orthologEc-16_002010.1
Cds size1614
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464006.253199-CDS-Ecto-sp13_S_contig7378:1667..26901681464006.253199-CDS-Ecto-sp13_S_contig7378:1667..2690Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7378 1668..2690 +
1681464006.275132-CDS-Ecto-sp13_S_contig7378:4863..54541681464006.275132-CDS-Ecto-sp13_S_contig7378:4863..5454Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7378 4864..5454 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7378.18550.1prot_Ecto-sp13_S_contig7378.18550.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7378 1668..5454 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7378.18550.1

>prot_Ecto-sp13_S_contig7378.18550.1 ID=prot_Ecto-sp13_S_contig7378.18550.1|Name=mRNA_Ecto-sp13_S_contig7378.18550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=538bp
MAATRASEIADFEASMSFDAPLSTSVLPRWQRKQLQQQQQQQQQAQQQLK
DTADVSTCSASSSSSSSTSSAQGIAAPAVGERRDRFIPSRSSMCMSRSNY
LMSKENDGGENTAPGGAGSTAAAVDGGNSGEFQKVLESNLLGHPPAAAAA
PGHRVLAFRNKAPAQEEGYQNGLRVLYSQNKGSSRSSSSSAARPTRHIPS
APVRILDAPDLLDDYYLNLLSWSSNDVLAVALGQCVYLWNAKSGDITELC
SLEGEQDYVSSVSWTASGTHLAVGTAGGETQFWDSSTLTMLRSMNGHSAR
VGALAWNEHVLTSGSRDTTAVHHDLRTQRHAVGTLRGHTQEVCGLSWSPD
GSTLASGSNDNTCCLWDASVGTGRFSTAAPRFTLTEHQAAVKALAWCPFE
RNTLATGGGTADRCIKTWNAQTGALLNSVDTGSQVLSLLWSTTEKELLSS
HGYAENQLCLWKYPSMVKTKELSGHTSRVLHMAASPDGRTVVSGAGDETL
RFWDVFAPPSKSSSDGGAGGRGGAAGKMLSGGHMSVR*
back to top

mRNA from alignment at Ecto-sp13_S_contig7378:1668..5454+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7378.18550.1 ID=mRNA_Ecto-sp13_S_contig7378.18550.1|Name=mRNA_Ecto-sp13_S_contig7378.18550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3787bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7378:1668..5454+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAGCTACCCGCGCAAGCGAAATCGCCGACTTCGAGGCATCCATGTC CTTCGACGCGCCGCTCAGCACCTCGGTCCTGCCGCGGTGGCAGCGCAAGC AGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGGCCCAGCAGCAGCTCAAG GACACCGCGGACGTCTCTACCTGCTCTGCTTCGTCCTCGTCATCTTCATC AACGTCTTCCGCCCAGGGAATCGCGGCGCCAGCGGTCGGCGAGAGACGGG ACCGCTTCATTCCCAGCCGCTCCTCCATGTGCATGAGCAGGTCCAACTAC CTCATGAGCAAGGAGAACGACGGCGGGGAGAACACGGCTCCCGGCGGCGC TGGATCCACGGCCGCGGCGGTCGACGGCGGTAACAGCGGCGAGTTCCAGA AAGTGCTTGAGTCCAACCTTCTCGGCCACCCGCCCGCCGCCGCCGCGGCT CCCGGCCACCGCGTGCTCGCCTTCCGCAACAAGGCTCCCGCGCAGGAGGA GGGCTACCAGAACGGGCTCCGCGTCCTCTACAGCCAGAACAAGGGCTCCT CCCGCTCCTCCTCCTCCAGCGCCGCCCGTCCCACGCGGCACATCCCCTCC GCCCCCGTTCGCATCCTCGATGCGCCCGACCTCCTCGACGATTACTACCT GAACCTGCTCTCCTGGAGCTCCAACGACGTCCTCGCGGTGGCCCTGGGCC AGTGCGTCTACCTCTGGAACGCGAAGAGCGGCGACATCACCGAGCTCTGC