mRNA_Ecto-sp13_S_contig735.18518.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig735.18518.1
Unique NamemRNA_Ecto-sp13_S_contig735.18518.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: D7G6P5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P5_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 3.240e-139
Identity = 195/200 (97.50%), Postives = 197/200 (98.50%), Query Frame = 1
Query:    1 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
            MKIFQALILGMATVAGTVSADADVTDVT+RVYFDISI G EAGRITMGLFG AVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKF+DEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL
Sbjct:    1 MKIFQALILGMATVAGTVSADADVTDVTHRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 200          
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A835ZLK1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLK1_9STRA)

HSP 1 Score: 268 bits (684), Expect = 1.190e-88
Identity = 134/200 (67.00%), Postives = 158/200 (79.00%), Query Frame = 1
Query:    1 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
            MK+   L L +  V+  ++A   V  VT  V+FD+ I GK  GRI MGL+G+AVPKTVENFR LCTGE G GKVY KPL YKGS+FHR+IPQFMLQGGDFTHGTGTGGESIYGGKF+DEAFP EL H +PG+LSMAN+G +TNGSQFFI TV TPWL+GKHVIFG+V E  M++V  IEKLGS+SG    KV++ DSGE+
Sbjct:    1 MKLCGVLALVLCAVSSVMAA---VDSVTKMVFFDMEIDGKPGGRIVMGLYGEAVPKTVENFRALCTGEKGVGKVYHKPLTYKGSSFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPKELKHKEPGMLSMANAGPNTNGSQFFITTVATPWLDGKHVIFGKVLE-GMDVVKSIEKLGSQSGRPQAKVKVADSGEI 196          
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A5C5WTT8_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rubripirellula amarantea TaxID=2527999 RepID=A0A5C5WTT8_9BACT)

HSP 1 Score: 242 bits (618), Expect = 1.340e-78
Identity = 123/176 (69.89%), Postives = 142/176 (80.68%), Query Frame = 1
Query:   76 DVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELK 603
            +VT++VYFD+SI GKEAGRITMGLFGK VP+TVENFR LCTGEAG       PLHYKGS FHRVIP FMLQGGDFT G GTGGESIYG KF+DEAF    +H+ PG+LSMAN+G++TNGSQFFI TVPTP LNG+HV+FG+V +  M LV +IE LGS+SGA   K+ I D GELK
Sbjct:   30 EVTHKVYFDVSIDGKEAGRITMGLFGKDVPQTVENFRALCTGEAGKTDS-GVPLHYKGSVFHRVIPNFMLQGGDFTAGNGTGGESIYGEKFDDEAFT--FVHNMPGILSMANAGRNTNGSQFFITTVPTPHLNGRHVVFGKVID-GMALVKKIESLGSQSGATRAKIVIADCGELK 201          
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A7S1FIF5_NOCSC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIF5_NOCSC)

HSP 1 Score: 239 bits (611), Expect = 1.080e-77
Identity = 121/179 (67.60%), Postives = 143/179 (79.89%), Query Frame = 1
Query:   64 ADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
            A+   VT++V+FDI++ G++AGRI MGL+G  VPKTVENFR LCTGE G GK   KPLHYKGS FHRVIP FMLQGGDFTHGTGTGGESIYG KF DE F  +L H  PG LSMAN+GK+TNGSQFFI TV T WL+GKHV+FG+V E  M++V ++E +GS+SG  S+ VEI DSGEL
Sbjct:   16 AEDPKVTHKVFFDITLDGEDAGRIVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTHGTGTGGESIYGSKFNDENF--QLKHTAPGKLSMANAGKNTNGSQFFITTVTTSWLDGKHVVFGEVLE-GMDIVQKVEAVGSQSGKTSKLVEIKDSGEL 190          
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A2P6VIM7_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VIM7_9CHLO)

