prot_Ecto-sp13_S_contig7350.18521.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7350.18521.1
Unique Nameprot_Ecto-sp13_S_contig7350.18521.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length687
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7350.18521.1 vs. uniprot
Match: A0A6H5JMF7_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF7_9PHAE)

HSP 1 Score: 415 bits (1067), Expect = 2.290e-131
Identity = 249/332 (75.00%), Postives = 265/332 (79.82%), Query Frame = 0 
Query:   64 MTVLEAELETLSVDEAAYTAGDGGRTEGGGSCNNSSSRDIESYKSCLEAMLDEHYDALGDVDHNINTSIPTSLLDTITKASSTAAPITISEEGCSGAFRPVEVSTMLGVLPGLMVERGPLLSTAATMTARRSSTAAGERQAVSSGAGDVGGGVGSGADGGASAATIKPASQGGDGSRTIPSLRRGTANSSDDVANDASDRKDQRFSQTSSSRSNGNNHAISQPLEAPQHQIRQGAPVAADGGAVNPYAVPPASRSAGRSTDS---SATTTPFPPSNVRGVGRTPVQGFPGSEGAGLDGGERRSSPSNGYENRAPPGDVGAGGRNVFGGPSSG 392
            MTVLEAELETLSVD+AA TAG+GGRTEGGGS NNSS+RD ESYKSCLEAMLDEHYDAL D DHNI TSIPTSLL+TI KASSTA PITISEEGCS AFRPVEVSTML VLPGLMVER PLL+                 Q V+S A       GSGA+GG SAA+ KP S GGD SRTIPSLRRG A+SSDDV NDA+DRKD+RF   SSS+SNGNNHAIS+PL  PQHQIR GA VAADGG VNPYAVPPASRSAGRST+S   SATTTPFPPSNVRGV RTPVQGFPGS GAG DGGERRSS SNG E+RAPPGD+ AG R   GG  SG
Sbjct:    1 MTVLEAELETLSVDQAASTAGNGGRTEGGGSRNNSSARDRESYKSCLEAMLDEHYDALDDADHNITTSIPTSLLETIIKASSTAPPITISEEGCSDAFRPVEVSTMLAVLPGLMVERDPLLTXXXXXXXXXXXXXXXXGQTVASRAXXXXXXXGSGAEGGTSAASTKPVSHGGDASRTIPSLRRGNASSSDDVTNDAADRKDRRFPPISSSKSNGNNHAISRPLGKPQHQIRHGASVAADGGPVNPYAVPPASRSAGRSTNSINSSATTTPFPPSNVRGVARTPVQGFPGSGGAGSDGGERRSSTSNGCESRAPPGDLDAGAR---GGGGSG 329
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7350.18521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JMF7_9PHAE2.290e-13175.00AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7350contigEcto-sp13_S_contig7350:2556..7206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7350.18521.1mRNA_Ecto-sp13_S_contig7350.18521.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7350 2452..7208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7350.18521.1 ID=prot_Ecto-sp13_S_contig7350.18521.1|Name=mRNA_Ecto-sp13_S_contig7350.18521.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=687bp
MFCNDRSNMHVGISSEVCRARYDHIAFAQGSSSDSSSSNSSSGSSTGNAS
SCRERRWLLELGAMTVLEAELETLSVDEAAYTAGDGGRTEGGGSCNNSSS
RDIESYKSCLEAMLDEHYDALGDVDHNINTSIPTSLLDTITKASSTAAPI
TISEEGCSGAFRPVEVSTMLGVLPGLMVERGPLLSTAATMTARRSSTAAG
ERQAVSSGAGDVGGGVGSGADGGASAATIKPASQGGDGSRTIPSLRRGTA
NSSDDVANDASDRKDQRFSQTSSSRSNGNNHAISQPLEAPQHQIRQGAPV
AADGGAVNPYAVPPASRSAGRSTDSSATTTPFPPSNVRGVGRTPVQGFPG
SEGAGLDGGERRSSPSNGYENRAPPGDVGAGGRNVFGGPSSGPVLSQGRS
RHQHHQQHQQHQHHHQQHHQQQHQQQTTPRYGDRNPARGALLPAGGGGGR
DPHATADAWAARDPTPVRGGLYEAGGGMGPGRSSSSSSSITGTVHSRPPE
SSELRTSLRVEVEVAAAAATTPRGEEEGSSSEVGTGEIAGEGERGAAVAP
AEIRDTVLAVAATATSTAAPSTITVTAGTAAAAALTTRRTRGGDRDLPSP
PGYPTGPASFENGSSFPQDGLITTTTTTTTAEASSPDQPLLVHEGAAARA
VARAQAVAAAAERMARRNCRRSCSTSKRPWWRRFCR*
back to top