AGCCTGGAGGGGGAGCAGGACTACGTCTCCTCGGTGTCGTGGACGGCCAG CGGCACTCACCTGGCGGTAGGCACCGCGGGCGGCGAGACTCAGTTCTGGG ACTCGTCCACCCTCACCATGCTCCGCAGCATGAACGGCCACAGCGCGCGC GTCGGAGCCCTCGCGTGGAACGAGCACGTCCTCACCTCCGGCTCCCGCGA CACCACGGCGGTGCACCACGACCTTCGAACGCAGCGGCACGCGGTGGGCA CGCTACGAGGGCACACACAGGAGGTGAGACAGAGAGAAAGGCGTAAAATA TACGAGTCTCATTCCTGTACTGATATATGTATCGTTTGAGTGCTTTTTTG TGTGGGGTGGGTCCGCCGCGTATCTTGCCTTTGCCGTTAACAATTTTCTC ACTTGAACTGCGAGACACCGCTGTGCCCAACACACACGCGTGCAGCTCGC GTCCTGAAATGTACTATTGAAGAGACGAAGGGACGTTTTGCAGCAGAGGC AAGCTTTTTTTTCCGTGTGTTTTTTTTTACGCGTGCGCTACATCTCTTTG CGCATTTTATTCCTCTGTGTCAAGGGCCAGACTTGACTAGTTAATGGATT GGTTCATCGTGATAACATGTACTACACGGCACATAAAAAAACACAAGAAC CTTATACACACGGCACGACCCGGATAACCTGAGCATCGTTGTTGTTGTTG GTGGTTATGCCCGTGTGCAGCGCGCTCCCTGATCGTTACAACCTAAGTAT TGTAATCCTCCTTTTTAAAAGTGTGCGCTTCAGGCTGAGTCTTTCGGCTT GATTTTTTCCGGTTCGGATTTAGGGGGGGGTCCTTGTCTGAGCCCAAAAA ATTATTGCGGTCTTACGGGTAGGAAGATGGCAAATTCCAACAGCCCAAAA TCCAGCAGCGCAAACCTCAACCGCAATTCCGGCCGGCCTGTTGGAAAATT GGCCCATTTTCCAACAGCGATCCGTTGGAAAATCGCTTTTAGAAATGAGG GGGGTTACCCCCTGGTCACACCCCGATCGTGCCAGAACGAGGAGCTACAC CGTCCGCTGGCTAAACAGAGGCCAGTATCATGAGGTCATGCACAAACCCT CTGCAGGTACCTAAAAGTCAGGGCGTCCTGCGCCATGTCGGCTGCACACG AGCCGAAAACGTCAACCCTACCACATTGCTCTGCTGACGTTCTTACCTTG CGGCCGAAAAGAGCCGTTTTTGCGCCTGCTGCATGTGTGACCAGTTGAAA ACGCACGCCAGAGAGAGGCCTTAGCCGTCGATGTCCACATACTGCAGCCA ATGGCATGTGGTCATACTCAAACCCTCTGCTCGCGTACAAGCAACAAAGC GTGTTGTCCAGTTTTGATTGCGAACGGCCTGTAAACGTGAACCAAGAGTG TTGCGTTGTTGATTTGTTGGGCTTTTTCTTTGTTCTGCCGCGTGTTTGCT CCGTGTGTCACCGCGACCAGTCAAAAACGCATGCCAGAGAGAGGCAGTTG GCCGACGACATTCACAAACAGAAGCCAGTGGCGTGTGCTCATACACATAC CCTCTGCTCGCGTCCCAAAAATAGAGCGTACTGTCCAGTTTTGATTGCAC ACGACCTGCAAACGTGGACCGAGGTGTGGTTAGCTGTTGCCTTTTTTTTC TGCTGCTTGCTCCGAGTCGAGTGTGATCAGTGTACAACGCATGCCATCAG AGAGAGGCCTTTGGCCGACAACAGCCACAAACTGCAGCCGATAGCGTGCG ATGATACACATGCCCTCTGTAGGCAACCCATAAACAGGGCGCTCGGCGTC TTGTTGGTAGCACGCGAGCCAAAACCGTGTTCTGAAGAATCTTGTGACCC ACAAGAACATGAACCAGCCTCTTTTCTCCTTTCAGCAAAAAAAATATCTC GGAAAACCGTCAAGACGGTCGTTTTGATCTTGATACTTCCTTCCGCGCGG GCCACACCCCTGACCGAGAGAAAGAAAATCTCCGAAAAAATCAAGCCTCA AGACGCAGCCTCATAAGTTGGCGCTCTTTGTTTGCCGTTTGCGCGGAGGG CCGAAAGTGCCTTAATTTTTAGCGGGGTTGGTTTGTCGGGCAATTGCAAT CATAACAATTGGAGAAAAAAGCTTGCACAAACAAGCCTTTGTCTACCACA CGAGCCGTTTGACCCGGGCATCGTTTTGTGGTTGTAGTTGTTGGTGACGG TGCCGTTCGCTTGATGCTTGTCTCTGCCACAACTCTCTTCCTTGGTGCTG TTCGACGCAAACACGTTGTTATGTTTCGTTGTCACATTTTATCTAATGAA CTACGCGCTGCCACCAACAAGTAAATGACCCGCACGAGCGCAAACGATGC ATGCATCCTAACCTATCCCCTTGAACAATGGTATACTCTGTATATTCACC CGCCCCCCCTGCCCTCCCCGCCTCCCTCTTCCCCCCCACCCTGCAGGTCT GCGGCCTGAGCTGGTCCCCGGACGGCAGCACCCTCGCCTCCGGCAGCAAC