HSP 1 Score: 240 bits (613), Expect = 1.110e-77
Identity = 127/200 (63.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query:    1 MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
            M   ++ +L +A      SA A    +TN+V+FD+ I GK AGRI MGLFGK VPKTVENFR LCTGE G GK   KPLHYKGS FHRVIPQFMLQGGDFTHGTGTGGESIYG KF DE F  +L H  PG LSMAN+G DTNGSQFFI TV T WL+G+HV+FG+V E  +++V ++E  GS+SG    KV I DSGEL
Sbjct:    1 MLCARSALLTLALALFAASAAAKGPAITNKVFFDVEIDGKPAGRIVMGLFGKTVPKTVENFRALCTGEKGVGKS-GKPLHYKGSVFHRVIPQFMLQGGDFTHGTGTGGESIYGEKFADENF--KLKHKGPGYLSMANAGADTNGSQFFITTVKTAWLDGRHVVFGKVIE-GLDVVYKVEAEGSQSGKTKSKVIIADSGEL 196          
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: I6Y9L2_LINUS (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Linum usitatissimum TaxID=4006 RepID=I6Y9L2_LINUS)

HSP 1 Score: 238 bits (607), Expect = 7.440e-77
Identity = 121/198 (61.11%), Postives = 147/198 (74.24%), Query Frame = 1
Query:    7 IFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
            ++ AL+ G   +     +D  + ++T++VYFD+ I GK AGRITMGL+GKAVPKT ENFR LCTGE G GK   KPLHYKGS+FHR+IP FMLQGGDFTHG G GGESIYG KF DE F  +L H  PG+LSMAN+GKDTNGSQFFI TV T WL+G+HV+FG+V    M++V ++E  G +SG    KV I DSGEL
Sbjct:   11 LWGALLFGTLALIQAKKSDEKLKEITHKVYFDVEIDGKPAGRITMGLYGKAVPKTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRIIPSFMLQGGDFTHGDGRGGESIYGEKFADENF--KLKHTGPGLLSMANAGKDTNGSQFFITTVTTSWLDGRHVVFGKVLS-GMDVVYKVEAEGKQSGTPKSKVVIVDSGEL 204          
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A5J9T8K8_9POAL (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9T8K8_9POAL)

HSP 1 Score: 238 bits (607), Expect = 1.110e-76
Identity = 123/198 (62.12%), Postives = 148/198 (74.75%), Query Frame = 1
Query:    7 IFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
            ++ AL     T+A    ++A++T+VTN+VYFDI I GK AGR+ MGLFGK VPKT ENFR LCTGE G GK   KPLHYKGSAFHR+IP FM+QGGDFT G G GGESIYG KF DE F  ++ H  PG+LSMAN+GKDTNGSQFFI TV T WL+GKHV+FG+V    M+++ ++E  G +SGA   KV I DSGEL
Sbjct:   23 LWLALAAAALTLAQAKKSNAELTEVTNKVYFDIEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGMGKS-GKPLHYKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGLKFADENF--KIKHTGPGLLSMANAGKDTNGSQFFITTVTTSWLDGKHVVFGKVLS-GMDVIYKVEAEGRQSGAPKSKVVIADSGEL 216          
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A5M6DP28_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Roseiconus nitratireducens TaxID=2605748 RepID=A0A5M6DP28_9BACT)

HSP 1 Score: 237 bits (604), Expect = 1.920e-76
Identity = 124/180 (68.89%), Postives = 140/180 (77.78%), Query Frame = 1
Query:   64 ADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELK 603
            A+   VT++VYFDI I G+ AGRI MGLFGK VPKTVENFR L TGE G G+   KPLHYKGSAFHRVIP FMLQGGDFT G GTGGESIYG KF DE F  +  HD PG+LSMAN+G +TNGSQFFI TVPTPWL+GKHVIFG+V E  M++V RIE+LG+ SG     + I DSGELK
Sbjct:   26 AENAPVTDKVYFDIEINGEPAGRIVMGLFGKDVPKTVENFRALATGEKGKGQS-GKPLHYKGSAFHRVIPDFMLQGGDFTRGDGTGGESIYGAKFADEKFAYK--HDVPGLLSMANAGPNTNGSQFFITTVPTPWLDGKHVIFGRVIE-GMDVVKRIEQLGTSSGRTRLPIVIADSGELK 201          
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: A0A5B9PD91_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mariniblastus fucicola TaxID=980251 RepID=A0A5B9PD91_9BACT)

