mRNA_Ecto-sp13_S_contig735.18520.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: D7G6P7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P7_ECTSI) HSP 1 Score: 286 bits (731), Expect = 1.540e-88 Identity = 150/172 (87.21%), Postives = 154/172 (89.53%), Query Frame = 1
Query: 19 GVEVSMVSRGDSTLRGHFPSDLVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKAS-----------PPAATERVVSVSLRDLREGGPAVVRKRLGEAKGGCVVVNAVEERDLQV 501
GVEVSMVSRGDSTLRGHFPSDLVSLETGMR VQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPG GTD D+AVALVPAGETEFARDKAFGYRSSNL+DWIREKAS PPAATERVVSVSLRDLREGGP VVR+RLGEAKGGCVVVNAVE+RDLQV
Sbjct: 148 GVEVSMVSRGDSTLRGHFPSDLVSLETGMR---VQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGLGTDSTDDAVALVPAGETEFARDKAFGYRSSNLIDWIREKASVAEADEGRWRQPPAATERVVSVSLRDLREGGPEVVRERLGEAKGGCVVVNAVEKRDLQV 316
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: A0A7C4MXH1_9DELT (Uncharacterized protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7C4MXH1_9DELT) HSP 1 Score: 138 bits (348), Expect = 8.900e-36 Identity = 77/158 (48.73%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 31 SMVSRGDSTLRGHFPSDLVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKASPPAATERVVSVSLRDLREGGPAVVRKRLGEAKGGCV-VVNAVEERDLQV 501
++VSR DSTLRGHFP ++ +L +G+ GE D WIV+PFF GGR T GD H+VE+ G LVPA ETEFARD FGYRSSNL DW+ EKA +++ V+S+S+ D+R GGP + +RL KG V VVNA RD++V
Sbjct: 103 AVVSRSDSTLRGHFPGEVDALASGL-GENF--DGWIVIPFFLEGGRYTLGDTHYVEEGGW------------------LVPAAETEFARDNVFGYRSSNLRDWVEEKAGGRVSSKDVLSISIEDVRMGGPDAITERLMTLKGSSVCVVNAAGYRDVEV 239
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: A0A3N5W0N7_9CHLR (SBD_N domain-containing protein (Fragment) n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5W0N7_9CHLR) HSP 1 Score: 132 bits (332), Expect = 7.160e-35 Identity = 71/162 (43.83%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 19 GVEVSMVSRGDSTLRGHFPSDLVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKASPPAATERVVSVSLRDLREGGPAVVRKRL-GEAKGGCVVVNAVEERDLQV 501
G E++++SR DSTLRGHFPS++ +LE G + AW++VPFF GR T D+H+V + LVPAG+TEFA DK FGYRSSNL +W EK++ + V S+S+ DLR+GGP + +RL +G VVNA RDL+V
Sbjct: 127 GRELTLISRSDSTLRGHFPSEVSALEKGFQEN---FSAWLIVPFFPESGRFTIDDIHYVA------------------DGEWLVPAGQTEFAGDKVFGYRSSNLREWAAEKSNGAVSAAEVASISIEDLRQGGPQIAAERLLALPQGAFCVVNAASYRDLEV 267
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: A0A1E3AW62_9FIRM (Uncharacterized protein n=8 Tax=Lachnospiraceae TaxID=186803 RepID=A0A1E3AW62_9FIRM) HSP 1 Score: 135 bits (341), Expect = 2.190e-34 Identity = 80/162 (49.38%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 19 GVEVSMVSRGDSTLRGHFPSDLVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKASPPAATERVVSVSLRDLREGGPA-VVRKRLGEAKGGCVVVNAVEERDLQV 501
GVE VSRGDSTLRGH+P++ SL G+ GE D ++ PFF+ GGR TAGDVH+VE G LVPAGETEFA+D +FGY SS+L DW+ EK+ E VVSVSL +LRE V K +G G VVVNAV DL+V