GACAACACCTGCTGCCTGTGGGATGCTTCGGTCGGGACGGGCCGCTTCTC CACCGCGGCGCCGCGTTTCACCCTGACGGAGCACCAGGCGGCCGTCAAGG CCCTCGCGTGGTGCCCGTTCGAGCGCAATACGCTGGCCACGGGCGGAGGC ACCGCCGACCGCTGCATCAAGACGTGGAACGCCCAGACCGGCGCGCTGCT CAACTCGGTCGACACCGGCAGCCAGGTACTCTCCCTGCTCTGGTCCACCA CCGAGAAGGAGCTGCTCTCCAGCCACGGCTACGCCGAGAACCAGCTCTGT TTGTGGAAGTACCCGTCCATGGTAAAGACGAAGGAGCTGTCGGGGCACAC CTCCCGCGTGCTCCACATGGCGGCGTCCCCCGACGGGCGCACCGTGGTGT CCGGCGCCGGCGACGAGACCCTGCGCTTCTGGGACGTGTTCGCGCCCCCG TCCAAGTCGTCCTCCGACGGCGGAGCCGGTGGCCGGGGCGGCGCCGCGGG GAAGATGCTCTCCGGGGGGCACATGAGCGTCAGGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7378:1668..5454+

>mRNA_Ecto-sp13_S_contig7378.18550.1 ID=mRNA_Ecto-sp13_S_contig7378.18550.1|Name=mRNA_Ecto-sp13_S_contig7378.18550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1614bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7378:1668..5454+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAGCTACCCGCGCAAGCGAAATCGCCGACTTCGAGGCATCCATGTC
CTTCGACGCGCCGCTCAGCACCTCGGTCCTGCCGCGGTGGCAGCGCAAGC
AGCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGGCCCAGCAGCAGCTCAAG
GACACCGCGGACGTCTCTACCTGCTCTGCTTCGTCCTCGTCATCTTCATC
AACGTCTTCCGCCCAGGGAATCGCGGCGCCAGCGGTCGGCGAGAGACGGG
ACCGCTTCATTCCCAGCCGCTCCTCCATGTGCATGAGCAGGTCCAACTAC
CTCATGAGCAAGGAGAACGACGGCGGGGAGAACACGGCTCCCGGCGGCGC
TGGATCCACGGCCGCGGCGGTCGACGGCGGTAACAGCGGCGAGTTCCAGA
AAGTGCTTGAGTCCAACCTTCTCGGCCACCCGCCCGCCGCCGCCGCGGCT
CCCGGCCACCGCGTGCTCGCCTTCCGCAACAAGGCTCCCGCGCAGGAGGA
GGGCTACCAGAACGGGCTCCGCGTCCTCTACAGCCAGAACAAGGGCTCCT
CCCGCTCCTCCTCCTCCAGCGCCGCCCGTCCCACGCGGCACATCCCCTCC
GCCCCCGTTCGCATCCTCGATGCGCCCGACCTCCTCGACGATTACTACCT
GAACCTGCTCTCCTGGAGCTCCAACGACGTCCTCGCGGTGGCCCTGGGCC
AGTGCGTCTACCTCTGGAACGCGAAGAGCGGCGACATCACCGAGCTCTGC
AGCCTGGAGGGGGAGCAGGACTACGTCTCCTCGGTGTCGTGGACGGCCAG
CGGCACTCACCTGGCGGTAGGCACCGCGGGCGGCGAGACTCAGTTCTGGG
ACTCGTCCACCCTCACCATGCTCCGCAGCATGAACGGCCACAGCGCGCGC
GTCGGAGCCCTCGCGTGGAACGAGCACGTCCTCACCTCCGGCTCCCGCGA
CACCACGGCGGTGCACCACGACCTTCGAACGCAGCGGCACGCGGTGGGCA
CGCTACGAGGGCACACACAGGAGGTCTGCGGCCTGAGCTGGTCCCCGGAC
GGCAGCACCCTCGCCTCCGGCAGCAACGACAACACCTGCTGCCTGTGGGA
TGCTTCGGTCGGGACGGGCCGCTTCTCCACCGCGGCGCCGCGTTTCACCC
TGACGGAGCACCAGGCGGCCGTCAAGGCCCTCGCGTGGTGCCCGTTCGAG
CGCAATACGCTGGCCACGGGCGGAGGCACCGCCGACCGCTGCATCAAGAC
GTGGAACGCCCAGACCGGCGCGCTGCTCAACTCGGTCGACACCGGCAGCC
AGGTACTCTCCCTGCTCTGGTCCACCACCGAGAAGGAGCTGCTCTCCAGC
CACGGCTACGCCGAGAACCAGCTCTGTTTGTGGAAGTACCCGTCCATGGT
AAAGACGAAGGAGCTGTCGGGGCACACCTCCCGCGTGCTCCACATGGCGG
CGTCCCCCGACGGGCGCACCGTGGTGTCCGGCGCCGGCGACGAGACCCTG
CGCTTCTGGGACGTGTTCGCGCCCCCGTCCAAGTCGTCCTCCGACGGCGG
AGCCGGTGGCCGGGGCGGCGCCGCGGGGAAGATGCTCTCCGGGGGGCACA
TGAGCGTCAGGTGA
back to top