HSP 1 Score: 239 bits (609), Expect = 2.370e-76
Identity = 124/183 (67.76%), Postives = 141/183 (77.05%), Query Frame = 1
Query:   55 SADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGELK 603
            +ADA VT   ++VYFDI I GK AGRITMGLFG  VPKTVENFR LCTGE G GK   KPLHYK S FHRVIPQFMLQGGDFT+  GTGGESIYG KF DE F   ++HD PG+LSMAN+G +TNGSQFFI TVPT WLNGKHV+FG+V +  M+LV +IE  GSR+G  S  + I D GE+K
Sbjct:   53 AADAKVT---HKVYFDIEINGKAAGRITMGLFGDDVPKTVENFRALCTGEKGKGKS-GKPLHYKDSIFHRVIPQFMLQGGDFTNANGTGGESIYGEKFNDEKFG--IVHDVPGILSMANAGPNTNGSQFFITTVPTAWLNGKHVVFGRVTD-GMDLVKKIEARGSRTGRTSAIIRIADCGEIK 228          
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 n=15 Tax=Brassicaceae TaxID=3700 RepID=CP19D_ARATH)

HSP 1 Score: 236 bits (603), Expect = 2.560e-76
Identity = 119/184 (64.67%), Postives = 141/184 (76.63%), Query Frame = 1
Query:   49 TVSADADVTDVTNRVYFDISIAGKEAGRITMGLFGKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 600
            ++ A  D+ +VT++VYFD+ I GK AGR+ +GLFGKAVPKT ENFR LCTGE G GK   KPLHYKGS FHR+IP FM+QGGDFTHG G GGESIYG KF DE F  +L H  PGVLSMANSG+DTNGSQFFI TV T WL+G+HV+FG+V +  M++V +IE  G +SG    KV I DSGEL
Sbjct:   20 SIQAKEDLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKS-GKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENF--KLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQ-GMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig735.18518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6P5_ECTSI3.240e-13997.50Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A835ZLK1_9STRA1.190e-8867.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A5C5WTT8_9BACT1.340e-7869.89Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rubrip... [more]
A0A7S1FIF5_NOCSC1.080e-7767.60Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctil... [more]
A0A2P6VIM7_9CHLO1.110e-7763.50Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micrac... [more]
I6Y9L2_LINUS7.440e-7761.11Peptidyl-prolyl cis-trans isomerase n=1 Tax=Linum ... [more]
A0A5J9T8K8_9POAL1.110e-7662.12Peptidyl-prolyl cis-trans isomerase n=1 Tax=Eragro... [more]
A0A5M6DP28_9BACT1.920e-7668.89Peptidyl-prolyl cis-trans isomerase n=2 Tax=Roseic... [more]
A0A5B9PD91_9BACT2.370e-7667.76Peptidyl-prolyl cis-trans isomerase n=1 Tax=Marini... [more]
CP19D_ARATH2.560e-7664.67Peptidyl-prolyl cis-trans isomerase CYP19-4 n=15 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig735contigEcto-sp13_S_contig735:5268..9104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score396.4
Seed ortholog evalue8.2e-108
Seed eggNOG ortholog2880.D7G6P5
Model size606
KEGG koko:K01802
Hectar predicted targeting categorysignal peptide
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564
Exons6
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0865@2759
Ec32 ortholog descriptionCyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Ec32 orthologEc-26_000140.1
EC5.2.1.8
Cds size606
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig735.18518.1prot_Ecto-sp13_S_contig735.18518.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig735 5268..9104 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464003.450455-CDS-Ecto-sp13_S_contig735:5267..53751681464003.450455-CDS-Ecto-sp13_S_contig735:5267..5375Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig735 5268..5375 -
1681464003.4617536-CDS-Ecto-sp13_S_contig735:6088..62201681464003.4617536-CDS-Ecto-sp13_S_contig735:6088..6220Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig735 6089..6220 -
1681464003.4708676-CDS-Ecto-sp13_S_contig735:7213..73031681464003.4708676-CDS-Ecto-sp13_S_contig735:7213..7303Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig735 7214..7303 -
1681464003.4866621-CDS-Ecto-sp13_S_contig735:7653..77441681464003.4866621-CDS-Ecto-sp13_S_contig735:7653..7744Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig735 7654..7744 -
1681464003.4953456-CDS-Ecto-sp13_S_contig735:8053..81601681464003.4953456-CDS-Ecto-sp13_S_contig735:8053..8160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig735 8054..8160 -
1681464003.5068276-CDS-Ecto-sp13_S_contig735:9026..91041681464003.5068276-CDS-Ecto-sp13_S_contig735:9026..9104Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig735 9027..9104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig735.18518.1

>prot_Ecto-sp13_S_contig735.18518.1 ID=prot_Ecto-sp13_S_contig735.18518.1|Name=mRNA_Ecto-sp13_S_contig735.18518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
MKIFQALILGMATVAGTVSADADVTDVTNRVYFDISIAGKEAGRITMGLF
GKAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDF
THGTGTGGESIYGGKFEDEAFPPELIHDKPGVLSMANSGKDTNGSQFFIC
TVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL
K*
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mRNA from alignment at Ecto-sp13_S_contig735:5268..9104-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig735.18518.1 ID=mRNA_Ecto-sp13_S_contig735.18518.1|Name=mRNA_Ecto-sp13_S_contig735.18518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig735:5268..9104- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATCTTCCAGGCCTTGATTCTCGGCATGGCTACTGTGGCCGGCAC CGTTAGTGCCGATGCCGACGTAACTGATGTGAGTCAAGAGTCTCTTGGGT AGTTGTTCCTTGCCGGCCCTTGGCTCTGTAGACGTACACCAAGCGCTCGC ACTTGATGACATAGCAGGCGAGAACGCTAGGGTTCCAAATTTGTACGTTT TTCAAAACATAGAACGCGGACCCGAGTTCTACAAAACCAAGATGGTGAGC CAACCGGGAACACAAGCTTTGCCGGGTTGCGCAAGATAGGTGCTGAATCG CTGGCGCTTACTACTGCAGCACATGCCCGCCTCACTTGCACTGATGTAGT ACTAGTAGAGGAGCCGCAGCAACAGCAACAGTCGGGATTTACCGGCATTC GTCTTGGTGCCTGAGCTTCTGATGACGGTGTGCAGAAGAACATGAACTAC GTGTGAGCGCCTAGTCGGAAATGGGTACGGTGAGATGCGGCTGTTTCCCG CCGGCAGGTCGCGCTGATGCACGAACGAGTCCGACGTGTGCGGAAGGGCC CAAGTGTTCCCAGATGTATTTTCCAATCGGGGGCGGGTCAGCGAGACCCT CATCTTCCTAGTCACCTATTTTCCTCCTTAATTGTACGTACTCCAGATGG ATATGTAGGGATCTTGCTGTTTCTCGCATGTAACCGGCGTGAGTCCTGTC TGTGTGTGGATCGAGCTCTTCGAAATGGCAACCGAGTGCTGTTGTTTGGC GACGTGCATCAACAATGAATGCCATCGAAAGTTGCTTCATGTCCACCGGG ATTTCGCGTGACTACGGGAAGAAGAGGCGTCGAGCACAACAGCATCTTGT TATCGTTCTATGTCGCCTTGATGACGATATGAAAGTGCCGTTGCGTCGGT CTCTTCTTGGTTGCTCGGGCTGTGTGTTGACCGATTGGCCGCAGGTGACT AACCGTGTGTACTTCGACATCAGCATCGCTGGAAAAGAGGCTGGCCGCAT CACGATGGGACTGTTCGGTAAAGCGGTACCCAAGACTGTCGAGAACTTCA GGTAAGTGTTGGTGGGTGTGCTTGGTTTTATCTAGCATCAACCACGCTAA ATCGGCTGGCCACTGAAAAGTCATCCGTCTCGTGGCGAGACAAAAACAAA CGCTTTGGCAATAGCGGTTGAGGTTATGCTGTTGCTTGTTTGCTGGAATC GGGTTGAACTGCTCTGGTATACGCACATGGCATGCGCACATTCAACCATC GACGGGAAACCCTAGCTGTTGGCGATATTCTCCGTGATTTTTCTATCGGC ACTCGGCTGACGCCACGACTCTCAACTCCGGCATTGATTGCGTGATTGAT GTCGGTTCAGGCAACTGTGCACCGGGGAGGCCGGGCCTGGCAAGGTGTAC CGAAAGCCTCTGCACTACAAGGGCTCTGCTTTCCACCGCGTCATCCCGCA GGTACGCCACTGAATGGCACAATTGCTGCTTTACATCTGCCCATTTACCA AAATTAAGTAACAAACCCAAGTTGACTGACACACATCGACGGCACAGCAC TGTATTGCTGCGCGGTCGCTTAGAACACTGCCGAACCTTTCACCAAAGTC TACCAGGCTCAGACTTCGTGGCGTCAACGTTAGGCGCAATGTCTTGGGGC TGTAGCTAGGGCTGTTGCTTGTGTTGCAGCAATGCCTCATCGAGCAAATA GCCCGGGCGTCCTCCTTGAGCTGCACTGCTGTGCTTGCTGCAGGCGCAAT TCACTGAACCAAGTTTTTTTAACACTCCTTTGGTTGCTCCGAAACATGCA GTTCATGCTCCAGGGCGGCGATTTCACGCACGGAACTGGTACGGGTGGCG AGTCCATCTACGGCGGAAAGTTTGAGGACGAAGCCTTTCCCGTGAGTACA GCAGTACAGTGCAGTGCCCCTATTATCGTACAGTCAAAACCGACACACAG CTTTGTTGACAGTTTGTAGCATCCGGAGACACACAGGGGAAAGAGGTGAT GCACGTATGTCGTTTGTTGTTTTTCTCCACTTTTCTTCTGCCGTATTTTT TTCCGAGGTGTTCTGTAGCGCGAAGGAGCCAGCCGCCCGTCTCCTTCGTA GACAATGTTAAGCCGTACCGGAGGCACCGGGTATTTAGAAGAGAATGTGG CATAACTCATGTTTCGTACCGCTGAAGATTACGACTCTCACGCATGACAC ACCTTCTCCAGAGTACAGCAGTAACGAAAGAGTCCATCTTCGGGTAATTT TGCTACTGAGTATGAGGTCAAAGACAAAAGAGCTGTCTCTTGTCTCTGCG GGGGGCCCTCCTTTGCCGACCGGACACCTTCCCAAGTTCAGCGCCACAGA TATACAAGACCAGCAGTAGTGCGTGCCCACATATGCATAATGAGACGCAT AAGTGGAAATTTTCATCATTGGTGTGGAGGGCAGCCACAGTATTCGTCGC GGTATTTCGCTATTTACTGTACGATTGCTCTGACCCAACCCTTCTGGGTT GTCTGCGAGGAATGCAGCACCATGCCGCTTTGGCGTCATGACGAAATGCG AATCAAACGCATGTACGCTCTCACAAAGACGTCGCCGCTCGTGGCAGCCT CTCACACTACACCACATCTATTTAGAGTAGTGATTTCGCGATGCATACCC CTGTGTACAACATGCAATTTGTGGGCGACGTCGCCGCTCGTGGCAGCCTC TTACACTGCACCACATCTATTTAGAGGAATGATTTCGCGATGCACATGCC TGTGTACAACCTGCAATTTGTGGGCACATACGTCCCCTTTTCTTGCTGCC GCGTACATTCTAGTAACCATGGCACGATACATTGTTTCACATTCGCATGG ACCCTTTCGCTTGCCCGCGTGTCTTGGCGGCCAGCCTGAGCTGATCCACG ACAAGCCTGGAGTTCTGTCGATGGCCAACTCTGGCAAAGACACGAACGGG TCGCAGTTCTTCATCTGCACCGTGCCTACCCCGTGGTTGAACGGCAAGCA CGTCATCTTCGGACAGGTGAATGAAAACGAGTAGAGGTGCTGGGGATCGC CAAGAGGGCGTGGAAATGAGGCGTCTATAGCCAGCACTCTACGAGAGTTT GACATGACCTCAGCACATTCTGGAACATGTGGAATATGGTAAAGGGTACA GCAGGTGCCGCATTAGGCAAGGAATAGGTACGGCACTGCACATGTCGTAA AAATCAAACATGGTGCAGCACACCAGCTTTCTGTGCCATGACAAACAACG CCAATTCAAACATCTTGGCAGTAAAGCCCTTCGACGTGGTCAAATATGGA CCGCGGTGTTCATGCCAAGGTTTCGCCGGACGCCTGCAGTCATGGGTGGT TGCCGTCGAGGGGGACAAAAAATCGAAAACGGGCAAGGCCTTGGCTGTTG TGCGTCCACGTCTGTAAATTGAAAACCCAGAACCTTCGAGGTACAGTAGA CGTCAATGGCGTTGCCGTGACCCCCCCTCCCTTGGTTTCAAGCATTTTGG GGTGTACCCTGCAGGCCGCTCTGTAATCGCTTTAAACCAGTTGTTGCTGC ATAGGCCCCTAAGTTTTTGTACTGGTACTTCGTTAGGTTGATGTGTGTTG TTTGTTGCGCCGGCGACGCCGATATGTAGCGTTGAAGATGCGGTGAAATG GGGACGAAAATAGTACTGTAAAAAGGTGGAAAACAAAAACGCGGCGTCGG CATTTTCCTTCGCGTTTGCCCTTGAACAGGTTGAGGAAGAGAGCATGGAA CTCGTGTCCAGAATCGAAAAGCTCGGCAGCAGAAGCGGAGCTCTCTCTGA AAAGGTGGAGATCACCGACTCCGGAGAGCTCAAGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig735:5268..9104-

>mRNA_Ecto-sp13_S_contig735.18518.1 ID=mRNA_Ecto-sp13_S_contig735.18518.1|Name=mRNA_Ecto-sp13_S_contig735.18518.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=606bp|location=Sequence derived from alignment at Ecto-sp13_S_contig735:5268..9104- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGATCTTCCAGGCCTTGATTCTCGGCATGGCTACTGTGGCCGGCAC
CGTTAGTGCCGATGCCGACGTAACTGATGTGACTAACCGTGTGTACTTCG
ACATCAGCATCGCTGGAAAAGAGGCTGGCCGCATCACGATGGGACTGTTC
GGTAAAGCGGTACCCAAGACTGTCGAGAACTTCAGGCAACTGTGCACCGG
GGAGGCCGGGCCTGGCAAGGTGTACCGAAAGCCTCTGCACTACAAGGGCT
CTGCTTTCCACCGCGTCATCCCGCAGTTCATGCTCCAGGGCGGCGATTTC
ACGCACGGAACTGGTACGGGTGGCGAGTCCATCTACGGCGGAAAGTTTGA
GGACGAAGCCTTTCCCCCTGAGCTGATCCACGACAAGCCTGGAGTTCTGT
CGATGGCCAACTCTGGCAAAGACACGAACGGGTCGCAGTTCTTCATCTGC
ACCGTGCCTACCCCGTGGTTGAACGGCAAGCACGTCATCTTCGGACAGGT
TGAGGAAGAGAGCATGGAACTCGTGTCCAGAATCGAAAAGCTCGGCAGCA
GAAGCGGAGCTCTCTCTGAAAAGGTGGAGATCACCGACTCCGGAGAGCTC
AAGTAG
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