Sbjct: 160 GVEFLFVSRGDSTLRGHYPAETESLREGLEGEGGCVDGEVICPFFEEGGRFTAGDVHYVEMGGGR-----------------LVPAGETEFAKDSSFGYVSSDLKDWVEEKSGGKVKREDVVSVSLEELREYRIGEVADKLMGVEHFGKVVVNAVSYEDLKV 304
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: A0A3A5A2Q2_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A5A2Q2_9DELT) HSP 1 Score: 132 bits (333), Expect = 1.520e-33 Identity = 73/164 (44.51%), Postives = 98/164 (59.76%), Query Frame = 1
Query: 19 GVEVSMVSRGDSTLRGHFPSDLVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKASPPAATERVVSVSLRDLREGGP---AVVRKRLGEAKGGCVVVNAVEERDLQV 501
G + +VSR DSTLRGHFP ++ SL + E +D WI+ PFF GGR T GD+H+VE+QG LVPAG+TEFARD+ FGYRSSNL +W+ EK + + V S++L+DLR+GGP + K LG + +VNA RD++V
Sbjct: 110 GRDYVVVSRSDSTLRGHFPGEVESLAEAVGRE---YDGWIINPFFLEGGRYTIGDIHYVEEQGR------------------LVPAGQTEFARDRVFGYRSSNLREWVEEKTAGRIRSHEVASITLKDLRKGGPDRVTQILKALG--RNAPCIVNAASYRDMEV 250
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: X0RZW0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0RZW0_9ZZZZ) HSP 1 Score: 130 bits (326), Expect = 4.570e-33 Identity = 72/156 (46.15%), Postives = 96/156 (61.54%), Query Frame = 1
Query: 37 VSRGDSTLRGHFPSDLVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKASPPAATERVVSVSLRDLREGGPAVVRKRLGEAKGGCV-VVNAVEERDLQV 501
VSR DSTLRGHFP ++ +L + G++ D WI++PFF GGR T GD+H+V++ G LVPAGETE+ARD FGYRSSNL W+ EK ++ VVS+S++D+R+GGP V+ L GG + VVNA RDL+V
Sbjct: 132 VSRSDSTLRGHFPGEVEALAQAL-GQSF--DGWIIIPFFLGGGRYTVGDIHYVDEGGW------------------LVPAGETEYARDSTFGYRSSNLRHWVEEKTEGRISSGDVVSISIKDIRQGGPERVKACLLGITGGKICVVNATGYRDLEV 266
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: M3ARI5_PSEFD (Uncharacterized protein n=1 Tax=Pseudocercospora fijiensis (strain CIRAD86) TaxID=383855 RepID=M3ARI5_PSEFD) HSP 1 Score: 130 bits (327), Expect = 1.240e-32 Identity = 77/164 (46.95%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 19 GVEVSMVSRGDSTLRGHFP--SDLVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKASPPAATERVVSVSLRDLREGGPAVVRKR-LGEAKGGCVVVNAVEERDLQV 501
G + +V R DSTLRGHFP +D+VS G + D WI+ PFF GGR T DVH+VE++G LVPAGET+FARD FGY+ SNL DW+ EK+ ERVVS+ L D+R GGP VR+ +G KG VVVNA E D+ V
Sbjct: 118 GEKFEIVLRSDSTLRGHFPLEADVVSEILG------EADLWILAPFFLQGGRYTISDVHYVEEEGV------------------LVPAGETQFARDATFGYQESNLRDWVVEKSGGRILRERVVSLGLEDVRVGGPERVRELVMGFEKGSVVVVNAASESDMDV 257
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: A0A3M1JE11_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1JE11_9CHLR) HSP 1 Score: 130 bits (326), Expect = 1.500e-32 Identity = 72/162 (44.44%), Postives = 93/162 (57.41%), Query Frame = 1
Query: 19 GVEVSMVSRGDSTLRGHFPSDLVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKASPPAATERVVSVSLRDLREGGPA-VVRKRLGEAKGGCVVVNAVEERDLQV 501
G E ++VSR DSTLRGHFP ++ +L + + D WI+ PFF GGR T D+H+V + L PAGETEFA+D AFGYR+SNL W+ EK + VVS+++ D+R GGPA V +K LG K VVVNA RDL+V
