prot_Ecto-sp13_S_contig73627.18535.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig73627.18535.1
Unique Nameprot_Ecto-sp13_S_contig73627.18535.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
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BLAST of mRNA_Ecto-sp13_S_contig73627.18535.1 vs. uniprot
Match: A0A6H5KUW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW1_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.030e-28
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0 
Query:    1 VTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVM 56
            VTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDV+
Sbjct:   81 VTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVI 136
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BLAST of mRNA_Ecto-sp13_S_contig73627.18535.1 vs. uniprot
Match: D7G152_ECTSI (Mcl1_mid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G152_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 8.400e-28
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0 
Query:    1 VTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVM 56
            VTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDV+
Sbjct:   71 VTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVI 126
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73627.18535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUW1_9PHAE2.030e-2898.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G152_ECTSI8.400e-2898.21Mcl1_mid domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig73627contigEcto-sp13_S_contig73627:479..649 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig73627.18535.1mRNA_Ecto-sp13_S_contig73627.18535.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig73627 479..649 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig73627.18535.1 ID=prot_Ecto-sp13_S_contig73627.18535.1|Name=mRNA_Ecto-sp13_S_contig73627.18535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
VTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGM
KDGDVM*
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