mRNA_Ecto-sp13_S_contig735.18518.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: D7G6P5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P5_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 3.240e-139 Identity = 195/200 (97.50%), Postives = 197/200 (98.50%), Query Frame = 1
Query: 1 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
MKIFQALILGMATVAGTVSADADVTDVT+RVYFDISI G EAGRITMGLFG AVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKF+DEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL
Sbjct: 1 MKIFQALILGMATVAGTVSADADVTDVTHRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 200
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A835ZLK1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLK1_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.190e-88 Identity = 134/200 (67.00%), Postives = 158/200 (79.00%), Query Frame = 1
Query: 1 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
MK+ L L + V+ ++A V VT V+FD+ I GK GRI MGL+G+AVPKTVENFR LCTGE G GKVY KPL YKGS+FHR+IPQFMLQGGDFTHGTGTGGESIYGGKF+DEAFP EL H +PG+LSMAN+G +TNGSQFFI TV TPWL+GKHVIFG+V E M++V IEKLGS+SG KV++ DSGE+
Sbjct: 1 MKLCGVLALVLCAVSSVMAA---VDSVTKMVFFDMEIDGKPGGRIVMGLYGEAVPKTVENFRALCTGEKGVGKVYHKPLTYKGSSFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPKELKHKEPGMLSMANAGPNTNGSQFFITTVATPWLDGKHVIFGKVLE-GMDVVKSIEKLGSQSGRPQAKVKVADSGEI 196
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A5C5WTT8_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rubripirellula amarantea TaxID=2527999 RepID=A0A5C5WTT8_9BACT) HSP 1 Score: 242 bits (618), Expect = 1.340e-78 Identity = 123/176 (69.89%), Postives = 142/176 (80.68%), Query Frame = 1
Query: 76 DVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELK 603
+VT++VYFD+SI GKEAGRITMGLFGK VP+TVENFR LCTGEAG PLHYKGS FHRVIP FMLQGGDFT G GTGGESIYG KF+DEAF +H+ PG+LSMAN+G++TNGSQFFI TVPTP LNG+HV+FG+V + M LV +IE LGS+SGA K+ I D GELK
Sbjct: 30 EVTHKVYFDVSIDGKEAGRITMGLFGKDVPQTVENFRALCTGEAGKTDS-GVPLHYKGSVFHRVIPNFMLQGGDFTAGNGTGGESIYGEKFDDEAFT--FVHNMPGILSMANAGRNTNGSQFFITTVPTPHLNGRHVVFGKVID-GMALVKKIESLGSQSGATRAKIVIADCGELK 201
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A7S1FIF5_NOCSC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIF5_NOCSC) HSP 1 Score: 239 bits (611), Expect = 1.080e-77 Identity = 121/179 (67.60%), Postives = 143/179 (79.89%), Query Frame = 1
Query: 64 ADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
A+ VT++V+FDI++ G++AGRI MGL+G VPKTVENFR LCTGE G GK KPLHYKGS FHRVIP FMLQGGDFTHGTGTGGESIYG KF DE F +L H PG LSMAN+GK+TNGSQFFI TV T WL+GKHV+FG+V E M++V ++E +GS+SG S+ VEI DSGEL
Sbjct: 16 AEDPKVTHKVFFDITLDGEDAGRIVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTHGTGTGGESIYGSKFNDENF--QLKHTAPGKLSMANAGKNTNGSQFFITTVTTSWLDGKHVVFGEVLE-GMDIVQKVEAVGSQSGKTSKLVEIKDSGEL 190
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A2P6VIM7_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VIM7_9CHLO) HSP 1 Score: 240 bits (613), Expect = 1.110e-77 Identity = 127/200 (63.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query: 1 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
M ++ +L +A SA A +TN+V+FD+ I GK AGRI MGLFGK VPKTVENFR LCTGE G GK KPLHYKGS FHRVIPQFMLQGGDFTHGTGTGGESIYG KF DE F +L H PG LSMAN+G DTNGSQFFI TV T WL+G+HV+FG+V E +++V ++E GS+SG KV I DSGEL
Sbjct: 1 MLCARSALLTLALALFAASAAAKGPAITNKVFFDVEIDGKPAGRIVMGLFGKTVPKTVENFRALCTGEKGVGKS-GKPLHYKGSVFHRVIPQFMLQGGDFTHGTGTGGESIYGEKFADENF--KLKHKGPGYLSMANAGADTNGSQFFITTVKTAWLDGRHVVFGKVIE-GLDVVYKVEAEGSQSGKTKSKVIIADSGEL 196
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: I6Y9L2_LINUS (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Linum usitatissimum TaxID=4006 RepID=I6Y9L2_LINUS) HSP 1 Score: 238 bits (607), Expect = 7.440e-77 Identity = 121/198 (61.11%), Postives = 147/198 (74.24%), Query Frame = 1
Query: 7 IFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
++ AL+ G + +D + ++T++VYFD+ I GK AGRITMGL+GKAVPKT ENFR LCTGE G GK KPLHYKGS+FHR+IP FMLQGGDFTHG G GGESIYG KF DE F +L H PG+LSMAN+GKDTNGSQFFI TV T WL+G+HV+FG+V M++V ++E G +SG KV I DSGEL