Sbjct: 111 GTEFAVVSRSDSTLRGHFPGEVEALAHSL---PTRFDGWIINPFFLEGGRYTINDIHYVAE------------------GDVLTPAGETEFAKDAAFGYRASNLRRWVEEKTGGKISAGAVVSITIDDVRRGGPARVAKKLLGVEKDSVVVVNAAGYRDLEV 251
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: K2SAL9_MACPH (Uncharacterized protein n=2 Tax=Botryosphaeriaceae TaxID=45131 RepID=K2SAL9_MACPH) HSP 1 Score: 130 bits (326), Expect = 1.680e-32 Identity = 74/157 (47.13%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 34 MVSRGDSTLRGHFPSDLVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKASPPAATERVVSVSLRDLREGGPA-VVRKRLGEAKGGCVVVNAVEERDLQV 501
+V RGDSTLRGHFP + ++ + G DAW++ PFF GGR T GDVH+V + T LVPAGET FARD FGY SS+L DW+ EK A ERVVS+ L+D+REGGP +V G KG +VVNA E D+ V
Sbjct: 121 VVLRGDSTLRGHFPEEPEVVDEVLGGS----DAWVLAPFFLQGGRYTIGDVHYVAEGDT------------------LVPAGETPFARDATFGYASSDLRDWVVEKTGGKIARERVVSLGLQDIREGGPERIVELVEGFEKGSIIVVNAAAEEDMDV 255
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Match: A0A1J9RPE5_9PEZI (Putative oxidoreductase ygbj protein n=3 Tax=Botryosphaeriaceae TaxID=45131 RepID=A0A1J9RPE5_9PEZI) HSP 1 Score: 130 bits (326), Expect = 1.800e-32 Identity = 76/163 (46.63%), Postives = 95/163 (58.28%), Query Frame = 1
Query: 22 VEVSMVSRGDSTLRGHFPSD--LVSLETGMRGETVQHDAWIVVPFFKAGGRITAGDVHFVEQQGTTAATPPGSGTDHDDNAVALVPAGETEFARDKAFGYRSSNLVDWIREKASPPAATERVVSVSLRDLREGGPAVVRKRL-GEAKGGCVVVNAVEERDLQV 501
V +V RGDSTLRGHFP + +V E G G DAW++ PFF GGR T DVH+V + T LVPAGET FARD FGYRSS+L DW+ EK++ A ERVVS+ L D+R+GGP + + + G KG +VVNA E D+ V
Sbjct: 122 VPFEVVLRGDSTLRGHFPDEPEVVDEEVGGGGS----DAWVLAPFFLQGGRYTIDDVHYVAEGDT------------------LVPAGETPFARDATFGYRSSDLRDWVVEKSAGKIARERVVSLGLGDIRQGGPERIAQLVEGFEKGSVIVVNAAAEEDMDV 262 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig735.18520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig735.18520.1 >prot_Ecto-sp13_S_contig735.18520.1 ID=prot_Ecto-sp13_S_contig735.18520.1|Name=mRNA_Ecto-sp13_S_contig735.18520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=169bp AIVFSQGVEVSMVSRGDSTLRGHFPSDLVSLETGMRGETVQHDAWIVVPFback to top mRNA from alignment at Ecto-sp13_S_contig735:20843..22022+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig735.18520.1 ID=mRNA_Ecto-sp13_S_contig735.18520.1|Name=mRNA_Ecto-sp13_S_contig735.18520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1180bp|location=Sequence derived from alignment at Ecto-sp13_S_contig735:20843..22022+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig735:20843..22022+ >mRNA_Ecto-sp13_S_contig735.18520.1 ID=mRNA_Ecto-sp13_S_contig735.18520.1|Name=mRNA_Ecto-sp13_S_contig735.18520.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=507bp|location=Sequence derived from alignment at Ecto-sp13_S_contig735:20843..22022+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |