prot_Ecto-sp13_S_contig122.1852.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig122.1852.1
Unique Nameprot_Ecto-sp13_S_contig122.1852.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length748
Homology
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BLAST of mRNA_Ecto-sp13_S_contig122.1852.1 vs. uniprot
Match: D8LL20_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL20_ECTSI)

HSP 1 Score: 1261 bits (3263), Expect = 0.000e+0
Identity = 685/732 (93.58%), Postives = 695/732 (94.95%), Query Frame = 0 
Query:   18 MQLVLRSASLHXXXXXXXXXXXXXXXXATASVVASELMAVSVGLDLAMLCESNTIRAVSLLDVPDAAAHAPSGSIIRTPSSAQQRREDDPFHTVSFSADCAPRPGDDIIPSDSIPPKTPIKGLQFSPSGHSLLIWGESYVAVARLPRTARTTSGSNPTHGVPPATPFLSPPRDLTASGRRPGMAGGDGSSGDRSARWKWTLVDMSGYAVDVMRQRIVHAAWHPASDGCVTLLTAGKDDVYVAVAGVGAKAFVMLHVPGRERPEQVLPIPDGPNVSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWSATCDTLVAARWEQAHQSGTDSQRQSALDEEVARLEQQKAWLRETFSHVFDGQDNDGTATTVLAGGALVARTPRHLVLQDRILAGRTGENAGAACGLAVLQGVGGGXXXXXXXXXXAPAPVVLAVAYREGWVDIALVPADVSPRWSERAGQCVSCAAAAAGGEG-ETSGAVLESLDLAERLEDKTARRRQGLSLSAGGSAPWTLLAATPCRVASVTVTWAGRIQRAAERARERAAQDRPGTNRTSGGGRLDGDLRAVLRERPDSQVNEVLFVPRCSSGRIVGVVPVDSPIVGHLAMARLAGGHVEMVNVGVMTLQASMSCATEVASAAKRAEAQHTPGRGDMLPRFEAALQKAKKDIGELQANRPLALAAGHLKMSQLDQNGVRVVEEEADRLVDGGVVVLEKLHLKV 748
            MQLVLRSASLH  XXXXXXXXXXXXX ATASVVASELMAVS GL LAMLC SNTIRAVSL+DVPDAAAHAPS   IRTPSSAQQRREDDPFH VSFSADCAPRPGDD+IPSDSIPPKTPIKGLQFSPSGHSLLIWGESYVAVARLPR+ARTT GSNPTHGVPPATPFLSPPRDLTASGRR G AGGDG+SGD+SARWKWTLVDMSGYAVDVMRQRIVHAAWHPASDGCVTLLTAGKDDVYVAVAGVGAKAFVMLHVPGRERPEQVLPIPDGPNVSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWSATCDTLVAARWEQAHQSGTDSQ+QSALDEEVARLEQQK WLRETFSHVF GQDNDGTA  V AGGALVARTPRHLVLQDRILAGRTGENAGAACGLAVLQGVGG XXXXXXXXXX    VVLAVAYREGWVDIALVPA VSPRWSERAGQ VSCAAAAAGG G ETSGAVLESLDLAER+EDKTARRRQGLSLSAGGSA WTLLAATPCRVASVTVTWAGRIQRAAERARERAAQDRPGTN +SG GRLDGDLRAVLRERPDSQVNEVLFVPRCSSGRIVGVVPVDSPIVGHLAMARLAGGHVEMVNVGVMTLQA     TEVASAAKRAEAQ TPGRGDMLPRFEAALQKAKKDIGELQANRPLALAAGHLKMSQLDQ GVRVVEE+ADRLVDGGVVVLEKLHLK+
Sbjct:    1 MQLVLRSASLHPPXXXXXXXXXXXXXGATASVVASELMAVSAGLHLAMLCRSNTIRAVSLMDVPDAAAHAPSSGSIRTPSSAQQRREDDPFHAVSFSADCAPRPGDDVIPSDSIPPKTPIKGLQFSPSGHSLLIWGESYVAVARLPRSARTTGGSNPTHGVPPATPFLSPPRDLTASGRRRGTAGGDGTSGDKSARWKWTLVDMSGYAVDVMRQRIVHAAWHPASDGCVTLLTAGKDDVYVAVAGVGAKAFVMLHVPGRERPEQVLPIPDGPNVSPPVALAHSHCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWSATCDTLVAARWEQAHQSGTDSQQQSALDEEVARLEQQKGWLRETFSHVFYGQDNDGTAAAVPAGGALVARTPRHLVLQDRILAGRTGENAGAACGLAVLQGVGGXXXXXXXXXXXXXXXVVLAVAYREGWVDIALVPAGVSPRWSERAGQRVSCAAAAAGGSGGETSGAVLESLDLAERVEDKTARRRQGLSLSAGGSASWTLLAATPCRVASVTVTWAGRIQRAAERARERAAQDRPGTNSSSGSGRLDGDLRAVLRERPDSQVNEVLFVPRCSSGRIVGVVPVDSPIVGHLAMARLAGGHVEMVNVGVMTLQA-----TEVASAAKRAEAQDTPGRGDMLPRFEAALQKAKKDIGELQANRPLALAAGHLKMSQLDQKGVRVVEEQADRLVDGGVVVLEKLHLKM 727
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig122.1852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL20_ECTSI0.000e+093.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 366..386
NoneNo IPR availableCOILSCoilCoilcoord: 683..703
IPR037700Nucleoporin NUP88/NUP82PANTHERPTHR13257NUCLEOPORIN NUP84-RELATEDcoord: 127..638

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig122contigEcto-sp13_S_contig122:31762..37832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig122.1852.1mRNA_Ecto-sp13_S_contig122.1852.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig122 31636..37832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig122.1852.1 ID=prot_Ecto-sp13_S_contig122.1852.1|Name=mRNA_Ecto-sp13_S_contig122.1852.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=748bp
MAMNTTPRRGSSTAASQMQLVLRSASLHPPPTTSLDAAASSSSGATASVV
ASELMAVSVGLDLAMLCESNTIRAVSLLDVPDAAAHAPSGSIIRTPSSAQ
QRREDDPFHTVSFSADCAPRPGDDIIPSDSIPPKTPIKGLQFSPSGHSLL
IWGESYVAVARLPRTARTTSGSNPTHGVPPATPFLSPPRDLTASGRRPGM
AGGDGSSGDRSARWKWTLVDMSGYAVDVMRQRIVHAAWHPASDGCVTLLT
AGKDDVYVAVAGVGAKAFVMLHVPGRERPEQVLPIPDGPNVSPPVALAHS
HCPGWQRFTIWIAKKDGSVGALCPVVPQTAKVDSEELVGLWSATCDTLVA
ARWEQAHQSGTDSQRQSALDEEVARLEQQKAWLRETFSHVFDGQDNDGTA
TTVLAGGALVARTPRHLVLQDRILAGRTGENAGAACGLAVLQGVGGGAGG
DAAEAAAAPAPVVLAVAYREGWVDIALVPADVSPRWSERAGQCVSCAAAA
AGGEGETSGAVLESLDLAERLEDKTARRRQGLSLSAGGSAPWTLLAATPC
RVASVTVTWAGRIQRAAERARERAAQDRPGTNRTSGGGRLDGDLRAVLRE
RPDSQVNEVLFVPRCSSGRIVGVVPVDSPIVGHLAMARLAGGHVEMVNVG
VMTLQASMSCATEVASAAKRAEAQHTPGRGDMLPRFEAALQKAKKDIGEL
QANRPLALAAGHLKMSQLDQNGVRVVEEEADRLVDGGVVVLEKLHLKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037700NUP88/NUP82