Sbjct: 11 LWGALLFGTLALIQAKKSDEKLKEITHKVYFDVEIDGKPAGRITMGLYGKAVPKTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRIIPSFMLQGGDFTHGDGRGGESIYGEKFADENF--KLKHTGPGLLSMANAGKDTNGSQFFITTVTTSWLDGRHVVFGKVLS-GMDVVYKVEAEGKQSGTPKSKVVIVDSGEL 204
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A5J9T8K8_9POAL (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9T8K8_9POAL) HSP 1 Score: 238 bits (607), Expect = 1.110e-76 Identity = 123/198 (62.12%), Postives = 148/198 (74.75%), Query Frame = 1
Query: 7 IFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
++ AL T+A ++A++T+VTN+VYFDI I GK AGR+ MGLFGK VPKT ENFR LCTGE G GK KPLHYKGSAFHR+IP FM+QGGDFT G G GGESIYG KF DE F ++ H PG+LSMAN+GKDTNGSQFFI TV T WL+GKHV+FG+V M+++ ++E G +SGA KV I DSGEL
Sbjct: 23 LWLALAAAALTLAQAKKSNAELTEVTNKVYFDIEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGMGKS-GKPLHYKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGLKFADENF--KIKHTGPGLLSMANAGKDTNGSQFFITTVTTSWLDGKHVVFGKVLS-GMDVIYKVEAEGRQSGAPKSKVVIADSGEL 216
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A5M6DP28_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Roseiconus nitratireducens TaxID=2605748 RepID=A0A5M6DP28_9BACT) HSP 1 Score: 237 bits (604), Expect = 1.920e-76 Identity = 124/180 (68.89%), Postives = 140/180 (77.78%), Query Frame = 1
Query: 64 ADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELK 603
A+ VT++VYFDI I G+ AGRI MGLFGK VPKTVENFR L TGE G G+ KPLHYKGSAFHRVIP FMLQGGDFT G GTGGESIYG KF DE F + HD PG+LSMAN+G +TNGSQFFI TVPTPWL+GKHVIFG+V E M++V RIE+LG+ SG + I DSGELK
Sbjct: 26 AENAPVTDKVYFDIEINGEPAGRIVMGLFGKDVPKTVENFRALATGEKGKGQS-GKPLHYKGSAFHRVIPDFMLQGGDFTRGDGTGGESIYGAKFADEKFAYK--HDVPGLLSMANAGPNTNGSQFFITTVPTPWLDGKHVIFGRVIE-GMDVVKRIEQLGTSSGRTRLPIVIADSGELK 201
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A5B9PD91_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9PD91_9BACT) HSP 1 Score: 239 bits (609), Expect = 2.370e-76 Identity = 124/183 (67.76%), Postives = 141/183 (77.05%), Query Frame = 1
Query: 55 SADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELK 603
+ADA VT ++VYFDI I GK AGRITMGLFG VPKTVENFR LCTGE G GK KPLHYK S FHRVIPQFMLQGGDFT+ GTGGESIYG KF DE F ++HD PG+LSMAN+G +TNGSQFFI TVPT WLNGKHV+FG+V + M+LV +IE GSR+G S + I D GE+K
Sbjct: 53 AADAKVT---HKVYFDIEINGKAAGRITMGLFGDDVPKTVENFRALCTGEKGKGKS-GKPLHYKDSIFHRVIPQFMLQGGDFTNANGTGGESIYGEKFNDEKFG--IVHDVPGILSMANAGPNTNGSQFFITTVPTAWLNGKHVVFGRVTD-GMDLVKKIEARGSRTGRTSAIIRIADCGEIK 228
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 n=15 Tax=Brassicaceae TaxID=3700 RepID=CP19D_ARATH) HSP 1 Score: 236 bits (603), Expect = 2.560e-76 Identity = 119/184 (64.67%), Postives = 141/184 (76.63%), Query Frame = 1
Query: 49 TVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
++ A D+ +VT++VYFD+ I GK AGR+ +GLFGKAVPKT ENFR LCTGE G GK KPLHYKGS FHR+IP FM+QGGDFTHG G GGESIYG KF DE F +L H PGVLSMANSG+DTNGSQFFI TV T WL+G+HV+FG+V + M++V +IE G +SG KV I DSGEL
Sbjct: 20 SIQAKEDLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKS-GKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENF--KLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQ-GMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig735.18518.1 >prot_Ecto-sp13_S_contig735.18518.1 ID=prot_Ecto-sp13_S_contig735.18518.1|Name=mRNA_Ecto-sp13_S_contig735.18518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFback to top mRNA from alignment at Ecto-sp13_S_contig735:5268..9104- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig735.18518.1 ID=mRNA_Ecto-sp13_S_contig735.18518.1|Name=mRNA_Ecto-sp13_S_contig735.18518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig735:5268..9104- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig735:5268..9104- >mRNA_Ecto-sp13_S_contig735.18518.1 ID=mRNA_Ecto-sp13_S_contig735.18518.1|Name=mRNA_Ecto-sp13_S_contig735.18518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp13_S_contig735:5268..9104- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |